GBrowse Details

Vigan.05G015100.01

Basic Information:
Name: Vigan.05G015100.01
Multiple alignment
Variant Information
Position: Chr05:954106..956769 (+ strand)
Length: 2664
Functional Information:
Description: Similar to Peroxidase. [Q9XFI7, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Peroxidases heam-ligand binding site (IPR019793)
Peroxidase, active site (IPR019794)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.38,5.07,3.24,0.26,25.88,1.81,34.00,0.62
Arabidopsis thaliana homolog: AT4G25980.1
Automatic updates:
Name: NM_001361043 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase 43 (PRX3), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr05:954106..954149 (+ strand)
Length: 44
Type: five_prime_UTR
Position: Chr05:954150..954353 (+ strand)
Length: 204
Type: CDS
Position: Chr05:954456..954638 (+ strand)
Length: 183
Type: CDS
Position: Chr05:954749..954911 (+ strand)
Length: 163
Type: CDS
Position: Chr05:956036..956460 (+ strand)
Length: 425
Type: CDS
Position: Chr05:956461..956769 (+ strand)
Length: 309
Type: three_prime_UTR

>Vigan.05G015100.01 class=Sequence position=Chr05:954106..956769 (+ strand)
CTTATAACTA GTTATATTTC ATATACAGAG TTGCACTCGC AGTGATGACG GTGCTCTTAG TTCTGTCTCT CTTATTCTTC
TCATTCTTAA TGGGTTGTTC TGATGGTCAG CTTGAGGTAG GGTTCTACTC CAACACTTGT CCTCAGGTAG ATTCCGTTGT
CCGTGACGTT GTTAGAGAAG CTGCTCTCTC TGATACCAAC ATGGCTGCTG TCTTGCTCAG ACTTCATTTT CATGACTGCT
TTGTTGAGGT CTCTCTGAAT AATATAACTG TATTATTGAT ATTTATGTAT ACATAACATG GTGCTATTTT CTTTTGGCTT
CAACGGTTGA AATGGATGGG ATAATTTCAG GGTTGTGATG GTTCAATTCT GATTGAGAAT GGTCCAGAAT CAGAGAGACA
CGCATTTGGA CATCAAGGGG TTAGAGGGTT TGATGTGATA GAAAAAGCCA AGGCAGAATT GGAAGGATCT TGTCCTGGTG
TGGTTTCTTG TGCAGACATA GTGGCATTGG CAGCTAGAGA GGCTATTGTT TTGGTACTAA CTAACTTCAT TATTATTAGT
TAATTCATGC TTTTTCTCTT GTTGCTGATG GAAGATTTTG TTCTTGTAAG TTGCAACTTA GATAATGTTT GATATGAACG
TAGGCGAATG GACCAACATA TGAAGTTCCA ACAGGGAGGA GAGATGGGTT GGTTTCAAAT GTTTCTCTTG CAGATGACAT
GCCAGATGTT AGTGATTCAA TTGAGCTACT CAAGACCAAG TTTCTGAACA AGGGTCTCAC AGTGAAAGAC CTTGTTCTTC
TCAGTGGTAC TCTCTCACAC ACTATGCTAT CTTTGTCATG CTGAATAGGT GAGAACATGG TTGTTGAAGA TGAAAAATGA
TATGAACCTT GGCAAAAAAA ACCAAATTAA AAGACCTGCT ATGGCCAAAT TACCAAACCT ATGATATGAA ACTATTTTAG
CAGATGTTAC TCTCCGCTTT ACAATACAAC GAAAGCCTGT GCCAATTTGG GAAATTGATG TTGAAGTCCT AGGAATTACC
AGAAGACAAT TTCTAATTAT ACCATAAATT ATAATAGCAT TTCTTTTGTA AGAAAGACCC AAGGAACGAA GAAAGAGAAA
TTGTGATGAA GAAGATAAAG AAAAAAGAGA GTATAACTTA TTTTGCAGAA ATTGTTTTGA AACACGATAT CTTTTGTTCA
AATATATGAT ATGAGATCAT CATCCTTTTA AGTAATCTTT TCCTTTTTTT GACAAATTTT CACCTTTCAA GAAACCTTGA
CATAACAGCT ACCACTTTAA TTTATTCATA AACTTAGTAC CTATGATTCT GAAAAGTTGC ATATGTTCCC TTTATATCTG
TTTAGTATAA TTTTTGCTAA AAGATCTATC ATGTTTTCTA TTTGATGGAT GATAAATGAT ACATGTGAGA CTTCTTTATT
TAATTTATGT CTTATCATGA GGACATATTT AATTTTATAT AGCTGTAAGA ATAGGGATTC ATTGGTATTA TTATGTGTGC
CAGCTTTCAT TTCGCTTTTC TTTTATACTT AGCTTTGGTT TCACCTAATT CATTGACCGC TTAAAGTTTC GTATCAAACC
CAATGCAAAA TTGTGGCAGA TGACAGTTCT TATCTTACAA ATGTTGCACA TGCAGAGTTA CAGTTGCAAT CCACATTAAT
TGGTATTGGT ATTGATAGAG ATATGCTTGT TTGTCCCTTT CTCTTACATA TTTATTTTGT GTATTCTGAT TAATTGAGAA
CCTATAAGTA CTAGAATTTA TGGTAAATTA GCTAGGTGAC TGTTATGACA GTGACAAATA TATGTAAGCC AGAATAATAA
GCAAGTAAAG AAAACTTGGC TTGGTTAAAG ATTGTAAAAG TTGGTGTTTT CTTTTTCGTG TAATATTGTG AGTTTTGAAA
ACAATCTCAG GTGCACATAC AATTGGAACC ACAGCATGCT TCTTTATGAC TAAAAGACTG TACAACTTTT TTCCAAGTGG
TGGAGGATCA GACCCATCAA TCAGTCCAAA TTTTCTCCCA CAGTTGCAAG CAAAGTGCCC TCAGAATGGA GATGTTAATG
TTAGGCTAGC CATTGACGAG GGCAGTGAGC AGAATTTTGA CGTACACATT CTGAAGAACA TAAAGGAAGG TTTTGCTGTG
TTAGAATCTG ATGCCAGACT CAATGATGAC ATAGCCACAA AGAATGTCAT TGACTCTTAC TTTTCTCCCT TGGGTCCAAT
GTTTGAGCCT TCTTTTGAAG CTGATTTTGT TGATTCATTC GTGAGGATGG GCCAAATTGG TGTCAAGACA GGATTCCTTG
GAGAAATCAG GACAGTGTGT TCACAATTCA ATTGAAGTAA ATAAGCAACC AATAATGAAG TGATTTATGG CTTCTGGTTT
TGTTATTTTT TAGGTGGAAA GCTTCCTCTG CTTTATATTC TAAATTCATA CGTTCTTATT GTTTGTGTTT TCAACTTCTC
AATGGGCACT TCATTTGTGT AAAGGATCAC ACCTCTAGCT TGTTTGGTTT GGGTAAATTT GTGTAAATGT TAACTGAGGT
TTAAGGTTGT TTTTTAGTTA ATGTGGGTTG ATGGAGTCCG TGGATTCAAT ATTTGCTTCA TATTGGTAAT ATCATTTTGC
CATGAATAAT GTTGCAGTGT TTAA

>Vigan.05G015100.01
CTTATAACTA GTTATATTTC ATATACAGAG TTGCACTCGC AGTGATGACG GTGCTCTTAG TTCTGTCTCT CTTATTCTTC
TCATTCTTAA TGGGTTGTTC TGATGGTCAG CTTGAGGTAG GGTTCTACTC CAACACTTGT CCTCAGGTAG ATTCCGTTGT
CCGTGACGTT GTTAGAGAAG CTGCTCTCTC TGATACCAAC ATGGCTGCTG TCTTGCTCAG ACTTCATTTT CATGACTGCT
TTGTTGAGGG TTGTGATGGT TCAATTCTGA TTGAGAATGG TCCAGAATCA GAGAGACACG CATTTGGACA TCAAGGGGTT
AGAGGGTTTG ATGTGATAGA AAAAGCCAAG GCAGAATTGG AAGGATCTTG TCCTGGTGTG GTTTCTTGTG CAGACATAGT
GGCATTGGCA GCTAGAGAGG CTATTGTTTT GGCGAATGGA CCAACATATG AAGTTCCAAC AGGGAGGAGA GATGGGTTGG
TTTCAAATGT TTCTCTTGCA GATGACATGC CAGATGTTAG TGATTCAATT GAGCTACTCA AGACCAAGTT TCTGAACAAG
GGTCTCACAG TGAAAGACCT TGTTCTTCTC AGTGGTGCAC ATACAATTGG AACCACAGCA TGCTTCTTTA TGACTAAAAG
ACTGTACAAC TTTTTTCCAA GTGGTGGAGG ATCAGACCCA TCAATCAGTC CAAATTTTCT CCCACAGTTG CAAGCAAAGT
GCCCTCAGAA TGGAGATGTT AATGTTAGGC TAGCCATTGA CGAGGGCAGT GAGCAGAATT TTGACGTACA CATTCTGAAG
AACATAAAGG AAGGTTTTGC TGTGTTAGAA TCTGATGCCA GACTCAATGA TGACATAGCC ACAAAGAATG TCATTGACTC
TTACTTTTCT CCCTTGGGTC CAATGTTTGA GCCTTCTTTT GAAGCTGATT TTGTTGATTC ATTCGTGAGG ATGGGCCAAA
TTGGTGTCAA GACAGGATTC CTTGGAGAAA TCAGGACAGT GTGTTCACAA TTCAATTGAA GTAAATAAGC AACCAATAAT
GAAGTGATTT ATGGCTTCTG GTTTTGTTAT TTTTTAGGTG GAAAGCTTCC TCTGCTTTAT ATTCTAAATT CATACGTTCT
TATTGTTTGT GTTTTCAACT TCTCAATGGG CACTTCATTT GTGTAAAGGA TCACACCTCT AGCTTGTTTG GTTTGGGTAA
ATTTGTGTAA ATGTTAACTG AGGTTTAAGG TTGTTTTTTA GTTAATGTGG GTTGATGGAG TCCGTGGATT CAATATTTGC
TTCATATTGG TAATATCATT TTGCCATGAA TAATGTTGCA GTGTTTAA

>Vigan.05G015100.01
ATGACGGTGC TCTTAGTTCT GTCTCTCTTA TTCTTCTCAT TCTTAATGGG TTGTTCTGAT GGTCAGCTTG AGGTAGGGTT
CTACTCCAAC ACTTGTCCTC AGGTAGATTC CGTTGTCCGT GACGTTGTTA GAGAAGCTGC TCTCTCTGAT ACCAACATGG
CTGCTGTCTT GCTCAGACTT CATTTTCATG ACTGCTTTGT TGAGGGTTGT GATGGTTCAA TTCTGATTGA GAATGGTCCA
GAATCAGAGA GACACGCATT TGGACATCAA GGGGTTAGAG GGTTTGATGT GATAGAAAAA GCCAAGGCAG AATTGGAAGG
ATCTTGTCCT GGTGTGGTTT CTTGTGCAGA CATAGTGGCA TTGGCAGCTA GAGAGGCTAT TGTTTTGGCG AATGGACCAA
CATATGAAGT TCCAACAGGG AGGAGAGATG GGTTGGTTTC AAATGTTTCT CTTGCAGATG ACATGCCAGA TGTTAGTGAT
TCAATTGAGC TACTCAAGAC CAAGTTTCTG AACAAGGGTC TCACAGTGAA AGACCTTGTT CTTCTCAGTG GTGCACATAC
AATTGGAACC ACAGCATGCT TCTTTATGAC TAAAAGACTG TACAACTTTT TTCCAAGTGG TGGAGGATCA GACCCATCAA
TCAGTCCAAA TTTTCTCCCA CAGTTGCAAG CAAAGTGCCC TCAGAATGGA GATGTTAATG TTAGGCTAGC CATTGACGAG
GGCAGTGAGC AGAATTTTGA CGTACACATT CTGAAGAACA TAAAGGAAGG TTTTGCTGTG TTAGAATCTG ATGCCAGACT
CAATGATGAC ATAGCCACAA AGAATGTCAT TGACTCTTAC TTTTCTCCCT TGGGTCCAAT GTTTGAGCCT TCTTTTGAAG
CTGATTTTGT TGATTCATTC GTGAGGATGG GCCAAATTGG TGTCAAGACA GGATTCCTTG GAGAAATCAG GACAGTGTGT
TCACAATTCA ATTGA

>Vigan.05G015100.01
MTVLLVLSLL FFSFLMGCSD GQLEVGFYSN TCPQVDSVVR DVVREAALSD TNMAAVLLRL HFHDCFVEGC DGSILIENGP
ESERHAFGHQ GVRGFDVIEK AKAELEGSCP GVVSCADIVA LAAREAIVLA NGPTYEVPTG RRDGLVSNVS LADDMPDVSD
SIELLKTKFL NKGLTVKDLV LLSGAHTIGT TACFFMTKRL YNFFPSGGGS DPSISPNFLP QLQAKCPQNG DVNVRLAIDE
GSEQNFDVHI LKNIKEGFAV LESDARLNDD IATKNVIDSY FSPLGPMFEP SFEADFVDSF VRMGQIGVKT GFLGEIRTVC
SQFN*