GBrowse Details

Vigan.04G409800.01

Basic Information:
Name: Vigan.04G409800.01
Multiple alignment
Variant Information
Position: Chr04:52013082..52016361 (- strand)
Length: 3280
Functional Information:
Description: Similar to Uncharacterized protein. [I1MZ17, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Isopenicillin N synthase (IPR002283)
Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.06,0.00,23.24,3.31,1.66,1.54,6.17,4.28
Arabidopsis thaliana homolog: AT5G05600.1
Automatic updates:
Name: NM_001289310 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavonol synthase/flavanone 3-hydroxylase-like (LOC100801693), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:52013082..52013386 (- strand)
Length: 305
Type: three_prime_UTR
Position: Chr04:52013387..52013635 (- strand)
Length: 249
Type: CDS
Position: Chr04:52014868..52015198 (- strand)
Length: 331
Type: CDS
Position: Chr04:52015527..52016029 (- strand)
Length: 503
Type: CDS
Position: Chr04:52016030..52016361 (- strand)
Length: 332
Type: five_prime_UTR

>Vigan.04G409800.01 class=Sequence position=Chr04:52013082..52016361 (- strand)
ATTAACTTGC ACAGCATTTC ACACACAGAA ACACCCTTTA AAAACCCACA AACTTCACGT TTTATATTAC GTCCATTTCG
CTTTTCATGC CTCCACGGTC CCACTCTCTT CTCTTCCTTT AACTTCCACC ATATCTCATC CCGACACTCT TCTTCCTCTT
CTTTCTTTCT TTCTTTGCCT CAAATTCAAA TCCATTATCT TTCTCTTCCA AGTCTCTCAA CTTTCAAATT AAAAAAATAA
CCACTTCCTT TCATACTTCA CTGTATATTT CTTCTTATAA ACACCAACCG ACCAATTACC CTGTCTAGTA TTGTACTACT
ATCTAGCTAG CAATGTCAAA AGACCAACCA GATTGGCCAG AACCTATTGT TCGGGTTCAG TCTTTATCCG AAAGCTGCTT
CGATTCAATC CCCGAAAGGT ACATCAAGCC CTCTACCGAT AGACCATCAT CCGGAAGCTC TGATTTTGAT GATGCCAACA
ACATCCCCAT CATCGACCTC GGAGGTCTCG GTGGCGTCGA CCATCATGTC TCATCCTCAA TTCTTAAGCA AATCTCAGAC
GCTTGCAAGG AGTGGGGCTT CTTCCAAATC ACAAACCATG GCGTCGATCC CGATTTGATG GACAAGGTTA GGGAAACTTG
GCGTCAATTC TTTCACTTGC CCATGGAGGT CAAGCAACAA TACGCAAACT CACCCAAAAC TTACGAAGGC TATGGAAGCA
GACTTGGAAT CGAGAAAGGT GCTATTCTTG ATTGGAGTGA TTACTATTAT CTTCACTATC TTCCCTTGGC TCTCAAGGAC
TGTAACAAAT GGCCGAACTT GCCTCCCCAA TGCAGGTAAA TTCACCACAC CATACTAAAC TTCGACAAAA CTTTACACAA
AATTCTGTTC TTAATATGCT TACTATACTA TAACTTCAAT TATGTTAGTG AGATGAAAAC CATATCATGA TGGAATTGAT
AAAACTCTAT CTCTGATTAA AGTTTTTTCC AATTAAAACC AGAGTTTCGT CTCAGTATAG TACATATACG AATTAAAATA
TTAGTAATTA TACCGAGATA TGAAGTTAGT AGTAACATCT ATATGTAAGC TCTGTCCAAA AAAGAAGACA TGAAGTTTGT
TTTGTATGTG TGGTAGTAAT TAACAGCGTA TTGTGTTATG TAGGGAAGTG TTTGATGAGT ATGGGAGAGA GTTAGTGAAG
CTGTGTGGGA GGTTGATGAA GGTTTTGTCG ATAAACCTTG GATTAGACGA AAAGACTCTT CAAAATGCTT TTGGGGGGGA
AGACATAGGG GCATGTCTGA GAGTGAATTT TTACCCTAAG TGTCCACGAC CAGAGTTAAC ACTGGGTCTC TCATCACACT
CAGACCCTGG AGGAATGACC ATGTTGCTTC CAGATGATCA AGTTCCTGGT CTTCAAGTTC GAAAATTCAA CAATTGGATT
ACTGTGAAGC CTGCACGCCA TGCTTTCATC GTTAATATTG GCGATCAAAT TCAGGTGAGT AATTTTCAAT CTCTCTGTTA
TCCATATTCA CAGATTTTTG CATTAATTTG TCACTGTTTG CATTACCATG CCCACTTAAA GAGAACACAA CACATGCGAA
GTTCAGTTGT TACTTTAGTT TTTCCTTTTT CAACTCCTTT ATCATCTTTT TGAACATTTA AGATAATTTT CCACACCACT
ATTGTCAAAG GATGAAATTA AAAATGAAGA GTTTTGTTAA TACACTCAAA TAAGAAATAT CTAAAAAAAA TGTGTGACTT
TCACTGTTTT TCAATGTATA TAAAAATGTG TTTTAACAAG CATGCTAAAA ATATGTTGTT AGCGTGTCAT ATTTTCAACC
GTTTTAATTA AAAGACTACA CAGCATTAAT CGGTTCAAAA TATTTCAGAT GTTTGCCTTT GAAATAAATA ATTGGATGAT
GATATCATTA CATTTTAATT GGATTCTTAC TTTATTATTT ACATGTTTAA TTATTTTAGA TGAATAATTT ATTCTGGAAT
AAAAACGATA ATAAGTGATA GACTTTCGTC AAGTTTACGA CATCTAAAAT ATAAATTCTG AAAACTACGC ACTTACATAA
AGTAGATAAA CATTTGACCT AAAAGGTTTA AGGATAGAGT CATAGGATTT AATGTAAAAG GGATAAGATT CCTTCATAGT
GTCGAAAAAT ATATCAAAAT GGCCCATCGA GCTAAAGGGT AAGGAGTATG CAACTTACGA TTCAGTTAAA GGTAGATAAA
GAAAAGAAAA AGAAACATAA GAAATAAAAT AAATTAACGT TGTCATTATT AGGTTTAAAG TTATAATCCT GTCATCTTTA
TCTTGTAATT TGAAACATGT TAAAATTATT TTTGGCATAT ATAAGGTCTG TGTGAAAAGG AAATACGGAA AAAGGTGAGT
TATGCTTTTT ATGTGTGTGA ACTGTAAAAA TTGCACAGTG ATGTAACTAA AAAGTGACCA ATTATACGAG GAGCATATGA
AAACAGAGTA ACCGTTGTTG GTCATGTGCA GCATCACTAT CAAATTATTT AACTGTTGAA GGCCCCATAG GCCAACATGT
TCACTCTCAC TCAACTGGAC AGGTGGAATA TTATTTAATT TGCAAAACAT GAAATGCTTT CCATCTCACA TCCTCATCAC
AATAATAACA TTATGGTTAA TTACGAAATC ATAAGACGGT GTTGGTGAAT GATTTGGTTG TTTTTTGTTT GTTTGTGTTT
GAGTAGGTAC TGAGCAATGC AATTTACAAG AGTGTGGAAC ACAGAGTGAT AGTAAACTCA GATAAGGAGA GAGTTTCTCT
GGCTTTTTTC TACAACCCGA AAAGTGATAT ACGCATAGAA CCAATAAAGG AGCTGGTAAC AGTGAATACA CCTTCACTTT
ATCCACCAAT GACCTTCGAT GAATATAGAC TCTTCATTAG AATGAGAGGA CCTCGAGGAA AATCTCAAGT TGAATCTCTA
AAGTCTCCAA AATGATTCAT TCTTCACATT CCAACTCTAT ATTTCCAAAT TTCCAAATGT AATATACAAT AATAATAATA
ATTAATAATA ATAATTAGTT TGGACCATGC TTGGTTATAA CTATTTAAGA AATAATTTAT TACTTCTCAA CTACTCCCAA
ACGTGCTACA AAATCTAGTA AAGAGATAGG TATTTGTTTG CACATTGAGG CCTTGAGCAA AGATATGATG AAATGGAGAT
TGGACATTTT GGTATGAAAT TATTTGGACA AGTTGTTTTC TTCTTTGGTT TACGATGATG TCGAAAATTT GATTGTGTCT

>Vigan.04G409800.01
ATTAACTTGC ACAGCATTTC ACACACAGAA ACACCCTTTA AAAACCCACA AACTTCACGT TTTATATTAC GTCCATTTCG
CTTTTCATGC CTCCACGGTC CCACTCTCTT CTCTTCCTTT AACTTCCACC ATATCTCATC CCGACACTCT TCTTCCTCTT
CTTTCTTTCT TTCTTTGCCT CAAATTCAAA TCCATTATCT TTCTCTTCCA AGTCTCTCAA CTTTCAAATT AAAAAAATAA
CCACTTCCTT TCATACTTCA CTGTATATTT CTTCTTATAA ACACCAACCG ACCAATTACC CTGTCTAGTA TTGTACTACT
ATCTAGCTAG CAATGTCAAA AGACCAACCA GATTGGCCAG AACCTATTGT TCGGGTTCAG TCTTTATCCG AAAGCTGCTT
CGATTCAATC CCCGAAAGGT ACATCAAGCC CTCTACCGAT AGACCATCAT CCGGAAGCTC TGATTTTGAT GATGCCAACA
ACATCCCCAT CATCGACCTC GGAGGTCTCG GTGGCGTCGA CCATCATGTC TCATCCTCAA TTCTTAAGCA AATCTCAGAC
GCTTGCAAGG AGTGGGGCTT CTTCCAAATC ACAAACCATG GCGTCGATCC CGATTTGATG GACAAGGTTA GGGAAACTTG
GCGTCAATTC TTTCACTTGC CCATGGAGGT CAAGCAACAA TACGCAAACT CACCCAAAAC TTACGAAGGC TATGGAAGCA
GACTTGGAAT CGAGAAAGGT GCTATTCTTG ATTGGAGTGA TTACTATTAT CTTCACTATC TTCCCTTGGC TCTCAAGGAC
TGTAACAAAT GGCCGAACTT GCCTCCCCAA TGCAGGGAAG TGTTTGATGA GTATGGGAGA GAGTTAGTGA AGCTGTGTGG
GAGGTTGATG AAGGTTTTGT CGATAAACCT TGGATTAGAC GAAAAGACTC TTCAAAATGC TTTTGGGGGG GAAGACATAG
GGGCATGTCT GAGAGTGAAT TTTTACCCTA AGTGTCCACG ACCAGAGTTA ACACTGGGTC TCTCATCACA CTCAGACCCT
GGAGGAATGA CCATGTTGCT TCCAGATGAT CAAGTTCCTG GTCTTCAAGT TCGAAAATTC AACAATTGGA TTACTGTGAA
GCCTGCACGC CATGCTTTCA TCGTTAATAT TGGCGATCAA ATTCAGGTAC TGAGCAATGC AATTTACAAG AGTGTGGAAC
ACAGAGTGAT AGTAAACTCA GATAAGGAGA GAGTTTCTCT GGCTTTTTTC TACAACCCGA AAAGTGATAT ACGCATAGAA
CCAATAAAGG AGCTGGTAAC AGTGAATACA CCTTCACTTT ATCCACCAAT GACCTTCGAT GAATATAGAC TCTTCATTAG
AATGAGAGGA CCTCGAGGAA AATCTCAAGT TGAATCTCTA AAGTCTCCAA AATGATTCAT TCTTCACATT CCAACTCTAT
ATTTCCAAAT TTCCAAATGT AATATACAAT AATAATAATA ATTAATAATA ATAATTAGTT TGGACCATGC TTGGTTATAA
CTATTTAAGA AATAATTTAT TACTTCTCAA CTACTCCCAA ACGTGCTACA AAATCTAGTA AAGAGATAGG TATTTGTTTG
CACATTGAGG CCTTGAGCAA AGATATGATG AAATGGAGAT TGGACATTTT GGTATGAAAT TATTTGGACA AGTTGTTTTC
TTCTTTGGTT TACGATGATG TCGAAAATTT GATTGTGTCT 

>Vigan.04G409800.01
ATGTCAAAAG ACCAACCAGA TTGGCCAGAA CCTATTGTTC GGGTTCAGTC TTTATCCGAA AGCTGCTTCG ATTCAATCCC
CGAAAGGTAC ATCAAGCCCT CTACCGATAG ACCATCATCC GGAAGCTCTG ATTTTGATGA TGCCAACAAC ATCCCCATCA
TCGACCTCGG AGGTCTCGGT GGCGTCGACC ATCATGTCTC ATCCTCAATT CTTAAGCAAA TCTCAGACGC TTGCAAGGAG
TGGGGCTTCT TCCAAATCAC AAACCATGGC GTCGATCCCG ATTTGATGGA CAAGGTTAGG GAAACTTGGC GTCAATTCTT
TCACTTGCCC ATGGAGGTCA AGCAACAATA CGCAAACTCA CCCAAAACTT ACGAAGGCTA TGGAAGCAGA CTTGGAATCG
AGAAAGGTGC TATTCTTGAT TGGAGTGATT ACTATTATCT TCACTATCTT CCCTTGGCTC TCAAGGACTG TAACAAATGG
CCGAACTTGC CTCCCCAATG CAGGGAAGTG TTTGATGAGT ATGGGAGAGA GTTAGTGAAG CTGTGTGGGA GGTTGATGAA
GGTTTTGTCG ATAAACCTTG GATTAGACGA AAAGACTCTT CAAAATGCTT TTGGGGGGGA AGACATAGGG GCATGTCTGA
GAGTGAATTT TTACCCTAAG TGTCCACGAC CAGAGTTAAC ACTGGGTCTC TCATCACACT CAGACCCTGG AGGAATGACC
ATGTTGCTTC CAGATGATCA AGTTCCTGGT CTTCAAGTTC GAAAATTCAA CAATTGGATT ACTGTGAAGC CTGCACGCCA
TGCTTTCATC GTTAATATTG GCGATCAAAT TCAGGTACTG AGCAATGCAA TTTACAAGAG TGTGGAACAC AGAGTGATAG
TAAACTCAGA TAAGGAGAGA GTTTCTCTGG CTTTTTTCTA CAACCCGAAA AGTGATATAC GCATAGAACC AATAAAGGAG
CTGGTAACAG TGAATACACC TTCACTTTAT CCACCAATGA CCTTCGATGA ATATAGACTC TTCATTAGAA TGAGAGGACC
TCGAGGAAAA TCTCAAGTTG AATCTCTAAA GTCTCCAAAA TGA

>Vigan.04G409800.01
MSKDQPDWPE PIVRVQSLSE SCFDSIPERY IKPSTDRPSS GSSDFDDANN IPIIDLGGLG GVDHHVSSSI LKQISDACKE
WGFFQITNHG VDPDLMDKVR ETWRQFFHLP MEVKQQYANS PKTYEGYGSR LGIEKGAILD WSDYYYLHYL PLALKDCNKW
PNLPPQCREV FDEYGRELVK LCGRLMKVLS INLGLDEKTL QNAFGGEDIG ACLRVNFYPK CPRPELTLGL SSHSDPGGMT
MLLPDDQVPG LQVRKFNNWI TVKPARHAFI VNIGDQIQVL SNAIYKSVEH RVIVNSDKER VSLAFFYNPK SDIRIEPIKE
LVTVNTPSLY PPMTFDEYRL FIRMRGPRGK SQVESLKSPK *