GBrowse Details

Vigan.04G329400.01

Basic Information:
Name: Vigan.04G329400.01
Multiple alignment
Variant Information
Position: Chr04:45140397..45145949 (- strand)
Length: 5553
Functional Information:
Description: Similar to Uncharacterized protein. [K7MZ16, Glycine max]
InterPro: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG (IPR005269)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.91,6.19,4.63,9.92,0.13,2.23,3.96,8.26
Arabidopsis thaliana homolog: AT3G53450.1
Automatic updates:
Name: NM_001254266 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3-like (LOC100787375), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:45140397..45140668 (- strand)
Length: 272
Type: three_prime_UTR
Position: Chr04:45140669..45140764 (- strand)
Length: 96
Type: CDS
Position: Chr04:45141183..45141326 (- strand)
Length: 144
Type: CDS
Position: Chr04:45141432..45141502 (- strand)
Length: 71
Type: CDS
Position: Chr04:45144155..45144254 (- strand)
Length: 100
Type: CDS
Position: Chr04:45144633..45144663 (- strand)
Length: 31
Type: CDS
Position: Chr04:45144852..45144949 (- strand)
Length: 98
Type: CDS
Position: Chr04:45145530..45145649 (- strand)
Length: 120
Type: CDS
Position: Chr04:45145650..45145949 (- strand)
Length: 300
Type: five_prime_UTR

>Vigan.04G329400.01 class=Sequence position=Chr04:45140397..45145949 (- strand)
GGAGGGTAGA AGTGCGCGCG TGCCAAGTGC TATGGCTGGT CACGTGCGAA GACCAACATG GTTTTATTAT ATAAAGGCAT
GAGAGTTCTA AGAGTAGTAG CGAAGCAATC ACAGAGTCTT CTCCTAAATT CTCTTTTCTT CTCAAGGAGT GTAATTTTGT
TATTGTTGAA ACAGGGGAAG ATAGTGTTTG GAACAGAATT TGGATTTTGT GACACTCTTT TTGTTTCACA AACATTACAA
AATTTTTGTG TGACTGTGAA ATATAAACAT ATAGCTAACT ATCTTCCTTA CAACTAACAA ATGGAGACAC GTTGTGAGAT
AACGCATTCA AAGTTCAACA GGATTTGTGT GTTCTGTGGA AGTAGCCCCG GCAAGAAGAG TAGCTATCAA GATGCTGCCA
TTGAGCTCGG CAATGAACTG GTATGCTTTT TCTTCATGTC TTCCTTTTAT CTGCATTATG CTTTTGTTTT GTTTTCCTCA
ACATCTTCAA AACCTTTTCT TTCCTCTATT TTTCGTATGG GGTGTTGAAT ATTTTTCCTC GGAGTGAACT TCATCATGTG
CAAGCTCACT TCTTTATTAC ATTTTCATTT GGGTATGGTT ATTGATTCCC TTGAAACCAT AACGGGTGAG TTGGTTATGT
TCGCAATGCA AAGAGGATGT CTCTTGAGCA TTCTGAAACT GTTAAACTCT GAGTAGTTTT TGTTTAGAGC TTGAAGACTC
CATTGTTTTT TTTTTCTTGC CTCTTGAGCT TTTGGTTCAG GGGCTCTGAA CTGAACACTG TACGGAGTTA ACAAGTGCCT
TCTGCTGAGT GATTGAGCGT TGAGGAATAA TTTCCCCTTT TACTCTTGCA TTTTGAAACA GTGAAGAATG TACTCTCAGG
GGATTGTTTT CTATAGTCTC ATTCATTACT CTTTCTTTTA GATCATACGC AATCATAACC ACCACTATTA TTGTTTACTA
TTCCTAGGGT GACTAATATT ATTTTGAATG ATGTTGGAAG GTCTCAAGGA ACATCGATCT GGTGTATGGA GGGGGAAGCA
TTGGTCTAAT GGGTTTAGTT TCTCAAGCTG TTCATGATGG CGGTCGCCAT GTCATTGGGT AAACACTGTT TTCCTCACCG
TTTTACCTTT TTTTGTTTCT TTTTAATTCC CCTTTCTCTT TTTTCCCACA AAGTTGTTGG GTAAAAGGCA AGAACAAGGA
TTCGTAGTCA ATGAGTAACC ACTGTATTTT TTTGTTAGTC TCTTTCACTA TTGATGATAT ATTTGTCTTG TAATTGTCTC
TTGCAGAGTT ATTCCCAAGA CGCTCATGCC TCGAGAGGTA TGTATATCTG ATTCAACCAG TAGAAAAAGC TCAGCCCCTT
TTCTCTTCAC GCTTTTAAAC TTTAAACTAT TCTTACTTGT GTTTATTTGT TTATTTAATT TGTTTCTCAA CTTCATCAAG
GATTATACTG AAGCATTCTA TTCCATCCTT CACGAGCATG TTGTAAATTT TGTAAATGAA AACTCAGCTA TTTTGCATTT
TGTTTTTAAT AACTTGTTTC TGTCGACCAA TGCTTGTGTT GGTGTCTTGT ACTGTAGTAC TCCACTGGAA TAAGTTTTCA
AAGTAGGTTA AATGTATCAG ATTTCCATCC CTGCAACTTT CATCATTACT AAATGCTCTT TCTTTGGATT CCTTTGTTTT
GATGCTCCTT TGCAGCTAAC TGGTGAAACG GTGGGAGAAG TAAAAGCTGT TGCTGATATG CACCAAAGAA AGGCAGAGAT
GGCCAAACAT TCAGATGCCT TTATTGCCTT ACCAGGTTAG ACTGCGAATA TACTTGTTTG CACATTAGAA TCAGAGATAC
ACTAACAAAA AAAGGAAAAG GTTGTAACCA CGATGTGCTT CATTCACTTT AGTTATGTCA TGTCTTGTTA ATATTTTATA
AAACAAGTAT TAGACAAAAG ATAAACGTGT TTGATATCTC AAATATTGTG TGTTTGTGTG TGTGTGTATA TATATATATA
TATATATATA TTATATTATA ATATATATTT GAGATATACA AACTTTTTAT AAAGTGACTA AGAGGATTGA TAAAAATAGG
AAGGAAGAGA ATTTTAAATG ATTTTTGTGG TAGTATTTAG TGATGGGCAT ATCTATTCAT GATTGTTTCG AGGCTAGTTC
ACCGACATGT TTCCCGTTGA TTTCTCGGTG TTACTACTAC TTGTGTTGCT TTTCAGCAAA ATGGTTTTGT CTACAAAAGT
TTACAAGCTT TTTAAACTGA CACTGGCTTT GGTGTGTTTT TTTTGTTTTG CTAAACCTTT TTGGCTAAAC AATTTTAAAG
TGCTTACCAC GCCTAATTAT GGATAGTACT TGACAAGGCG TTAAAAACTT GTGTGATGAT TTGGAAGGCA CGACACGTAA
TGGATAATGT TCACCAGTGT CCACTTATTT AGTAAACATT GTGTCATGGG GATAAGACAG GAATTTAGTA ATTTTCAAAA
AGTGTTTCTA ACCAAACCTT CTTTTGGGCC TCTTTTATTC AATTCAATTG ACACTGCTGC AAAACCAACT TTCATGGCAC
ATCCCAATGC TATGATTAGA GAGAGCAACC CTTCAAAGCA GGCTGAAAAT GATGTTGACC TTTCATGAAC CCTTAATATA
TATCTTGGGA TATAAATTAA GCTTCTGCAG CTCTGAGCCA CTGTGGCTAG GTTCAGGTTG AATATACATA CACATTTTCC
CCCTCAACTT TGGTTTGGAC CGTGACGTGA TTCTACAAAA CTTCCCTTAT TTGATAAAGA GGGAAAGTAA AGCAAGAGAA
CTTTCACGAG ATAGCGTTTC CAACTAGCAC CTGCACCTGA CACGGAATAA TGCTTGACCC TTTTCTAAGA CTTTTTTAAC
TGCCCGTTGT TAGCATCCTC AGTGTATAAT TGAATGCTGA AAATTAGTGA CAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
GAGAGAGAGA GAGAGAGAAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
AGAGAGAGAG AGGAGAGAGA GAGAGAGAGA GGAGAGAGAG AGAGAGAGAG AGAGAGAAGA GAGAGAGAGA GAGAGAGAGA
GAGAGAGAGA GAGAGAAGAG AGAGAGAGGA GAGAGAGAGA GAGGGGAGAG AGGATAGAGG AGAGAGAGAG AGAGAAGAGA
GAGAGAGGAG AGAGAGAGAG AGAGAGAGGA GAAGAGAGAG AGAGAGAGAG AGAGGAGAGA GAGAGAGAGA GAGAGAGAGA
GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGG AGAGAGAGAG AGAGAGAGAG AGAGAGGAGA GAGAAGAGAG
AGAGAGAGAG AGAGAGAAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGG AGGAGAGAGA
GAGAGAGAGA GAGAGAGAGG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGGAGA GAGGAGAGAG AGAGAGAGAG
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGG AGAGAGAGAG AGGAGAGAGA
GAGAGAGGAG AGAGAGAGGA GAGAGAGAGA GAGAGAAAGA GAGAGAGAGA GAGAGAGAGA GAGGAGGAGA GAGGAGAGAG
AGAGAGAGAG AGGAGAGAGA GAGAGAGGAG AGAGAGAGAG AGAGAGGAGA GAGAGAGAGA GAGAGAGAGA GAGAGCGAGA
GAGGAGAGAG AGAGAAAAAA GAGAGAGAGA GAGAGAGAGA GAGAGACGAG AGAGAGAGAG AAGAGAGAGA GAGAGCGAGA
GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
GAAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAAGAGAGA GAGAGAGAGA GAGAGAGAGA AGAGAGAGAG AGAGAGAGAG
AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGCGCT CGAAGACAAT GTTGTCATTC ACTCTATCTT AGATGTCCCT
CGTACGAAAG AGGATTCCCC AGGAGGGTCA ATTCATGATC TCTGATGAAC TCTCCCTTGA CACTGCCAAA TCCATGATTC
TGTTTCAACA ACAAGTTGGT AGTACTAAAT GCTAGGGTCA TAGATACCAC AATCATACCT AAAAAACAAA CAAATAGTTG
AAATACAGTT TTCAAACTAT ATAATTAAAT TTCTATTTAC CTTTTTTATT AAACCCTTTC AATTTGACTT TTTCATTCAA
TGTTTGTGCT TTCAATTCTT GAAGAAACTC ATGAAAATCA CATGCAGGTG GATATGGGAC TCTAGAGGAG CTTCTTGAAG
TCATAACCTG GGCACAACTT GGGATTCATG ACAAGCCGGT AATTGACTTG ATCATTATGG GAATCATGTT ACTGAATGTT
TTATGTTCCT TTAGTTGTCT GGTGTTTGCA GCCTAGTTAG GTTTGACGTT CCAAAAATTG TAGGTGGGAT TAGTAAATGT
TGATGGATAC TTCAATTCCT TGCTGTCATT TATTGACAAA GCCGTGGAAG AGGGATTTAT CAGTCCAAAT GCTCGTCACA
TAATTGTATC AGCACCAACA GCAAAGGAGT TGGTGAAGAA ATTGGAGGTA ATATTTCCTT ACTAAAATTA TATTTCCATA
TTTTTTAAAA CAGATTTTGA CGTTTACCCT TTTGAATCAA CCTTATACTC ATTTTGAAAA GTCTAGTGAA GCTTTGTGGG
CATTACACAA CTCCTTTTCA ATTTGATTCT CACAATTTGA AGCAACTGTC TCACATAAAA CCACTTTCTC TGATTTCATT
GGAAAAGTCA CATCAAAACA AAGGTTTCCC TGGTTTCATA CTGTATATGA AAACAGGTAA ATAAAAGATT TGTAGACGCA
CAAAACAAAA CTTTTCTTGG ATGTCCGAGG ACATGCACAT TTATGTCATC AAGCTTATTC TATCAACTGT ATACGTAATC
AACTTTTGTT GTGCAAAAAA CTATGCAGTT GAGTAATATG AAATATTTTT GTGTTTAATT CACAGGATTA CGTTCCCTGC
CATGAGGGTG TTGCTTCCAA GTTGAGCTGG CAGATAGAAC AGCAGCTTGC ATACCCTCAA GATTATGACA TGTCAAGGTA
GTTAGGTTAC TTCACGTGCA CGGAAGATGA GACCATATAG AATTTTGAAG CTGGAAGAAG TTATATTTTC TATCGTTGTT
CTGTTTTTAT CCTTTTAATT TCTTGTGTAA ATTACCAGGA TTGACCTTGA TATGTGATAC TACTCTATTA GTTATTGCCA
TTACTTGTGA AACTTCGATT TTCTTGAAGT TGTAAGTACC TGCTTCTGAA GTTATTATTA TTATTATTTC TCAATGTCAA
TTAATTTTTA CGTTTGACTA GCCAAGACAA TGA

>Vigan.04G329400.01
GGAGGGTAGA AGTGCGCGCG TGCCAAGTGC TATGGCTGGT CACGTGCGAA GACCAACATG GTTTTATTAT ATAAAGGCAT
GAGAGTTCTA AGAGTAGTAG CGAAGCAATC ACAGAGTCTT CTCCTAAATT CTCTTTTCTT CTCAAGGAGT GTAATTTTGT
TATTGTTGAA ACAGGGGAAG ATAGTGTTTG GAACAGAATT TGGATTTTGT GACACTCTTT TTGTTTCACA AACATTACAA
AATTTTTGTG TGACTGTGAA ATATAAACAT ATAGCTAACT ATCTTCCTTA CAACTAACAA ATGGAGACAC GTTGTGAGAT
AACGCATTCA AAGTTCAACA GGATTTGTGT GTTCTGTGGA AGTAGCCCCG GCAAGAAGAG TAGCTATCAA GATGCTGCCA
TTGAGCTCGG CAATGAACTG GTCTCAAGGA ACATCGATCT GGTGTATGGA GGGGGAAGCA TTGGTCTAAT GGGTTTAGTT
TCTCAAGCTG TTCATGATGG CGGTCGCCAT GTCATTGGAG TTATTCCCAA GACGCTCATG CCTCGAGAGC TAACTGGTGA
AACGGTGGGA GAAGTAAAAG CTGTTGCTGA TATGCACCAA AGAAAGGCAG AGATGGCCAA ACATTCAGAT GCCTTTATTG
CCTTACCAGG TGGATATGGG ACTCTAGAGG AGCTTCTTGA AGTCATAACC TGGGCACAAC TTGGGATTCA TGACAAGCCG
GTGGGATTAG TAAATGTTGA TGGATACTTC AATTCCTTGC TGTCATTTAT TGACAAAGCC GTGGAAGAGG GATTTATCAG
TCCAAATGCT CGTCACATAA TTGTATCAGC ACCAACAGCA AAGGAGTTGG TGAAGAAATT GGAGGATTAC GTTCCCTGCC
ATGAGGGTGT TGCTTCCAAG TTGAGCTGGC AGATAGAACA GCAGCTTGCA TACCCTCAAG ATTATGACAT GTCAAGGTAG
TTAGGTTACT TCACGTGCAC GGAAGATGAG ACCATATAGA ATTTTGAAGC TGGAAGAAGT TATATTTTCT ATCGTTGTTC
TGTTTTTATC CTTTTAATTT CTTGTGTAAA TTACCAGGAT TGACCTTGAT ATGTGATACT ACTCTATTAG TTATTGCCAT
TACTTGTGAA ACTTCGATTT TCTTGAAGTT GTAAGTACCT GCTTCTGAAG TTATTATTAT TATTATTTCT CAATGTCAAT
TAATTTTTAC GTTTGACTAG CCAAGACAAT GA

>Vigan.04G329400.01
ATGGAGACAC GTTGTGAGAT AACGCATTCA AAGTTCAACA GGATTTGTGT GTTCTGTGGA AGTAGCCCCG GCAAGAAGAG
TAGCTATCAA GATGCTGCCA TTGAGCTCGG CAATGAACTG GTCTCAAGGA ACATCGATCT GGTGTATGGA GGGGGAAGCA
TTGGTCTAAT GGGTTTAGTT TCTCAAGCTG TTCATGATGG CGGTCGCCAT GTCATTGGAG TTATTCCCAA GACGCTCATG
CCTCGAGAGC TAACTGGTGA AACGGTGGGA GAAGTAAAAG CTGTTGCTGA TATGCACCAA AGAAAGGCAG AGATGGCCAA
ACATTCAGAT GCCTTTATTG CCTTACCAGG TGGATATGGG ACTCTAGAGG AGCTTCTTGA AGTCATAACC TGGGCACAAC
TTGGGATTCA TGACAAGCCG GTGGGATTAG TAAATGTTGA TGGATACTTC AATTCCTTGC TGTCATTTAT TGACAAAGCC
GTGGAAGAGG GATTTATCAG TCCAAATGCT CGTCACATAA TTGTATCAGC ACCAACAGCA AAGGAGTTGG TGAAGAAATT
GGAGGATTAC GTTCCCTGCC ATGAGGGTGT TGCTTCCAAG TTGAGCTGGC AGATAGAACA GCAGCTTGCA TACCCTCAAG
ATTATGACAT GTCAAGGTAG 

>Vigan.04G329400.01
METRCEITHS KFNRICVFCG SSPGKKSSYQ DAAIELGNEL VSRNIDLVYG GGSIGLMGLV SQAVHDGGRH VIGVIPKTLM
PRELTGETVG EVKAVADMHQ RKAEMAKHSD AFIALPGGYG TLEELLEVIT WAQLGIHDKP VGLVNVDGYF NSLLSFIDKA
VEEGFISPNA RHIIVSAPTA KELVKKLEDY VPCHEGVASK LSWQIEQQLA YPQDYDMSR*