GBrowse Details

Vigan.04G318600.01

Basic Information:
Name: Vigan.04G318600.01
Multiple alignment
Variant Information
Position: Chr04:44205073..44208158 (- strand)
Length: 3086
Functional Information:
Description: Similar to 70 kDa heat shock cognate protein 3. [Q5QHT2, Vigna radiata]
InterPro: Heat shock protein 70 family (IPR013126)
Heat shock protein 70, conserved site (IPR018181)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:53.74,141.18,327.41,111.19,406.62,183.01,129.41,75.68
Arabidopsis thaliana homolog: AT1G09080.1, AT1G16030.1, AT1G56410.1, AT3G09440.1, AT3G12580.1, AT5G02490.1, AT5G02500.1, AT5G09590.1, AT5G28540.1, AT5G42020.1
Automatic updates:
Name: NM_001317325 NCBI(nuccore)
Organism: Vigna radiata
Description: Vigna radiata heat shock cognate 70 kDa protein 2 (LOC106757615), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:44205073..44205360 (- strand)
Length: 288
Type: three_prime_UTR
Position: Chr04:44205361..44207102 (- strand)
Length: 1742
Type: CDS
Position: Chr04:44207711..44207924 (- strand)
Length: 214
Type: CDS
Position: Chr04:44207925..44208158 (- strand)
Length: 234
Type: five_prime_UTR

>Vigan.04G318600.01 class=Sequence position=Chr04:44205073..44208158 (- strand)
CCCACTGTTT AGAAAAAATC AGATCTGAAA ACGTGAAAAT TATGTGTAGC CAACTGGCAA CGACTTCTGG GACTGAAAGA
AGATTCTGGA AGGACTTCAA ACCCTAATTA TATAAGCTAA TTATCACCTT CTCCTTAGGT CTCCCTTCAA TCACAGTGGT
GTTGTCGCTG TGGTTTTTCA TTTTCTTCCT TCCTTTTAGA TCTCTTGTTT GTCTCAGACA CACGCTGAAA AACAATGGCT
GGGAAAGGTG AGGGTCCTGC TATCGGAATC GATCTCGGAA CCACGTACTC TTGTGTCGGG GTCTGGCAAC ATGACCGCGT
TGAAATCATT GCCAACGACC AAGGTAACAG AACGACGCCG TCTTACGTTG GATTCACCGA CACCGAGCGT CTCATTGGTG
ACGCCGCCAA GAACCAAGTC GCCATGAACC CCATCAACAC CGTCTTCGGT AACATCTCTT AAGCACACAT TTTTTGTTCT
ACATTTTTAC TCTGCAAATG AATAGACTTG TGCTTCTCTT TTATTTATTT GTTTATTTAT TATATCTGAT AATGATGTGC
ACAAAAAGAA CTCCTGTTTT TTAGATCTAC GGCGCTGTAG AAATTCGGTT ACTTTATTAA CTTTTTTTTT TCTATTTGTT
TCTAATTTTA GTTTCCATAT GAGAAATATC CGAGGTTTGT TGTCTGTACA TGTGTCGTAA AATTTTTGTC TTTTGTCACT
CTTACCTAAG AAGAACACTT AGTTGAATAA AATTGATCTG TATCGGATTA GTTTTCTTGT GTAGAAAGTA ATACTTAAAA
TGTGAACAAC TAGAGGAACT GAAATTTGAA TAAATAACAA GTACGGAGAT TTAAATATAA AAGGAGGCCA TCTATATGAA
CTAAAAATTA GAAAGGAGAT AATTATACAG ATTAAATGAT AGTTTAACTT GGAAATTTTG ATGAATTATT TTAGATACGT
TTAAGTTTCT GGCTTCAGTT TGCCTGAACT ATGTGGTTTT TTGCATTTAG TGATGTACTT GATGTCTAAT TTTTAAGCTC
TTGTTTTGAA TCACAGATGC AAAGAGGTTG ATTGGTCGTA GATTCACCGA TGCCCCTGTT CAGAGTGATA TCAAATTGTG
GCCTTTTAAG GTTATTGCTG GTCCTGCCGA TAAGCCAACT ATTGTAGTTA ACTACAAGGG TGAGGAGAAA CAATTTGCTG
CTGAGGAAAT CTCTTCGATG GTGCTCATGA AGATGCGTGA AATTGCTGAG GCTTACCTGG GCTCTACAGT GAAGAATGCT
GTTGTTACCG TCCCTGCTTA CTTCAATGAT TCTCAGCGTC AAGCTACCAA GGATGCTGGC GTTATTGCTG GTCTCAATGT
CATGCGTATT ATCAATGAGC CTACTGCAGC TGCCATTGCA TATGGTCTTG ATAAGAAAGC ATCAAGTGTG GGTGAGAAGA
ACGTGTTGAT CTTTGATCTT GGTGGTGGGA CATTCGATGT TTCTTTACTT ACTATCGAGG AGGGCATCTT TGAGGTGAAA
GCCACAGCTG GTGACACCCA TCTTGGAGGA GAGGATTTTG ATAACAGGAT GGTGAACCAC TTTGTGCAAG AGTTTAAGAG
GAAGAACAAG AAGGACATAA GTGGAAACCC CAGAGCACTT AGAAGGTTGA GGACTGCTTG TGAGAGGGCG AAGAGAACCT
TGTCATCTAC TGCTCAGACT ACTATTGAAA TTGATTCTCT ATACGAGGGA ATTGATTTCT ACTCCACCAT TACTCGTGCC
AGATTTGAGG AGCTCAATAT GGACCTCTTC AGAAAATGTA TGGAACCAGT GGAGAAGTGT TTGAGGGATG CTAAGATGGA
CAAAAGAAGC GTGGACGATG TTGTCCTTGT TGGTGGTTCT ACCAGAATTC CCAAGGTTCA GCAACTACTC CAGGATTTCT
TTAATGGAAA GGAGCTGTGC AAGAGCATCA ACCCTGATGA GGCTGTTGCT TATGGTGCGG CTGTCCAGGC TGCGATCTTA
AGTGGTGAAG GCAATGAGAA GGTTCAAGAT CTTCTCCTTC TTGATGTTAC TCCTCTATCT CTTGGTTTGG AGACCGCCGG
TGGTGTGATG ACTGTCCTGA TCCCTAGGAA CACTACAATT CCAACAAAGA AAGAACAGGT TTTCTCAACA TACTCTGATA
ACCAGCCTGG TGTGTTGATC CAGGTCTTTG AAGGTGAAAG AGCAAGGACC AGAGATAACA ATTTGTTGGG CAAATTTGAA
CTTTCTGGCA TTCCTCCTGC TCCCAGGGGT GTTCCACAAA TTACAGTGTG CTTTGACATT GATGCCAATG GTATCTTGAA
CGTCTCTGCT GAAGATAAAA CCACTGGCCA GAAAAACAAG ATCACTATCA CCAATGACAA GGGTAGGTTG TCGAAGGAGG
ATATTGAGAA GATGGTTCAA GAGGCTGAGA AGTACAAATC CGAGGATGAA GATCACAAGA AGAAGGTCGA GGCCAAGAAC
GCCTTGGAAA ACTACGCTTA CAATATGAGG AACACTGTGA AGGATGACAA GATTGGTGGC AAACTGGATC CTGCTGACAA
GAAAAAGATT GAGGATGCAA TTGAGCAAGC TATCCAATGG TTGGACAGCA ACCAGCTTGC AGAGGCAGAT GAGTTTGAGG
ATAAAATGAA GGAATTGGAA AGCGTCTGCA ATCCTATCAT TGCCAAAATG TACCAGGGTG GTGCCGGTCC AGACATGGGC
GGTGCTCCTC CAGCAGAGGA TGAATATACT CCTTCAGGTG GAAGTGGCGC TGGCCCCAAG ATTGAGGAAG TCGACTAAAT
CATATTTGCT TTCCATCACT TAAATTATTT TTTTTGAAAG AACTTATTTT GATGTTTTTT TGTTGGATTT AACTGCATTA
TTCTTCTTGC ATTGGATACT AATTATTTTC CCCGTCTGGA CATGTACCTT GCTCGACATT ATGTTATGTT TATGTTTTTA
GATGGTTAGA TTGAGGATAC TCAATTATCT AGATACATAG ATTATTCTAG ATTATTTTGT TATGTTAACA TTTGTGTTAT
GTGATGTTTT CAGAACTTTA TTTTTATTTA GTCATGTTTT TCACTA

>Vigan.04G318600.01
CCCACTGTTT AGAAAAAATC AGATCTGAAA ACGTGAAAAT TATGTGTAGC CAACTGGCAA CGACTTCTGG GACTGAAAGA
AGATTCTGGA AGGACTTCAA ACCCTAATTA TATAAGCTAA TTATCACCTT CTCCTTAGGT CTCCCTTCAA TCACAGTGGT
GTTGTCGCTG TGGTTTTTCA TTTTCTTCCT TCCTTTTAGA TCTCTTGTTT GTCTCAGACA CACGCTGAAA AACAATGGCT
GGGAAAGGTG AGGGTCCTGC TATCGGAATC GATCTCGGAA CCACGTACTC TTGTGTCGGG GTCTGGCAAC ATGACCGCGT
TGAAATCATT GCCAACGACC AAGGTAACAG AACGACGCCG TCTTACGTTG GATTCACCGA CACCGAGCGT CTCATTGGTG
ACGCCGCCAA GAACCAAGTC GCCATGAACC CCATCAACAC CGTCTTCGAT GCAAAGAGGT TGATTGGTCG TAGATTCACC
GATGCCCCTG TTCAGAGTGA TATCAAATTG TGGCCTTTTA AGGTTATTGC TGGTCCTGCC GATAAGCCAA CTATTGTAGT
TAACTACAAG GGTGAGGAGA AACAATTTGC TGCTGAGGAA ATCTCTTCGA TGGTGCTCAT GAAGATGCGT GAAATTGCTG
AGGCTTACCT GGGCTCTACA GTGAAGAATG CTGTTGTTAC CGTCCCTGCT TACTTCAATG ATTCTCAGCG TCAAGCTACC
AAGGATGCTG GCGTTATTGC TGGTCTCAAT GTCATGCGTA TTATCAATGA GCCTACTGCA GCTGCCATTG CATATGGTCT
TGATAAGAAA GCATCAAGTG TGGGTGAGAA GAACGTGTTG ATCTTTGATC TTGGTGGTGG GACATTCGAT GTTTCTTTAC
TTACTATCGA GGAGGGCATC TTTGAGGTGA AAGCCACAGC TGGTGACACC CATCTTGGAG GAGAGGATTT TGATAACAGG
ATGGTGAACC ACTTTGTGCA AGAGTTTAAG AGGAAGAACA AGAAGGACAT AAGTGGAAAC CCCAGAGCAC TTAGAAGGTT
GAGGACTGCT TGTGAGAGGG CGAAGAGAAC CTTGTCATCT ACTGCTCAGA CTACTATTGA AATTGATTCT CTATACGAGG
GAATTGATTT CTACTCCACC ATTACTCGTG CCAGATTTGA GGAGCTCAAT ATGGACCTCT TCAGAAAATG TATGGAACCA
GTGGAGAAGT GTTTGAGGGA TGCTAAGATG GACAAAAGAA GCGTGGACGA TGTTGTCCTT GTTGGTGGTT CTACCAGAAT
TCCCAAGGTT CAGCAACTAC TCCAGGATTT CTTTAATGGA AAGGAGCTGT GCAAGAGCAT CAACCCTGAT GAGGCTGTTG
CTTATGGTGC GGCTGTCCAG GCTGCGATCT TAAGTGGTGA AGGCAATGAG AAGGTTCAAG ATCTTCTCCT TCTTGATGTT
ACTCCTCTAT CTCTTGGTTT GGAGACCGCC GGTGGTGTGA TGACTGTCCT GATCCCTAGG AACACTACAA TTCCAACAAA
GAAAGAACAG GTTTTCTCAA CATACTCTGA TAACCAGCCT GGTGTGTTGA TCCAGGTCTT TGAAGGTGAA AGAGCAAGGA
CCAGAGATAA CAATTTGTTG GGCAAATTTG AACTTTCTGG CATTCCTCCT GCTCCCAGGG GTGTTCCACA AATTACAGTG
TGCTTTGACA TTGATGCCAA TGGTATCTTG AACGTCTCTG CTGAAGATAA AACCACTGGC CAGAAAAACA AGATCACTAT
CACCAATGAC AAGGGTAGGT TGTCGAAGGA GGATATTGAG AAGATGGTTC AAGAGGCTGA GAAGTACAAA TCCGAGGATG
AAGATCACAA GAAGAAGGTC GAGGCCAAGA ACGCCTTGGA AAACTACGCT TACAATATGA GGAACACTGT GAAGGATGAC
AAGATTGGTG GCAAACTGGA TCCTGCTGAC AAGAAAAAGA TTGAGGATGC AATTGAGCAA GCTATCCAAT GGTTGGACAG
CAACCAGCTT GCAGAGGCAG ATGAGTTTGA GGATAAAATG AAGGAATTGG AAAGCGTCTG CAATCCTATC ATTGCCAAAA
TGTACCAGGG TGGTGCCGGT CCAGACATGG GCGGTGCTCC TCCAGCAGAG GATGAATATA CTCCTTCAGG TGGAAGTGGC
GCTGGCCCCA AGATTGAGGA AGTCGACTAA ATCATATTTG CTTTCCATCA CTTAAATTAT TTTTTTTGAA AGAACTTATT
TTGATGTTTT TTTGTTGGAT TTAACTGCAT TATTCTTCTT GCATTGGATA CTAATTATTT TCCCCGTCTG GACATGTACC
TTGCTCGACA TTATGTTATG TTTATGTTTT TAGATGGTTA GATTGAGGAT ACTCAATTAT CTAGATACAT AGATTATTCT
AGATTATTTT GTTATGTTAA CATTTGTGTT ATGTGATGTT TTCAGAACTT TATTTTTATT TAGTCATGTT TTTCACTA

>Vigan.04G318600.01
ATGGCTGGGA AAGGTGAGGG TCCTGCTATC GGAATCGATC TCGGAACCAC GTACTCTTGT GTCGGGGTCT GGCAACATGA
CCGCGTTGAA ATCATTGCCA ACGACCAAGG TAACAGAACG ACGCCGTCTT ACGTTGGATT CACCGACACC GAGCGTCTCA
TTGGTGACGC CGCCAAGAAC CAAGTCGCCA TGAACCCCAT CAACACCGTC TTCGATGCAA AGAGGTTGAT TGGTCGTAGA
TTCACCGATG CCCCTGTTCA GAGTGATATC AAATTGTGGC CTTTTAAGGT TATTGCTGGT CCTGCCGATA AGCCAACTAT
TGTAGTTAAC TACAAGGGTG AGGAGAAACA ATTTGCTGCT GAGGAAATCT CTTCGATGGT GCTCATGAAG ATGCGTGAAA
TTGCTGAGGC TTACCTGGGC TCTACAGTGA AGAATGCTGT TGTTACCGTC CCTGCTTACT TCAATGATTC TCAGCGTCAA
GCTACCAAGG ATGCTGGCGT TATTGCTGGT CTCAATGTCA TGCGTATTAT CAATGAGCCT ACTGCAGCTG CCATTGCATA
TGGTCTTGAT AAGAAAGCAT CAAGTGTGGG TGAGAAGAAC GTGTTGATCT TTGATCTTGG TGGTGGGACA TTCGATGTTT
CTTTACTTAC TATCGAGGAG GGCATCTTTG AGGTGAAAGC CACAGCTGGT GACACCCATC TTGGAGGAGA GGATTTTGAT
AACAGGATGG TGAACCACTT TGTGCAAGAG TTTAAGAGGA AGAACAAGAA GGACATAAGT GGAAACCCCA GAGCACTTAG
AAGGTTGAGG ACTGCTTGTG AGAGGGCGAA GAGAACCTTG TCATCTACTG CTCAGACTAC TATTGAAATT GATTCTCTAT
ACGAGGGAAT TGATTTCTAC TCCACCATTA CTCGTGCCAG ATTTGAGGAG CTCAATATGG ACCTCTTCAG AAAATGTATG
GAACCAGTGG AGAAGTGTTT GAGGGATGCT AAGATGGACA AAAGAAGCGT GGACGATGTT GTCCTTGTTG GTGGTTCTAC
CAGAATTCCC AAGGTTCAGC AACTACTCCA GGATTTCTTT AATGGAAAGG AGCTGTGCAA GAGCATCAAC CCTGATGAGG
CTGTTGCTTA TGGTGCGGCT GTCCAGGCTG CGATCTTAAG TGGTGAAGGC AATGAGAAGG TTCAAGATCT TCTCCTTCTT
GATGTTACTC CTCTATCTCT TGGTTTGGAG ACCGCCGGTG GTGTGATGAC TGTCCTGATC CCTAGGAACA CTACAATTCC
AACAAAGAAA GAACAGGTTT TCTCAACATA CTCTGATAAC CAGCCTGGTG TGTTGATCCA GGTCTTTGAA GGTGAAAGAG
CAAGGACCAG AGATAACAAT TTGTTGGGCA AATTTGAACT TTCTGGCATT CCTCCTGCTC CCAGGGGTGT TCCACAAATT
ACAGTGTGCT TTGACATTGA TGCCAATGGT ATCTTGAACG TCTCTGCTGA AGATAAAACC ACTGGCCAGA AAAACAAGAT
CACTATCACC AATGACAAGG GTAGGTTGTC GAAGGAGGAT ATTGAGAAGA TGGTTCAAGA GGCTGAGAAG TACAAATCCG
AGGATGAAGA TCACAAGAAG AAGGTCGAGG CCAAGAACGC CTTGGAAAAC TACGCTTACA ATATGAGGAA CACTGTGAAG
GATGACAAGA TTGGTGGCAA ACTGGATCCT GCTGACAAGA AAAAGATTGA GGATGCAATT GAGCAAGCTA TCCAATGGTT
GGACAGCAAC CAGCTTGCAG AGGCAGATGA GTTTGAGGAT AAAATGAAGG AATTGGAAAG CGTCTGCAAT CCTATCATTG
CCAAAATGTA CCAGGGTGGT GCCGGTCCAG ACATGGGCGG TGCTCCTCCA GCAGAGGATG AATATACTCC TTCAGGTGGA
AGTGGCGCTG GCCCCAAGAT TGAGGAAGTC GACTAA

>Vigan.04G318600.01
MAGKGEGPAI GIDLGTTYSC VGVWQHDRVE IIANDQGNRT TPSYVGFTDT ERLIGDAAKN QVAMNPINTV FDAKRLIGRR
FTDAPVQSDI KLWPFKVIAG PADKPTIVVN YKGEEKQFAA EEISSMVLMK MREIAEAYLG STVKNAVVTV PAYFNDSQRQ
ATKDAGVIAG LNVMRIINEP TAAAIAYGLD KKASSVGEKN VLIFDLGGGT FDVSLLTIEE GIFEVKATAG DTHLGGEDFD
NRMVNHFVQE FKRKNKKDIS GNPRALRRLR TACERAKRTL SSTAQTTIEI DSLYEGIDFY STITRARFEE LNMDLFRKCM
EPVEKCLRDA KMDKRSVDDV VLVGGSTRIP KVQQLLQDFF NGKELCKSIN PDEAVAYGAA VQAAILSGEG NEKVQDLLLL
DVTPLSLGLE TAGGVMTVLI PRNTTIPTKK EQVFSTYSDN QPGVLIQVFE GERARTRDNN LLGKFELSGI PPAPRGVPQI
TVCFDIDANG ILNVSAEDKT TGQKNKITIT NDKGRLSKED IEKMVQEAEK YKSEDEDHKK KVEAKNALEN YAYNMRNTVK
DDKIGGKLDP ADKKKIEDAI EQAIQWLDSN QLAEADEFED KMKELESVCN PIIAKMYQGG AGPDMGGAPP AEDEYTPSGG
SGAGPKIEEV D*