GBrowse Details

Vigan.04G304100.01

Basic Information:
Name: Vigan.04G304100.01
Multiple alignment
Variant Information
Position: Chr04:42667069..42668293 (+ strand)
Length: 1225
Functional Information:
Description: Similar to uncharacterized protein. [B8AZI2, Oryza sativa subsp. indica]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:102.08,71.85,12.76,78.59,8.81,21.95,5.96,13.74
Arabidopsis thaliana homolog: AT3G51510.1
Automatic updates:
Name: NM_001250344 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499876 (LOC100499876), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:42667069..42667149 (+ strand)
Length: 81
Type: five_prime_UTR
Position: Chr04:42667150..42667482 (+ strand)
Length: 333
Type: CDS
Position: Chr04:42667575..42667691 (+ strand)
Length: 117
Type: CDS
Position: Chr04:42667794..42667871 (+ strand)
Length: 78
Type: CDS
Position: Chr04:42667872..42668293 (+ strand)
Length: 422
Type: three_prime_UTR

>Vigan.04G304100.01 class=Sequence position=Chr04:42667069..42668293 (+ strand)
CAACCTACCT AAGGCCCAAA CTTAGGATAA GGTTCTACTG GCAGTACCTC AACTCCCAAT TTGTGAATTA GAAAAAATAT
CATGGCGGCC AGTTGCGGTG GCAGCTTCTT AACACTGTGG TGTGCCGGTG CTATCCAAAA TCAACATGTA TCACAACCTA
CAACATTTCT TGGAGCTCCC GACTACCACC ATAGGAAGAG GAAAACACTG CATAGGTTAG TTGTGGTAGC TGTGACCCAA
GGCTCCGCCG AATCAAGTAA ATCAGAGGAA AAAATCCCTT CCTGGGCTAA ACCAGATTCC GATGAACCAC CACCATGGGC
CAGGGATGAG GCCAACAAAA ACACTTCGGA GCAAGGATTT GAAATCCCAT TCTTCGCCTA TTTACTTGCC TCTGCCATCA
CAGCAATTGC TGCTGTAATT AACCAACTTC TTACCACTAT TATTATTATT ATTAATATTG TTTTCTTTTT ATTTGTTTCT
TGACAGTGTA TCTTTTGCTG CCACAGATTG GCTCCATCTT TGAATATGTG AACCAAAGAC CGGTGTTTGG AGTATTAACC
TCGGACAGCG TGTTTTATGC TCCCTTGCTT GGTTTTTTTG TCTTCACTGG CATTCCCTCT TCGGTAAGAA TTAATTACTC
TTCTCAATGT TCAGATTGAG AATTTTAATT AAAATTAATT AATTTAATGT TGCTTCTTGC CTATTTATGA ACTCTTAATG
GTCAGGCTTT CCTTTGGTTC AAATCTGTTC AAGCTGCTAA CAAGGAAGCA GAGGAACAAG ACAAGAAGGA TGGATATTTA
TAGAGGTGGA TTCTGATTTG CATTTCTTTA TTCTATAAGT TATGAAGAAA ATGCACGTAC TGCCGTGTTA AATGTGAATA
TTAACTTTTA TGTATGAATA CAGATATTAG TATGGTAGAA TATGGAGCAC CATTGTCATT GTGTAATCAA TACAAGTAAG
AATGGTTTGT GATGATGTTA AGTCAATCTT CTGGAAATGC TTGACTTTGA TGTCTGTCTG TGAATGGTGA AAAAAATATG
AGAAAATAAT CTCTCAATGT TAATGTCAAA CAAAACTTGA GAAGACCAAA ATCTAATAGA TGTAACTCTA ATTATTTATT
TTAGTAATAT ATGTTGTATC TTCTTTTCAT ATATTTAAGT AAGTTCTTCA TAATCTCATT TTTATATATT ATTTTGATTT
AATTAATTTA GTGATATGAT CCTAG

>Vigan.04G304100.01
CAACCTACCT AAGGCCCAAA CTTAGGATAA GGTTCTACTG GCAGTACCTC AACTCCCAAT TTGTGAATTA GAAAAAATAT
CATGGCGGCC AGTTGCGGTG GCAGCTTCTT AACACTGTGG TGTGCCGGTG CTATCCAAAA TCAACATGTA TCACAACCTA
CAACATTTCT TGGAGCTCCC GACTACCACC ATAGGAAGAG GAAAACACTG CATAGGTTAG TTGTGGTAGC TGTGACCCAA
GGCTCCGCCG AATCAAGTAA ATCAGAGGAA AAAATCCCTT CCTGGGCTAA ACCAGATTCC GATGAACCAC CACCATGGGC
CAGGGATGAG GCCAACAAAA ACACTTCGGA GCAAGGATTT GAAATCCCAT TCTTCGCCTA TTTACTTGCC TCTGCCATCA
CAGCAATTGC TGCTATTGGC TCCATCTTTG AATATGTGAA CCAAAGACCG GTGTTTGGAG TATTAACCTC GGACAGCGTG
TTTTATGCTC CCTTGCTTGG TTTTTTTGTC TTCACTGGCA TTCCCTCTTC GGCTTTCCTT TGGTTCAAAT CTGTTCAAGC
TGCTAACAAG GAAGCAGAGG AACAAGACAA GAAGGATGGA TATTTATAGA GGTGGATTCT GATTTGCATT TCTTTATTCT
ATAAGTTATG AAGAAAATGC ACGTACTGCC GTGTTAAATG TGAATATTAA CTTTTATGTA TGAATACAGA TATTAGTATG
GTAGAATATG GAGCACCATT GTCATTGTGT AATCAATACA AGTAAGAATG GTTTGTGATG ATGTTAAGTC AATCTTCTGG
AAATGCTTGA CTTTGATGTC TGTCTGTGAA TGGTGAAAAA AATATGAGAA AATAATCTCT CAATGTTAAT GTCAAACAAA
ACTTGAGAAG ACCAAAATCT AATAGATGTA ACTCTAATTA TTTATTTTAG TAATATATGT TGTATCTTCT TTTCATATAT
TTAAGTAAGT TCTTCATAAT CTCATTTTTA TATATTATTT TGATTTAATT AATTTAGTGA TATGATCCTA G

>Vigan.04G304100.01
ATGGCGGCCA GTTGCGGTGG CAGCTTCTTA ACACTGTGGT GTGCCGGTGC TATCCAAAAT CAACATGTAT CACAACCTAC
AACATTTCTT GGAGCTCCCG ACTACCACCA TAGGAAGAGG AAAACACTGC ATAGGTTAGT TGTGGTAGCT GTGACCCAAG
GCTCCGCCGA ATCAAGTAAA TCAGAGGAAA AAATCCCTTC CTGGGCTAAA CCAGATTCCG ATGAACCACC ACCATGGGCC
AGGGATGAGG CCAACAAAAA CACTTCGGAG CAAGGATTTG AAATCCCATT CTTCGCCTAT TTACTTGCCT CTGCCATCAC
AGCAATTGCT GCTATTGGCT CCATCTTTGA ATATGTGAAC CAAAGACCGG TGTTTGGAGT ATTAACCTCG GACAGCGTGT
TTTATGCTCC CTTGCTTGGT TTTTTTGTCT TCACTGGCAT TCCCTCTTCG GCTTTCCTTT GGTTCAAATC TGTTCAAGCT
GCTAACAAGG AAGCAGAGGA ACAAGACAAG AAGGATGGAT ATTTATAG

>Vigan.04G304100.01
MAASCGGSFL TLWCAGAIQN QHVSQPTTFL GAPDYHHRKR KTLHRLVVVA VTQGSAESSK SEEKIPSWAK PDSDEPPPWA
RDEANKNTSE QGFEIPFFAY LLASAITAIA AIGSIFEYVN QRPVFGVLTS DSVFYAPLLG FFVFTGIPSS AFLWFKSVQA
ANKEAEEQDK KDGYL*