GBrowse Details

Vigan.04G266400.01

Basic Information:
Name: Vigan.04G266400.01
Multiple alignment
Variant Information
Position: Chr04:38635617..38640539 (+ strand)
Length: 4923
Functional Information:
Description: Similar to peroxisomal nicotinamide adenine dinucleotide carrier-like. [XP_004513596.1, Cicer arietinum]
InterPro: Mitochondrial substrate/solute carrier (IPR018108)
Mitochondrial carrier domain (IPR023395)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.70,2.94,8.16,37.39,5.58,4.72,14.34,11.67
Automatic updates:
Name: NM_001255498 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxisomal nicotinamide adenine dinucleotide carrier-like (LOC100775304), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:38635617..38635775 (+ strand)
Length: 159
Type: five_prime_UTR
Position: Chr04:38635776..38635862 (+ strand)
Length: 87
Type: CDS
Position: Chr04:38635929..38636030 (+ strand)
Length: 102
Type: CDS
Position: Chr04:38636111..38636185 (+ strand)
Length: 75
Type: CDS
Position: Chr04:38636865..38636995 (+ strand)
Length: 131
Type: CDS
Position: Chr04:38637130..38637184 (+ strand)
Length: 55
Type: CDS
Position: Chr04:38637682..38637834 (+ strand)
Length: 153
Type: CDS
Position: Chr04:38638313..38638381 (+ strand)
Length: 69
Type: CDS
Position: Chr04:38638469..38638576 (+ strand)
Length: 108
Type: CDS
Position: Chr04:38638726..38638794 (+ strand)
Length: 69
Type: CDS
Position: Chr04:38639124..38639178 (+ strand)
Length: 55
Type: CDS
Position: Chr04:38639833..38640023 (+ strand)
Length: 191
Type: CDS
Position: Chr04:38640024..38640539 (+ strand)
Length: 516
Type: three_prime_UTR

>Vigan.04G266400.01 class=Sequence position=Chr04:38635617..38640539 (+ strand)
AAAGCGTTTA CTAACAGACT TTTCCGGGTG AAGTCAAAGT ATTGGCATGT CCAAATATTC CTGATATCTT CTCTTTCAAA
CAAGTATGTT AAGTGAAGCT AAAAGAATTA AGATTTAAGG CAGAAGAAAA GAAAGAATTG AACAAGAGTT GCAACAACCA
TGTCAGAATC AAACGCAATT GCAAATGGAT TGGCTGGTGC AGGTGGTGGA ATCATTGCTC AAATCATCAC TTATCCTCTT
CAAACGGTAC TCTCTCTTTC TCTATATGCT TCTCTCTTTG GCCTTGCGAC CAACTCCCTT GAAAATTTTC AGGTAAACAC
GCGTCAGCAA ACTGAGAGAA CACTCAAGAG GAACAAGCAA AGTTTGCCCT CTAACACAAC CACTGCTCCT GGCACTCTTC
TTCAGATCTT TCAGGTTCAA ATTTTGCTCT TTTTTCTCAT TTGATTGGTT TATTTTATGA TGGTATATTC ATTATATTTG
TGACCCTTTT TCAGGTCATT AGAACTGAGG GTTGGGGTGG ACTCTACAGT GGCCTCAAGC CTTCTCTTCT TGGAACTGCT
GCTTCTCAGG TTCTCAGTTT TCGACCATAC CCCACATGGC AAATCCTAGC AATACACCCT TGTGAAATCT CTACTTATTA
TTGATTCAAC ATTTTATGAA ATTACATAAG TGTGCTGGTT TCACTTCTTA TGTAATGAAC TTCAGTCATG AATTTGTTGT
TTTCAATAAA ATTTGACCAG TAAAGAAGAT TGTCTTAGAA ACAACTTTGA ATATGTTGCT AGCTAGCACT CTTCTACACT
ATAATTGCTT TTGTTCGTTA TTCATTATTC ACCTCTTATA AGATGCAAAA TTCAAGGCTT AAGGCATGAG GTATAATTTT
ATTGGTTTCA CTTATTTAAT GCATTTCACA CATGAGGTAC ATTTTTAACA CCTCTCTACA GATAATAGCT TATGCTTATT
ATATAGTATT CGCCTGTTAT AAGACGCAAA ATTCAAGCCT CAAGACACGG TGTGTGGTAA ATGAGATTGT GTCTAGCGAA
AGGGGCTAGT CTCCAATAAC CTCATGAATT AAGATTCAAA TATTTATTGA AAGTGGTGCT CAAACTTAAT GTTTGACTGT
GTCTTGGAAA ATATTACATC TGAAGGAGGA TACATGTGGT GTGGGAAACC ATTAAACCAA AAACAAAGTA ACATGACTAC
TCAGTGAGTT GTGGGGTAGT TATCTAATGC TTATTTTTCT GTTTTCAGGG CATTTACTAC TATTTCTATC AAGTTTTCAA
GAACAAGGCA GTGGCGATTG CAGCTGCACG GAAAGTGAAA GGGCGTGGAG ATGGTACTGT TGGGATGTTT GGTTGGCTTG
TTGTGGCTGC AATTGCTGGG TGACTATTCC ATCATACAAA TTTTATTTGA ATGTTGCATT TCAGGATAAA CATGTTTGTG
TTGTGTTGGT GATACTAAAC CCAACTTCTC TCTCTTTGCT TGATATTCTT GTTGGAATTG TCTTATTTTT CAGGTCCTTG
AATGTGTTGC TGACAAATCC AATATGGGTT TTAGTGACTC GGATGCAGGT GCTTTCAGAT GCTTTTATTT TCTTCCTGGA
CTGTTTTATA TGATTATAGG TTGTCAAACA AAATTCTGGT TGCTTTTCAT TAGATCTTTT TCTTTTCTAT TTCATAAATA
CGGTCACTTA CAGTGAGACA TTATGTATGT TAAGTTAATT TTAGTTTATA GATATCTTAA TTTCATTTTT TCTTCTTATT
TTTCTCTTCT AAAAATTTTA TGAACAAGTT TCTCTGAACA TATCCTTAAC CTTTAACTGA GTCAAATGGT GTCGTGTAAT
CTATGTATCT TGTGTCTAAA AGTTGTGTTA CGTCTAACAA AAAGTTCAAT AATTTTCACA TGAAAGTGCC GGGATGTGGC
TTAAAGCCAA AAAGAGTTAG AATCCACAGA CTTTGAATGC TTAAAGCTGG ATACTATTTG ATTGCCCTGT TGCTACACTC
AAACCATGCA TCCATGATTT TGGTCTAGTG TCAATGATGT GTGACATTTT ATATTTTGAT TCTAGACTCA TACTCAAGCA
GAAAGGAAAA TTATGGAGGA AAAGAAAGAA GCTTTAAGGA AGGCTGCTTC TGAAAGCGCC ATAGCAGATT CCACATTGCA
AGATAAATTG GATGAACTGA ATTCTATAAA ACCTCGACCA TTTGGAACTA TACATGCAGT AGGTCTCTTA TTTCATTTTC
CTTCTCTGAC TACTGTTTAT TCTTTACATT GGTCAGGGAT TGAGTGTGAT TTTTCTTCTT GTTCTTGTTC TTGTTCTTGT
TATTTTTACA TCTCTCTGGA TAACTGTTCA AACCATAAAT TTGAATTATA ACAACACCAA TCGAGTTTTA TTTTTCCAAA
TCTTTAGAAA TTTTAGTTTT TTTATATCAG GAAAAATTAT CTGTCGTTTG ACATTCTCCA TGCTCCACTT TGTCAGAAAC
AAAAAGTGGT TGGGTCTTCC TGCAATTACT ATCACGATCT TCTTGTTGAA GTGTTTATAT GTTATATTGT TAAAAACAAA
AGGCATGGAT TATTCAAAGG GTTGTCCTGG TTGGCAATAT AAAGAATACA ACTCTACCTA AGATTTGCAT ATTCCCAGCT
AAATTATCAC TTTCGCTTCT GTTCATTCTG ATATGAATCG TTGTTTTGGT TAAAAGGCTA AAGAAGTCTA CAATGAAGCG
GGTACAGTAG GATTTTGGAA GGGTGTCTTC CCTGCCCTTA TTATGGTCAG CCTCATCACT TGTTTTTAAT ATGCACCAAG
TTTATGTGTA ATATTTGTAT AATCTCCGTA TCTTTGAGAA TTTTCATTTC AGGTATGTAA TCCATCAATT CAGTTTATGA
TTTATGAAAG CTCATTAAAG CATCTAAGGG CAAAACGTGC CGCTAAGAAG CAAGGGAATA CAAGTATATC CGCTTTGGAG
GTAATGAAAT AAGTGGAAAA CATGTTGCAG AAGAACATTT TGAGTTGTTT CATGCGAGTT TATATATATA AATATATATA
TATATATATA TAGATATCTT TCCATGCTTC GAATATTAGT AAATAAGCAT CGTCCTATCC TTCAAAAAGG TCTTTTTGGT
GGGAGCAATA GCTAAGCTTG GAGCCACTGT GACAACATAT CCATTACTAG TTGTGAAGGT AAATCCACCA ATAGTTCCTT
CATTTTTTTC CTCACTTATT TATTATTAAT ATAAAACCTC ATGAAGTGAT CATTAGTATA GGGCGTGCTT ATGATCCACT
TCAAAGTATA TATCCTACAA ATCATCAATC ATTGGTCCAC TATTGTATTA AATAACATTC CAGGAAATGA AACCATAGTT
TTCTTTCTCT TCAAGTCTTG GTACAGCAAA GAGTTTGATT CTTTTGCAGT TTTCTGCAGA GTCTCATCAT GTCTTAAATA
CACTTGCATT ATAACACTCT TGTATGTGCG TGATGATTAA TACCACTACA TGTTTCTTTG TACACAGTCA AGGCTTCAAG
CAAAACAGGA GATTGGTGGA AATAACTCCT TAAGATACTC AGGTTTGCTT TTAGATAGAT GAGCTATAGC TTGATTAGCC
TTTGGATGTT GTGAATATAT TTTTCTTTTG TTTTAACCTC ATTCTTACCA ATATCTGGTT GAAGCGATCA ATGTTCATTG
ATTTTCTGCT ATTTGTTAAA TATTAAAGCT ATGGAATCAT TAACATTGTG ACTGAAACTT CGTTAGCTGC TGTTCAAAGT
GGTTTATATT CCCAGTACAC AAAAAGAGGA ATAAAAGGGA AGAAAAAGTG TGCTATTTGT TATTTTACTT AAGAGGAGTG
CTAACAACAC TTGAAATCCA CCTAATTAGT GATCTTTGAT CAATTTTAAG TTGTAGTCAA GAGTCATAGA GAGTATACAG
ATTCTTGGAA AATTCTTATA TTTTGAGTTT GACTTTAACT CAATCCTACA AAAATCAATT TATGAAATAC GGATTAATTT
TTTATAGACT TTGTTTTGTT CTTACTTCAA GTCTTAGGAC TTTGATTTCT TTGGATACAT GCCTGTGATA TAAACCGCTT
TTTCTTCATT TTAATTTAGA ACTTCTTTAT CTTTAAGCCT TTCACTTACT ATCATCAACA ATCATAACAA GAAAGAAAAC
AAAACTATTC CACTTTGTCA AAGTATGTCT TCCTATTTCT AAAGCTATAA ATGCAGGTAC TTTTGATGCT GTACTTAAAA
TGATCCGTTA TGAAGGAATA ACAGGCTTCT ATAAGGGGAT GAGCACAAAG ATAGTGCAGA GTGTTTTTGC AGCCTCTGTT
CTATTTATGA TCAAAGAGGA GCTTGTTAAG GCTTTTATAG TTCTAACCAA TAAGAGCAAA AAAGTTTCAT CAAATTTGAG
TAGTTGACAT TTTTACCATA TGAAAGCGAT AATAAGTATA TCACTCGGTT TACCTTTCCC TATTGTTTAT TCACTGATTG
TGGGGAGAGA GAGGTGAAGT CCTCACCAAA ATAATGGATG AAGTTAACTC CACTAGTGCA GATGAGCCAT CCTTATGTTA
TCCCTTTGGC ATGCAGTGCT GCAGAACTCC TTGGAATTTC TCATAGTTCA TTTCAAGAAC CAAGGAACTG AGAACATTCA
ACAATCATGA GAGTGACTTC TTCCAACAGC AGTGTTATGC AAGCATTCTT TTCCAAAGAA TTAAAAACCA AAGTGCTTTG
TGTATAATTC TTGAATAAAT TAACAGACAA TCATTATGCT GAGCCATTGA ATTGCATGTA TATTGGTATG GTAAGAAAAG
TTCATATGTC ATCATGGATA AATACACTAC AGTGACAGAT AATTTTTTTT TCCATCTGCA ATGAGTTGTT TATGTACCTT
ATGTTTGGTT GATTTGAATG TGCTTGATTG AAAACTGGAA AGA

>Vigan.04G266400.01
AAAGCGTTTA CTAACAGACT TTTCCGGGTG AAGTCAAAGT ATTGGCATGT CCAAATATTC CTGATATCTT CTCTTTCAAA
CAAGTATGTT AAGTGAAGCT AAAAGAATTA AGATTTAAGG CAGAAGAAAA GAAAGAATTG AACAAGAGTT GCAACAACCA
TGTCAGAATC AAACGCAATT GCAAATGGAT TGGCTGGTGC AGGTGGTGGA ATCATTGCTC AAATCATCAC TTATCCTCTT
CAAACGGTAA ACACGCGTCA GCAAACTGAG AGAACACTCA AGAGGAACAA GCAAAGTTTG CCCTCTAACA CAACCACTGC
TCCTGGCACT CTTCTTCAGA TCTTTCAGGT CATTAGAACT GAGGGTTGGG GTGGACTCTA CAGTGGCCTC AAGCCTTCTC
TTCTTGGAAC TGCTGCTTCT CAGGGCATTT ACTACTATTT CTATCAAGTT TTCAAGAACA AGGCAGTGGC GATTGCAGCT
GCACGGAAAG TGAAAGGGCG TGGAGATGGT ACTGTTGGGA TGTTTGGTTG GCTTGTTGTG GCTGCAATTG CTGGGTCCTT
GAATGTGTTG CTGACAAATC CAATATGGGT TTTAGTGACT CGGATGCAGA CTCATACTCA AGCAGAAAGG AAAATTATGG
AGGAAAAGAA AGAAGCTTTA AGGAAGGCTG CTTCTGAAAG CGCCATAGCA GATTCCACAT TGCAAGATAA ATTGGATGAA
CTGAATTCTA TAAAACCTCG ACCATTTGGA ACTATACATG CAGCTAAAGA AGTCTACAAT GAAGCGGGTA CAGTAGGATT
TTGGAAGGGT GTCTTCCCTG CCCTTATTAT GGTATGTAAT CCATCAATTC AGTTTATGAT TTATGAAAGC TCATTAAAGC
ATCTAAGGGC AAAACGTGCC GCTAAGAAGC AAGGGAATAC AAGTATATCC GCTTTGGAGG TCTTTTTGGT GGGAGCAATA
GCTAAGCTTG GAGCCACTGT GACAACATAT CCATTACTAG TTGTGAAGTC AAGGCTTCAA GCAAAACAGG AGATTGGTGG
AAATAACTCC TTAAGATACT CAGGTACTTT TGATGCTGTA CTTAAAATGA TCCGTTATGA AGGAATAACA GGCTTCTATA
AGGGGATGAG CACAAAGATA GTGCAGAGTG TTTTTGCAGC CTCTGTTCTA TTTATGATCA AAGAGGAGCT TGTTAAGGCT
TTTATAGTTC TAACCAATAA GAGCAAAAAA GTTTCATCAA ATTTGAGTAG TTGACATTTT TACCATATGA AAGCGATAAT
AAGTATATCA CTCGGTTTAC CTTTCCCTAT TGTTTATTCA CTGATTGTGG GGAGAGAGAG GTGAAGTCCT CACCAAAATA
ATGGATGAAG TTAACTCCAC TAGTGCAGAT GAGCCATCCT TATGTTATCC CTTTGGCATG CAGTGCTGCA GAACTCCTTG
GAATTTCTCA TAGTTCATTT CAAGAACCAA GGAACTGAGA ACATTCAACA ATCATGAGAG TGACTTCTTC CAACAGCAGT
GTTATGCAAG CATTCTTTTC CAAAGAATTA AAAACCAAAG TGCTTTGTGT ATAATTCTTG AATAAATTAA CAGACAATCA
TTATGCTGAG CCATTGAATT GCATGTATAT TGGTATGGTA AGAAAAGTTC ATATGTCATC ATGGATAAAT ACACTACAGT
GACAGATAAT TTTTTTTTCC ATCTGCAATG AGTTGTTTAT GTACCTTATG TTTGGTTGAT TTGAATGTGC TTGATTGAAA
ACTGGAAAGA 

>Vigan.04G266400.01
ATGTCAGAAT CAAACGCAAT TGCAAATGGA TTGGCTGGTG CAGGTGGTGG AATCATTGCT CAAATCATCA CTTATCCTCT
TCAAACGGTA AACACGCGTC AGCAAACTGA GAGAACACTC AAGAGGAACA AGCAAAGTTT GCCCTCTAAC ACAACCACTG
CTCCTGGCAC TCTTCTTCAG ATCTTTCAGG TCATTAGAAC TGAGGGTTGG GGTGGACTCT ACAGTGGCCT CAAGCCTTCT
CTTCTTGGAA CTGCTGCTTC TCAGGGCATT TACTACTATT TCTATCAAGT TTTCAAGAAC AAGGCAGTGG CGATTGCAGC
TGCACGGAAA GTGAAAGGGC GTGGAGATGG TACTGTTGGG ATGTTTGGTT GGCTTGTTGT GGCTGCAATT GCTGGGTCCT
TGAATGTGTT GCTGACAAAT CCAATATGGG TTTTAGTGAC TCGGATGCAG ACTCATACTC AAGCAGAAAG GAAAATTATG
GAGGAAAAGA AAGAAGCTTT AAGGAAGGCT GCTTCTGAAA GCGCCATAGC AGATTCCACA TTGCAAGATA AATTGGATGA
ACTGAATTCT ATAAAACCTC GACCATTTGG AACTATACAT GCAGCTAAAG AAGTCTACAA TGAAGCGGGT ACAGTAGGAT
TTTGGAAGGG TGTCTTCCCT GCCCTTATTA TGGTATGTAA TCCATCAATT CAGTTTATGA TTTATGAAAG CTCATTAAAG
CATCTAAGGG CAAAACGTGC CGCTAAGAAG CAAGGGAATA CAAGTATATC CGCTTTGGAG GTCTTTTTGG TGGGAGCAAT
AGCTAAGCTT GGAGCCACTG TGACAACATA TCCATTACTA GTTGTGAAGT CAAGGCTTCA AGCAAAACAG GAGATTGGTG
GAAATAACTC CTTAAGATAC TCAGGTACTT TTGATGCTGT ACTTAAAATG ATCCGTTATG AAGGAATAAC AGGCTTCTAT
AAGGGGATGA GCACAAAGAT AGTGCAGAGT GTTTTTGCAG CCTCTGTTCT ATTTATGATC AAAGAGGAGC TTGTTAAGGC
TTTTATAGTT CTAACCAATA AGAGCAAAAA AGTTTCATCA AATTTGAGTA GTTGA

>Vigan.04G266400.01
MSESNAIANG LAGAGGGIIA QIITYPLQTV NTRQQTERTL KRNKQSLPSN TTTAPGTLLQ IFQVIRTEGW GGLYSGLKPS
LLGTAASQGI YYYFYQVFKN KAVAIAAARK VKGRGDGTVG MFGWLVVAAI AGSLNVLLTN PIWVLVTRMQ THTQAERKIM
EEKKEALRKA ASESAIADST LQDKLDELNS IKPRPFGTIH AAKEVYNEAG TVGFWKGVFP ALIMVCNPSI QFMIYESSLK
HLRAKRAAKK QGNTSISALE VFLVGAIAKL GATVTTYPLL VVKSRLQAKQ EIGGNNSLRY SGTFDAVLKM IRYEGITGFY
KGMSTKIVQS VFAASVLFMI KEELVKAFIV LTNKSKKVSS NLSS*