GBrowse Details

Vigan.04G226100.01

Basic Information:
Name: Vigan.04G226100.01
Multiple alignment
Variant Information
Position: Chr04:33217261..33220655 (+ strand)
Length: 3395
Functional Information:
Description: Similar to Uncharacterized protein. [I1N7S1, Glycine max]
InterPro: Development/cell death domain (IPR013989)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:127.37,90.18,41.63,32.24,48.94,47.76,54.68,56.71
Arabidopsis thaliana homolog: AT3G27090.1
Automatic updates:
Name: NM_001252937 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max B2 protein-like (LOC100775724), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:33217261..33218202 (+ strand)
Length: 942
Type: five_prime_UTR
Position: Chr04:33218203..33218767 (+ strand)
Length: 565
Type: CDS
Position: Chr04:33218861..33218961 (+ strand)
Length: 101
Type: CDS
Position: Chr04:33219696..33219779 (+ strand)
Length: 84
Type: CDS
Position: Chr04:33219864..33219974 (+ strand)
Length: 111
Type: CDS
Position: Chr04:33220091..33220138 (+ strand)
Length: 48
Type: CDS
Position: Chr04:33220139..33220655 (+ strand)
Length: 517
Type: three_prime_UTR

>Vigan.04G226100.01 class=Sequence position=Chr04:33217261..33220655 (+ strand)
CAGCGAAGTC ATAAAAGGTA CTATCTGTTT CTCTCTCCTC ACATCTTCGG ATCCCTAAAT CTAGGGCTTC GTCTATTTCT
TCGGAATTCG TCTAGTCAGT TTCTTAATTT CGTTATCAAT TCTCGATTTG GAATCTCCGT CTCTGTTTAC TTTTCTTCTT
TGAAGTCGTG TTTTGCTCTC TTCACTGTGC TGATTTTGGT AATTTCTTAT TCTATCTGTG AATGCTCTCT TCGGATCCTC
GATTTCCTTC CTTGATCTTG GTTGTTTTGT TTAATTTTCG TCGTGCCTGC GGATATTTGT GCGAGATGTG AGTGAAGGTT
CTAGTTTTGT TTTATTTCTG TGTTCTTTTT TGTTGAGTTT GAACTTGCGT TCGTACTTTC GCTGTTTGAT GCTGGATTTG
TAATTGGGTT TGCTGCTGTG TGCATGGATA CTTGGATTTC GTGCGGAGTT GCATGAAAGG AAAGGGAGGA AACCAGTGTT
TTTGAAAATG AATTATGAGA TTTTTGAGAG CTCTTTTATT TGCTTTGTTT GTGATGGTTA GAATTAGAAA TTACTAGATT
TATGTTTTTT CCTTTTTTTG CTTTTGGGGT AATTGGAAGT TGCAAAAAGC CCACTACTAC GAAGTTTTAT AATCAATTAC
CCTTATTAGT CCTCAATATT GGTGTAATTT AAAAAACTTT AAGTAAGAAT TTTCGATTGC TGTAGTTGGC AATGGTACTC
CTCCAAATGT ATGGCAAATG TTGTTGTATG CTCATATGAA CTGTTATAAG TCTAGTTATG CGTTTGACAT ATGTCAGCAC
AAAAGAGGAA GATGTTGAAT TATTTTCATT TTTCCCAATT GGATGTTTGC TAACTATGTC CTGTTTATTG CTGTATTTTT
TCTGTTGATT TAATTCGTGA TGTGGTCTAT ATTGTGTTTA TAACTTGTCA GGGTTTCAAC AGATGGAAAA CATGCAGAGC
TTCTGGCAAT TGGGTGATGA GCTTCGTGGA CACTCAAAAG CGTCAGAGGA TCACAAGTGG TTAATGGTTG CTTCTAAGTT
GGCTGAACAG ACAAGATTGA AGGGGGAGCG TGTGAATAAC CTTGACCTTT CAAAGGGCCC CATTGAAACA AGGTCAAGGG
ATAAATTTGG GTTCCAGGAA GAGAACAAAT TTGATTCTCT CAACTTGAGC ATGTTGAACC TGGACTCTAA ATTTACTGAA
AATGTGAGCA AAAGCTCACT TCGGAATAGT GTTTACAGTA TGAATGCAGT GTATCAGAAA AACAATGCAA ACTTGGTGAG
TAATGTGAAC AGTAACAAGT ACAGTGGTAA TATTCAGCAT AACAAAGAGT CCAACAATAA CAGTGGCAAC AGCAATAACA
ATGAGAGCAA CAACTCAAAT TCAACTGACA AAAGGTTTAA GACCTTGCCT GCAGCCGAGA CACTCCCACG CAATGAGGTG
CTTGGAGGAT ACATATTTGT CTGTAACAAT GACACAATGC AGGAAGACTT GAAACGTCAG CTATTTGGTG TGTTTTTAAT
AAATGGAATC TGTTCTTCTG TCTTGGACAT TATTAATCAT ATACTTCGTG ATGACTGACT TTTCCAATCA TTTTTGGTAG
GCTTGCCTCC AAGGTATCGA GATTCTGTTC GGGCAATAAC ACCAGGATTA CCTCTATTTC TGTATAACTA TACTACTCAT
CAGCTGCATG GCATTTTTGA GGTAAGCTAT TCTAAATTTG TAACTACAGT TAATTATGTT GTGCTTCAGA CTATGCAGCA
TGTATCTTCT TATTTTAGGG CTATGAAATA TTGAAATTGT GTTCCTAGTT TAGAGGATAT TCACACAAAA TGGGGCTAAT
TGTAATTTCT CAAGGAGTTA CACCCAAGAA TAGCTATGAA AGCTATTTGT GTTGCCCAAT CGTTAGTGTC TGTGCTAAAC
ATGTTACGGG CATGGAAATA TTGTCTCGTT TCAGAAATAC AGAACCTCCT TCTTCATTGT TATTTATACA TTTAGAATAT
GTCTATATTA GATTATTTTA GATATTATTA TCTAATTGGT AGGCTTTTGT TGTTATGTTA ATTGATAGAA AAAAATTGAT
TTTAGAGGGG TTAACTTGTC AAGAATTTGT ATTTAGCTGC TGTTGCACAG CTAGTAATGG GGTTACCTAA TGCATAGGAT
AAAAATGGCA ATGTTCTAAT TTGGTCTCAT TTGTTTTTGG TTTTTTCTTT GCTTGGGTAT TCTTGTCTGA TTAGAGATTG
GGAATCTTGT ATTTGTTCTA TCTTTTGAAA AGACGTAGAT AGGTTTTCTG CCTTCTTTTG TATAATTGTT CATAACAACT
ATTCAAATGT AATGGCCAAA ATTGAGAAAG TTGATGATAG ATAAACTAAA TTTAGTTGAT GATAGATAAA CTAAATTTAG
TTGATTATTT TCTAACTTTG AGGCCTATGT TGCAGGCAGC AAGTTTTGGT GGCTCTAACA TAGATCCAAC TGCCTGGGAG
GATAAAAAAT GCAAAGGCGA ATCAAGGTTT CCAGCTCAGG TAGAATTACA ATTTTGAAAT GAGGAAGTCC GTTTACTAGC
TGTCATTCAA TTATCGAATA CATAATATTC CTTCTTCTCG TAGGTAAGAA TCCGTGTTAG GAAACTCTGC AAGGCATTGG
AAGAAGATTC GTTCAGGCCA GTATTGCATC ATTATGATGG TCCAAAGTTT CGTCTTGAGC TGTCAGTTCC AGAGGTATAT
AATTTGACTA TTGCTCTTTC TGTATTAAAA AAGAATTATT CTTTGACATT GAGTTGTCAC TGCTTGTTTC TCTCTCTTTG
ATGGGTGAAT TTTGTTATTG GATATTGCAG ACTCTGGATC TGTTGGACTT ATGTGAGCAA GCTGGTTCGG CAGCATAAGC
AAACAAACAA GGAATTTGCA AAATAGGTAG GTTTTGGTGT GCCAGCTGTG TGGTTTTGGC AGATTTTCCG TGAAGCGTAA
GCTTGGAAAT TAGTTTGTTG ATGGATCATC TTGGGGGAAG TAAAGGGAGC GTGTTGAGAG TGAGACCCTT TTGTCTGGTT
GGTGAATAAA TGTTGTGCTA TCTTATCCCC TGAAGATGCT TTGTAGCTGT TGCATGACAT TTAATACTTT TGTATGATTA
AGTTAGTACA GACCTGTATG CAATCAAAGA GACAACTGTT TGTACTGGTA TATCATGAAT TTGTTGAACT AAGCAAATAT
AAAATTTTTT AAGTTTCGGT TACTTCTAAA CTCTATGAGT TGGCTGAAGT GATCGTGGGG TCGTGGAAAA TAGATTATCT
CAATAATTGA TTACATCTGT AATCTGCTTT CATTACAATA GATTATTCAA TATCAGTTTG TTGTTATGCT AAGTTTAGTA
AAATATAGTT ATGAAATAAT TAATTTTGAT TGAGG

>Vigan.04G226100.01
CAGCGAAGTC ATAAAAGGTA CTATCTGTTT CTCTCTCCTC ACATCTTCGG ATCCCTAAAT CTAGGGCTTC GTCTATTTCT
TCGGAATTCG TCTAGTCAGT TTCTTAATTT CGTTATCAAT TCTCGATTTG GAATCTCCGT CTCTGTTTAC TTTTCTTCTT
TGAAGTCGTG TTTTGCTCTC TTCACTGTGC TGATTTTGGT AATTTCTTAT TCTATCTGTG AATGCTCTCT TCGGATCCTC
GATTTCCTTC CTTGATCTTG GTTGTTTTGT TTAATTTTCG TCGTGCCTGC GGATATTTGT GCGAGATGTG AGTGAAGGTT
CTAGTTTTGT TTTATTTCTG TGTTCTTTTT TGTTGAGTTT GAACTTGCGT TCGTACTTTC GCTGTTTGAT GCTGGATTTG
TAATTGGGTT TGCTGCTGTG TGCATGGATA CTTGGATTTC GTGCGGAGTT GCATGAAAGG AAAGGGAGGA AACCAGTGTT
TTTGAAAATG AATTATGAGA TTTTTGAGAG CTCTTTTATT TGCTTTGTTT GTGATGGTTA GAATTAGAAA TTACTAGATT
TATGTTTTTT CCTTTTTTTG CTTTTGGGGT AATTGGAAGT TGCAAAAAGC CCACTACTAC GAAGTTTTAT AATCAATTAC
CCTTATTAGT CCTCAATATT GGTGTAATTT AAAAAACTTT AAGTAAGAAT TTTCGATTGC TGTAGTTGGC AATGGTACTC
CTCCAAATGT ATGGCAAATG TTGTTGTATG CTCATATGAA CTGTTATAAG TCTAGTTATG CGTTTGACAT ATGTCAGCAC
AAAAGAGGAA GATGTTGAAT TATTTTCATT TTTCCCAATT GGATGTTTGC TAACTATGTC CTGTTTATTG CTGTATTTTT
TCTGTTGATT TAATTCGTGA TGTGGTCTAT ATTGTGTTTA TAACTTGTCA GGGTTTCAAC AGATGGAAAA CATGCAGAGC
TTCTGGCAAT TGGGTGATGA GCTTCGTGGA CACTCAAAAG CGTCAGAGGA TCACAAGTGG TTAATGGTTG CTTCTAAGTT
GGCTGAACAG ACAAGATTGA AGGGGGAGCG TGTGAATAAC CTTGACCTTT CAAAGGGCCC CATTGAAACA AGGTCAAGGG
ATAAATTTGG GTTCCAGGAA GAGAACAAAT TTGATTCTCT CAACTTGAGC ATGTTGAACC TGGACTCTAA ATTTACTGAA
AATGTGAGCA AAAGCTCACT TCGGAATAGT GTTTACAGTA TGAATGCAGT GTATCAGAAA AACAATGCAA ACTTGGTGAG
TAATGTGAAC AGTAACAAGT ACAGTGGTAA TATTCAGCAT AACAAAGAGT CCAACAATAA CAGTGGCAAC AGCAATAACA
ATGAGAGCAA CAACTCAAAT TCAACTGACA AAAGGTTTAA GACCTTGCCT GCAGCCGAGA CACTCCCACG CAATGAGGTG
CTTGGAGGAT ACATATTTGT CTGTAACAAT GACACAATGC AGGAAGACTT GAAACGTCAG CTATTTGGCT TGCCTCCAAG
GTATCGAGAT TCTGTTCGGG CAATAACACC AGGATTACCT CTATTTCTGT ATAACTATAC TACTCATCAG CTGCATGGCA
TTTTTGAGGC AGCAAGTTTT GGTGGCTCTA ACATAGATCC AACTGCCTGG GAGGATAAAA AATGCAAAGG CGAATCAAGG
TTTCCAGCTC AGGTAAGAAT CCGTGTTAGG AAACTCTGCA AGGCATTGGA AGAAGATTCG TTCAGGCCAG TATTGCATCA
TTATGATGGT CCAAAGTTTC GTCTTGAGCT GTCAGTTCCA GAGACTCTGG ATCTGTTGGA CTTATGTGAG CAAGCTGGTT
CGGCAGCATA AGCAAACAAA CAAGGAATTT GCAAAATAGG TAGGTTTTGG TGTGCCAGCT GTGTGGTTTT GGCAGATTTT
CCGTGAAGCG TAAGCTTGGA AATTAGTTTG TTGATGGATC ATCTTGGGGG AAGTAAAGGG AGCGTGTTGA GAGTGAGACC
CTTTTGTCTG GTTGGTGAAT AAATGTTGTG CTATCTTATC CCCTGAAGAT GCTTTGTAGC TGTTGCATGA CATTTAATAC
TTTTGTATGA TTAAGTTAGT ACAGACCTGT ATGCAATCAA AGAGACAACT GTTTGTACTG GTATATCATG AATTTGTTGA
ACTAAGCAAA TATAAAATTT TTTAAGTTTC GGTTACTTCT AAACTCTATG AGTTGGCTGA AGTGATCGTG GGGTCGTGGA
AAATAGATTA TCTCAATAAT TGATTACATC TGTAATCTGC TTTCATTACA ATAGATTATT CAATATCAGT TTGTTGTTAT
GCTAAGTTTA GTAAAATATA GTTATGAAAT AATTAATTTT GATTGAGG

>Vigan.04G226100.01
ATGGAAAACA TGCAGAGCTT CTGGCAATTG GGTGATGAGC TTCGTGGACA CTCAAAAGCG TCAGAGGATC ACAAGTGGTT
AATGGTTGCT TCTAAGTTGG CTGAACAGAC AAGATTGAAG GGGGAGCGTG TGAATAACCT TGACCTTTCA AAGGGCCCCA
TTGAAACAAG GTCAAGGGAT AAATTTGGGT TCCAGGAAGA GAACAAATTT GATTCTCTCA ACTTGAGCAT GTTGAACCTG
GACTCTAAAT TTACTGAAAA TGTGAGCAAA AGCTCACTTC GGAATAGTGT TTACAGTATG AATGCAGTGT ATCAGAAAAA
CAATGCAAAC TTGGTGAGTA ATGTGAACAG TAACAAGTAC AGTGGTAATA TTCAGCATAA CAAAGAGTCC AACAATAACA
GTGGCAACAG CAATAACAAT GAGAGCAACA ACTCAAATTC AACTGACAAA AGGTTTAAGA CCTTGCCTGC AGCCGAGACA
CTCCCACGCA ATGAGGTGCT TGGAGGATAC ATATTTGTCT GTAACAATGA CACAATGCAG GAAGACTTGA AACGTCAGCT
ATTTGGCTTG CCTCCAAGGT ATCGAGATTC TGTTCGGGCA ATAACACCAG GATTACCTCT ATTTCTGTAT AACTATACTA
CTCATCAGCT GCATGGCATT TTTGAGGCAG CAAGTTTTGG TGGCTCTAAC ATAGATCCAA CTGCCTGGGA GGATAAAAAA
TGCAAAGGCG AATCAAGGTT TCCAGCTCAG GTAAGAATCC GTGTTAGGAA ACTCTGCAAG GCATTGGAAG AAGATTCGTT
CAGGCCAGTA TTGCATCATT ATGATGGTCC AAAGTTTCGT CTTGAGCTGT CAGTTCCAGA GACTCTGGAT CTGTTGGACT
TATGTGAGCA AGCTGGTTCG GCAGCATAA

>Vigan.04G226100.01
MENMQSFWQL GDELRGHSKA SEDHKWLMVA SKLAEQTRLK GERVNNLDLS KGPIETRSRD KFGFQEENKF DSLNLSMLNL
DSKFTENVSK SSLRNSVYSM NAVYQKNNAN LVSNVNSNKY SGNIQHNKES NNNSGNSNNN ESNNSNSTDK RFKTLPAAET
LPRNEVLGGY IFVCNNDTMQ EDLKRQLFGL PPRYRDSVRA ITPGLPLFLY NYTTHQLHGI FEAASFGGSN IDPTAWEDKK
CKGESRFPAQ VRIRVRKLCK ALEEDSFRPV LHHYDGPKFR LELSVPETLD LLDLCEQAGS AA*