GBrowse Details

Vigan.04G142600.01

Basic Information:
Name: Vigan.04G142600.01
Multiple alignment
Variant Information
Position: Chr04:17751659..17752790 (+ strand)
Length: 1132
Functional Information:
Description: Hypothetical protein.
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.43,4.60,5.47,0.23,1.53,10.57,4.26,2.71
Automatic updates:
Name: NM_001248633 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527657 (LOC100527657), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:17751659..17751854 (+ strand)
Length: 196
Type: five_prime_UTR
Position: Chr04:17751855..17752137 (+ strand)
Length: 283
Type: CDS
Position: Chr04:17752433..17752578 (+ strand)
Length: 146
Type: CDS
Position: Chr04:17752579..17752790 (+ strand)
Length: 212
Type: three_prime_UTR

>Vigan.04G142600.01 class=Sequence position=Chr04:17751659..17752790 (+ strand)
ACAAATGTGT AAAGTTACAA CATTTCGAAT GGTGCTTTAT GCTTATGTGA AATGTATAAT ATTATATAAG AAAAGGGGCA
TATGAAGTTC TACATGTTGG AACCAGAATT TGTTTATCTC TTATTCCAAC CATTTTTGGT AAAAAAAGGC TTCTAAATCC
ATACACAACA GAAAATTTGT GCCTTCGTCT TGAAGCATGG AAGATCATGG GCAGAACCCA AGGAAAAGAC ACAATGTTTT
TGGTGTGTTC GTGGATAAAT CACTTGGTCA CCCATCTTCT GTTGCAGAGG ACCATGATCC TAAGAAGCTT AAACACAATT
CTGAAGCCCC ATTATCATCA ATAGATCACC AAGCACCTGC CTTAGCTCTT CCCAATATGT TGGTTTCTGC TTTTGAGGAG
AACACCACAG ATGGTATCAA ATTTCAACTC TTTGTGAGCA AATCTTACAG TGCATCCACT TCCACTTCCC CTCCACCAGG
TCAGTTTTTG TCTAGATGGT TTATTCTTTT GGAGAACTGC GTAGTAAAAA ACTCAATTTC TGATCTCGGA GAGTATCAAT
GAATTGATGA TTTTGATCAC ATGACTAGTT ATGAATGTCA TGTCATGAAA CTAATAAGAA AAACCATTTA TAAGGTAACT
AGGTAGTTGT TTGGTTAGAG ACACTTAACT CGATTCACTA CTTTCATTGA ATTCAAACAT GAAATTTCAA TTTGCCAATA
GGCTATATCC ATAGTAAGTT TGTGAATGGA AGTGCAATTT TCTTTTTGTT GCAGTATACA CATTGAAAGT CACAAGTGCT
TCAAACAACA ATACGGAAGT TGAACCTGCA GGGAACATAG CTGATAAAGG AGTAGCACCA GTGTTGACAG AAACGAGAAT
AGTAGCTGAG GGTCAATTTA TGCTACGCTC TAGGCTCTAA TATTATCTTT GAAGCTTGTC AAGTACTTCA ACTTAGAAGG
TGTTCATTTA AGTTTGTTAA TGCAATACTT TCCAATACAA CTATTATATT TTTCAGTCTT TGTTTTCTAT TAGCTTTACC
CTGTAAGAAA ATATGGATTT ATGGAGTAAG CAATGCTCTA TTCTCGTATC ATTTCTGGAA CTTATAATAA TCAATTCAAA
TGCGTTGCCA AA

>Vigan.04G142600.01
ACAAATGTGT AAAGTTACAA CATTTCGAAT GGTGCTTTAT GCTTATGTGA AATGTATAAT ATTATATAAG AAAAGGGGCA
TATGAAGTTC TACATGTTGG AACCAGAATT TGTTTATCTC TTATTCCAAC CATTTTTGGT AAAAAAAGGC TTCTAAATCC
ATACACAACA GAAAATTTGT GCCTTCGTCT TGAAGCATGG AAGATCATGG GCAGAACCCA AGGAAAAGAC ACAATGTTTT
TGGTGTGTTC GTGGATAAAT CACTTGGTCA CCCATCTTCT GTTGCAGAGG ACCATGATCC TAAGAAGCTT AAACACAATT
CTGAAGCCCC ATTATCATCA ATAGATCACC AAGCACCTGC CTTAGCTCTT CCCAATATGT TGGTTTCTGC TTTTGAGGAG
AACACCACAG ATGGTATCAA ATTTCAACTC TTTGTGAGCA AATCTTACAG TGCATCCACT TCCACTTCCC CTCCACCAGT
ATACACATTG AAAGTCACAA GTGCTTCAAA CAACAATACG GAAGTTGAAC CTGCAGGGAA CATAGCTGAT AAAGGAGTAG
CACCAGTGTT GACAGAAACG AGAATAGTAG CTGAGGGTCA ATTTATGCTA CGCTCTAGGC TCTAATATTA TCTTTGAAGC
TTGTCAAGTA CTTCAACTTA GAAGGTGTTC ATTTAAGTTT GTTAATGCAA TACTTTCCAA TACAACTATT ATATTTTTCA
GTCTTTGTTT TCTATTAGCT TTACCCTGTA AGAAAATATG GATTTATGGA GTAAGCAATG CTCTATTCTC GTATCATTTC
TGGAACTTAT AATAATCAAT TCAAATGCGT TGCCAAA

>Vigan.04G142600.01
ATGGAAGATC ATGGGCAGAA CCCAAGGAAA AGACACAATG TTTTTGGTGT GTTCGTGGAT AAATCACTTG GTCACCCATC
TTCTGTTGCA GAGGACCATG ATCCTAAGAA GCTTAAACAC AATTCTGAAG CCCCATTATC ATCAATAGAT CACCAAGCAC
CTGCCTTAGC TCTTCCCAAT ATGTTGGTTT CTGCTTTTGA GGAGAACACC ACAGATGGTA TCAAATTTCA ACTCTTTGTG
AGCAAATCTT ACAGTGCATC CACTTCCACT TCCCCTCCAC CAGTATACAC ATTGAAAGTC ACAAGTGCTT CAAACAACAA
TACGGAAGTT GAACCTGCAG GGAACATAGC TGATAAAGGA GTAGCACCAG TGTTGACAGA AACGAGAATA GTAGCTGAGG
GTCAATTTAT GCTACGCTCT AGGCTCTAA

>Vigan.04G142600.01
MEDHGQNPRK RHNVFGVFVD KSLGHPSSVA EDHDPKKLKH NSEAPLSSID HQAPALALPN MLVSAFEENT TDGIKFQLFV
SKSYSASTST SPPPVYTLKV TSASNNNTEV EPAGNIADKG VAPVLTETRI VAEGQFMLRS RL*