GBrowse Details

Vigan.04G070700.01

Basic Information:
Name: Vigan.04G070700.01
Multiple alignment
Variant Information
Position: Chr04:6757081..6760375 (+ strand)
Length: 3295
Functional Information:
Description: Similar to Uncharacterized protein. [G7KQL7, Medicago truncatula]
GO: Biological Process: cell redox homeostasis (GO:0045454)
Molecular Function: electron carrier activity (GO:0009055)
Molecular Function: protein disulfide oxidoreductase activity (GO:0015035)
InterPro: Glutaredoxin (IPR002109)
Monothiol glutaredoxin-related (IPR004480)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:33.77,20.40,28.13,84.29,30.27,56.46,44.20,28.84
Arabidopsis thaliana homolog: AT3G54900.1
Automatic updates:
Name: NM_001248888 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305724 (LOC100305724), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001249335 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500060 (LOC100500060), mRNA; nuclear gene for chloroplast product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:6757081..6757250 (+ strand)
Length: 170
Type: five_prime_UTR
Position: Chr04:6757251..6757455 (+ strand)
Length: 205
Type: CDS
Position: Chr04:6758235..6758504 (+ strand)
Length: 270
Type: CDS
Position: Chr04:6759572..6759627 (+ strand)
Length: 56
Type: CDS
Position: Chr04:6759628..6760375 (+ strand)
Length: 748
Type: three_prime_UTR

>Vigan.04G070700.01 class=Sequence position=Chr04:6757081..6760375 (+ strand)
TGAAACAAAA GGTTCTCTAT CAAATTGATA AAACCATAAT TTATGAGTAT ATGGTGTCTA ATTATTATAC TATATAATTG
AAAACATAGT ATTGTTGTGG TGGAAGAGAG TAGATATTTG GAGCAGAGTG TGGTGGGTGA GTAGTTTTTT GTTTGGAAGG
AGAAGCAAAC ATGTCTTACT GTGCTAAGCC TTTGACCTTG CAACTGCAGT TGCACTCAAG AACATCATCG TCATCGTTCC
AATCCCATGT TGGAGGAGTA ACAGTAACAA CCTCAACACT GTCTCTTCGG CCCTCTCCTT CTCTTGTTTT CACCCACAAC
CTCCATTTCC AACCCAAAAT CAAACGCGCT TCCACAACCA TTCGATGCGC CTCTGGTACT GCTACTCTTC TTCCCTTTCA
TGAGTTTTCG TTTAAACGCG CTAAAGTTTC AATCTTTAAT GTTCCCATAT GAATTGCTAG CTTCAACTTT TCACAATTCA
CTGTAATCCC CCTTTGGGAG TAGCTCCAAT TCAATGAGTC AGGGATAGTA AGGATGATGA AATATGTACC CTATATCAAT
TCTTTTGGAG ATGTGCAGTT ACTTCACCAT TTTTTTAATA TTTTTTTCCT ATCAGAATTG GGGTTTTATC TCATTAATCT
GTTTACTAAA AGTTTGGACC GTATGCGTAC TAAATGTGGA GATGCTCCAA TTCTGATTGG AGAACATGGA AACATTTAGA
TTTCTTTGAT ATCTATTTTT AGAAACTACT TTTAGTTTTC AAAATGCAAC TAGGTTGTAT AGACAGCTGG TGCTGGGCGG
TACAAGAGAC TTATATGAGT GTGGAATTGA GGGAGAGGTT GGACAAGATG AAAACAGAAG AAGAAAAATG AGAAAACAAC
TTACAATTGC TTTCTTATGT TTTCTTTTTT TGGTTTTGAA ACGCTTGTTC TGGAAACTAT TTTCGAAAAA CGTAATCAAT
TATGGATCAG AAATTGATTG TTAGATAAGT GAATAGTGTG TGAAATTGTG TTAAAACAAT TTTAGGACCA AAAAGTGAAA
AAGGAATGGA ACTGACTCTT TAGAACTGTG TTTAGCTTTT GTATAACTTT TTTAACGATT TCAGACGCTT GAATTATATA
ATAAGTTTTA ACTTTGGGTT TTGGTTTGTT TTAGCGTTGA CTCCTCAATT GAAGTCTACC TTGGATACAG TTATTGCTTC
AAATAAAATA GTTCTGTTTA TGAAGGGAAC TAAGGACTTT CCACAGTGTG GGTTCTCAAA CACAGTGGTG CAAATATTGA
AGTCTCTAAA TGTGCCTTTT GAAACCTTAA ACGTGCTTGA AAATGACATG TTACGCCAAG GACTGAAGGA GTACTCCAGT
TGGCCTACCT TTCCTCAACT CTACATAGAT GGAGAGTTTT TTGGTGGCTG TGATATCACT GTTGGTATGT CATATGTGAC
TTAAGTTTTC AGTTTAACAG TTAATTGTCC TCATCGTTGT CTGCAACTAT AATGACCTCA TCATTACCTT GTTTTTGTGA
TGCTTATAAG TTGATATTGC CTCACTAGTG GAATGATTTA AACATGATTG GGACTAACCG GCTGTTGCAA AAGCTAATAA
AGTTTTAGAT GAAGACATGC CAATAGTTTA TATCATATCT CTAATAGTGA TGCAAAGAGA TATTAATTTA GTAATTTTAA
ATGAGAGAGC CAAAATAGAC ATATTAAAGG GTACAGCTAT ATAATAAATT TCACATTTTA CATTTGACCG AGGAAACATG
CAGACCAATT GCTTCTAGTA ATTGGCATCT TAAAGTTGTT GGAGGTATTG TTGCATACAA CTTAGAGGCA GTACCTAGAT
TTTTTTGGTG TTGTTCTCCA ATCAAAATTG AAGTTTCACT TCTTATATAA TAAAGGTTTA CCAAAGATAA AACTCCCATT
CTAATGGAAG AACAATGCCC AAAGCACATG GGAAATTGCA TGTTAGCTTT TTCCAATATT ATTCAAGTAT CAGCCTACAC
TACAACTTTG GAGATTGAAA ACTCACTTGC TTGAACTTGA AAGGAAAACA AATCATATTA AGTGACTGGT TTAAGTGAAA
AATTACAAAA GCCAAAGCTG AACTGATTGA TTTAAATGTG TAACATGATG ATAAAAGTTG TATTATACCG TGACAAAGAC
ATTGTTTTAT AATCATCTAT TGCCAAATTG ATGCCTACAA ATTGCTGGAG TACACTGCAC ATTAATCTTT ATTTCTTACA
TGCTTTATTA ACCATATACA TACATATCTT AGCTCCTTGC AATCGATAAT AATATAGTTG AAAGAAACAA AAGTTCTTGC
TTTCGAACAG GTCCTCCAGT TTTGATCTAT TTATCCTGAT GTTATAATTG ACTGCTTAAG AATCAGTTTT TAGCTTTATC
TTTTTACTCT AGATCAAACC ATATTGTTAC ATCAACGGTA GATTTATAGG CAATACTTGC CCTCTTCTCA CTTTTTCTTG
TATGGCTGCA GAGGCATATA AGAACGGGGA ATTGCAGGAG TTGTTGGAAA AGGCAATGTT ATCCTGAAAC CATGGAAGGA
ATGAGAGGAC TTTCCAAGTT TGTAATCTTC CCTAAGTTCT ACTGTGGCTC AGTGATAATG GACCAAGTAA ATTGTCCAAT
GTTTTCTCGT GTCCACAAAT GCCTATTATG ATTACTGCAA AAGAAATCCT GGTATTTGAG TATAAAGCAG ACAACTCATT
TGATGATATC TCATTAAATA GACTATTTAT TGTTTTACTA GTTGCTACTG CAAATCTATT GAATAAACTA TTCGAAACTG
ACATGTTTCT GCTACCTGTC GTATCTTGTA AACATCTTTT TTTTTGTTTT TGTTTGAAGA ATTAGTTTAA TAATGATGGA
AGTACCTTGC TCTAGATTGT TCCATTACAT ATTCAACATG TAAAATCCAA TTAAATATAA CTCAACTTTT GAAGCTTAGC
CTTGACGTGC CATTGCTCAT GAAGGGGCTG GTGGGATATA TCTCATACAT ACATGTCATT AATGGAAAAG AACATACTTT
GTAAGTATGG TTATGGAGTT AGCACAAGTA ATTACACTTT TGAAAGGTTA TGGCAATGAT GGCCAATTCC ATAATACCTA
TTTAAATAAT GGTGTTTAAT ATCCATGCAG TTGGTTTTGG TGTGTGTACA TACAAATGGT TGTTTTTCTG GTTGGTTTGT
GAAATTGGAT TACATCCATT CCATCCACCC AAAGGAAAAA GAGAAGTGAT AGTTATGCAT TTGCTAACAC TTTCTTTTCA
ACATGTTTAC TGATT

>Vigan.04G070700.01
TGAAACAAAA GGTTCTCTAT CAAATTGATA AAACCATAAT TTATGAGTAT ATGGTGTCTA ATTATTATAC TATATAATTG
AAAACATAGT ATTGTTGTGG TGGAAGAGAG TAGATATTTG GAGCAGAGTG TGGTGGGTGA GTAGTTTTTT GTTTGGAAGG
AGAAGCAAAC ATGTCTTACT GTGCTAAGCC TTTGACCTTG CAACTGCAGT TGCACTCAAG AACATCATCG TCATCGTTCC
AATCCCATGT TGGAGGAGTA ACAGTAACAA CCTCAACACT GTCTCTTCGG CCCTCTCCTT CTCTTGTTTT CACCCACAAC
CTCCATTTCC AACCCAAAAT CAAACGCGCT TCCACAACCA TTCGATGCGC CTCTGCGTTG ACTCCTCAAT TGAAGTCTAC
CTTGGATACA GTTATTGCTT CAAATAAAAT AGTTCTGTTT ATGAAGGGAA CTAAGGACTT TCCACAGTGT GGGTTCTCAA
ACACAGTGGT GCAAATATTG AAGTCTCTAA ATGTGCCTTT TGAAACCTTA AACGTGCTTG AAAATGACAT GTTACGCCAA
GGACTGAAGG AGTACTCCAG TTGGCCTACC TTTCCTCAAC TCTACATAGA TGGAGAGTTT TTTGGTGGCT GTGATATCAC
TGTTGAGGCA TATAAGAACG GGGAATTGCA GGAGTTGTTG GAAAAGGCAA TGTTATCCTG AAACCATGGA AGGAATGAGA
GGACTTTCCA AGTTTGTAAT CTTCCCTAAG TTCTACTGTG GCTCAGTGAT AATGGACCAA GTAAATTGTC CAATGTTTTC
TCGTGTCCAC AAATGCCTAT TATGATTACT GCAAAAGAAA TCCTGGTATT TGAGTATAAA GCAGACAACT CATTTGATGA
TATCTCATTA AATAGACTAT TTATTGTTTT ACTAGTTGCT ACTGCAAATC TATTGAATAA ACTATTCGAA ACTGACATGT
TTCTGCTACC TGTCGTATCT TGTAAACATC TTTTTTTTTG TTTTTGTTTG AAGAATTAGT TTAATAATGA TGGAAGTACC
TTGCTCTAGA TTGTTCCATT ACATATTCAA CATGTAAAAT CCAATTAAAT ATAACTCAAC TTTTGAAGCT TAGCCTTGAC
GTGCCATTGC TCATGAAGGG GCTGGTGGGA TATATCTCAT ACATACATGT CATTAATGGA AAAGAACATA CTTTGTAAGT
ATGGTTATGG AGTTAGCACA AGTAATTACA CTTTTGAAAG GTTATGGCAA TGATGGCCAA TTCCATAATA CCTATTTAAA
TAATGGTGTT TAATATCCAT GCAGTTGGTT TTGGTGTGTG TACATACAAA TGGTTGTTTT TCTGGTTGGT TTGTGAAATT
GGATTACATC CATTCCATCC ACCCAAAGGA AAAAGAGAAG TGATAGTTAT GCATTTGCTA ACACTTTCTT TTCAACATGT
TTACTGATT

>Vigan.04G070700.01
ATGTCTTACT GTGCTAAGCC TTTGACCTTG CAACTGCAGT TGCACTCAAG AACATCATCG TCATCGTTCC AATCCCATGT
TGGAGGAGTA ACAGTAACAA CCTCAACACT GTCTCTTCGG CCCTCTCCTT CTCTTGTTTT CACCCACAAC CTCCATTTCC
AACCCAAAAT CAAACGCGCT TCCACAACCA TTCGATGCGC CTCTGCGTTG ACTCCTCAAT TGAAGTCTAC CTTGGATACA
GTTATTGCTT CAAATAAAAT AGTTCTGTTT ATGAAGGGAA CTAAGGACTT TCCACAGTGT GGGTTCTCAA ACACAGTGGT
GCAAATATTG AAGTCTCTAA ATGTGCCTTT TGAAACCTTA AACGTGCTTG AAAATGACAT GTTACGCCAA GGACTGAAGG
AGTACTCCAG TTGGCCTACC TTTCCTCAAC TCTACATAGA TGGAGAGTTT TTTGGTGGCT GTGATATCAC TGTTGAGGCA
TATAAGAACG GGGAATTGCA GGAGTTGTTG GAAAAGGCAA TGTTATCCTG A

>Vigan.04G070700.01
MSYCAKPLTL QLQLHSRTSS SSFQSHVGGV TVTTSTLSLR PSPSLVFTHN LHFQPKIKRA STTIRCASAL TPQLKSTLDT
VIASNKIVLF MKGTKDFPQC GFSNTVVQIL KSLNVPFETL NVLENDMLRQ GLKEYSSWPT FPQLYIDGEF FGGCDITVEA
YKNGELQELL EKAMLS*