GBrowse Details

Vigan.04G065600.01

Basic Information:
Name: Vigan.04G065600.01
Multiple alignment
Variant Information
Position: Chr04:6232779..6238403 (- strand)
Length: 5625
Functional Information:
Description: Similar to Uncharacterized protein. [K7MUH9, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: 2-phosphoglycolate phosphatase, eukaryotic (IPR006349)
HAD-superfamily hydrolase, subfamily IIA (IPR006357)
HAD-like domain (IPR023214)
Nitrophenylphosphatase-like domain (IPR023215)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.74,2.58,50.78,531.82,10.39,20.72,6.22,69.34
Arabidopsis thaliana homolog: AT5G36700.1, AT5G36790.1
Automatic updates:
Name: NM_001289391 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max phosphoglycolate phosphatase 1B, chloroplastic-like (LOC100820476), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:6232779..6232962 (- strand)
Length: 184
Type: three_prime_UTR
Position: Chr04:6232963..6233173 (- strand)
Length: 211
Type: CDS
Position: Chr04:6233816..6233915 (- strand)
Length: 100
Type: CDS
Position: Chr04:6234187..6234284 (- strand)
Length: 98
Type: CDS
Position: Chr04:6234838..6234890 (- strand)
Length: 53
Type: CDS
Position: Chr04:6234979..6235038 (- strand)
Length: 60
Type: CDS
Position: Chr04:6235425..6235496 (- strand)
Length: 72
Type: CDS
Position: Chr04:6236787..6236858 (- strand)
Length: 72
Type: CDS
Position: Chr04:6236954..6237046 (- strand)
Length: 93
Type: CDS
Position: Chr04:6237164..6237231 (- strand)
Length: 68
Type: CDS
Position: Chr04:6237930..6238320 (- strand)
Length: 391
Type: CDS
Position: Chr04:6238321..6238403 (- strand)
Length: 83
Type: five_prime_UTR

>Vigan.04G065600.01 class=Sequence position=Chr04:6232779..6238403 (- strand)
ATAAGATCCA CAAAAAATTC AGGTTGGGCT GGAGATTATG ATCCAAAAGC GCACGAACTT GGTCCACTCA AAACCTATGG
CTTATGTTCG ATCTCTCAAC CATTTCACCT TCGTATCACA TGCTGCACCC ATGCACACAC CACACAAATA ATAACCCAAA
AAAAAAAAAA CAAAAAACAG CAATTCTGAA GGAAATGCTC AGAAGCAGCA CTTTAACACA GAGTGTTACA GTCACCTGTG
TTCGTCACAG TCACAGACAA TGGCACCAAT CAATTCCTGT GAACTATAGA GTCTGTGACG CTTCTCGTAA CACTCTGTCA
TCGAACTCCG CGATCTTCAA GTGGAAGAGA AAATCGAATA CTAAACGTAA CAGCTCTGGA ATGGGAACCT TCACCACGCG
CGCGTTGGCG CAGCCGCTGA GGAACGCCGA TGAGCTCATC GATTCCGTCG AGACGTTTAT CTTCGACTGT GACGGTATGT
TACTGAATTC GAACGCTTCA TGTATTTGTG TTTCGCACAC ATCATTTCAT TTTTATACCG ATTCAGGAAG AGTTTTACTT
TTATACATTT TTCATTGTAA ATGTTTTTAT ATTCTCAGTT CAATTAATTA GAGATCAATT TAAATATAAC TATTGTAAAA
TTATTTAGCT ATTTTAAAAA AGTGGTTAAT CTTTTACTTA TTTTTATGTA TATGCCAAAA CTGAAACTAG ACTAAGCTCG
AAATGAAGTC GATTATAGAG ATTAAACGAT TAATTTGACA AAAAAAAAAA CTCTATACTG TTTAATTTTT GTATGCTATT
AGATCAAATT CTTTTACATT ATCAATCAAT CAGAAGTCAA CTTTTGAAAT AGTTATTATA CAATTAAATA AAACTCTATA
ATAATAAACT GCTAATACGT GATTATCGGT GCATTTTAGA TAAATTGCAG AGAAAGTTGT TTTTGAATGT ATGAGTTTAA
TATTCCAGCT TGTCCGTGTC ATGTTAATGG ATATCATACA TGATATTTGT GTACAAAAGT GACCTGATTA ATGGAAAAAA
TGGTGATGCT TGATTTTTTT TTTCTGAGGT CCTTCGGGGA AAAATTACAA TATCAATATG ATTCCAACTT CTTGTTTCAA
AAGTATATTG ACAAAATGCG AATTTCCTTT ACCATTAAAA CTTAATTCAC AGGAGTTATA TGGAAAGGGG ACAAATTAAT
AGGAGGAGTG CCCGAAACAC TTGACATGCT CCGGTCAAAG GTTTGTGTGC TAATGTAGGC ACTAGGCTTT TACCTGCAAA
GGTCAATGTG AACTATCCTT CAATTTATTA TTGTTCATTT CTGGCAAAAA AGTCTGAGGT TTGTGATCAA TCTCTAGGGA
AAAAGATTAG TTTTTGTCAC CAACAACTCA ACCAAGTCTA GGAAGCAGTA TGGAAAGAAG TTTGAATCCC TTGGCCTGAA
TGTCAGCGAG GTTAGTCCAC ATTTGTTGTT CCTCTCTTTG TTAGCACTGA AATTGTTTAG TGAATAATAA TGAATTTGTA
ATCTTTAACT ATTGTGTTAT TTCAGGAGGA GATTTTTGCG TCATCCTTTG CTGCTGCTGC ATATCTGAAG TCCATTGATT
TCCCAAAAGA TAAAAAGGTA AGATATAATC TTTTGGTTTG CAGTAGGACC CAAACTATTA TTAAGTATTT AATCTAGGAA
CACTTTTAAC CTCAAATGGT ACCCTAAGTT AACATCAGGA GTAACTAAAC GCTGGCCTCC AGGTTAACAC TTACTATCAT
GACATGCCTT TTGTTTGGGA GATTACACTT ATTCCCCATG CTTTGTTATT TTGAAAGGAC CATTTTGTAA AGGAAGGGAT
ATGTGTGATT CATTTTTTTC ATTTAACAGA AAAGGTTATC CCAGAGTAAG AGCATTCCAT TAAGTAAGGA ACGCTAGATT
AATTTTCCCA AACACGACAA GTCTCAATAC ATTCCACTTA AACATAAAAG TTCACAAAAT CTTACATTTA AGTTTTGATT
TGTTTAATAC CCCTTCGCTG AATTTATCAA GGTTATCCAT TATATCCTTA CGGACATGTA TATTTATATG AAAGTTTCAT
TGATGTAGTT GACTAGTAAA GAGGCTCTTT GTTTCTGCAA TGAACCTTTC TTCCCTTAAA ATTCTTCCCC GTAACTTTGT
TTGGCGTTTT ATCTCAACAT TTGTTGAAAT ATATTCTCTC TACCTTTATA ATTATGCCAA CTATTTTTAT GCTGGAATCT
TAACATGTTT CATTTTATCT GTGGTATTTT CTCCTGGCAT AAAGTTTCCT ATTTGTTACT TCTATTGGTT GAAAGCGAAA
ATACATTTAA CTTGAAATCC CTTAATTCCT GAAATGCAAA GTGTCCTTTA CTCGCATTCC TTTTGTAAAG CTGTATCCAT
TAGCAGAAGC TGCATCTATT TTTGTGTTAG CTGTCATGAT GGGAGAATGA ATGGCGGTGT AACAGATGAT TTTCTTGTAG
GTTTAAAGGG CATATGCAAA CCTAAGAAAA TTGCAGAAGA AACAATTAGA AAAGACCTTG CCCAATATGG CCGCAACTCA
AACTTGGATT TTGATGAAAC CTATTGGGCA ATGTCTTTGA TTACCACATG GCGTAATATG AATCATATGA CACATTTTGA
ACCCAAAAGA TTAATTGATT TTGAGGCCAA GCTAATGATA AGTGAAGTCA ACGATATATA TGTGGAAACT CTTGTAGTAA
TTGCAACGCT GTACGTAATA CTACCGCGAT TTTCGTGATA TTAAAGTATA TTTCTCAAGC AATGCTTCAG AACATTATCA
TTTGAATTAT GTTGCACCTG AATACTATAT CTTTCATAAA TATTAGTTAT TTCTGCAACC GGTGTATAAA TCTGAAAGTT
AAGGACTGAT ACATGAACAT GATTTAGGTT TATGTCATTG GAGAAGATGG CATCTTGAAA GAGCTTGAGC TTGCTGGATA
TCAGTACCTT GGTGGGCCGG TATGTACTAT TGAGTTCCAT ATGCAACATA TTTACCGTCT GTCTTTTTAA TACTTAAAAA
TCTGATCAAT AGGTCACTGT GCAATATCAT TTGTTTGTTT ATTTGTTTCT TTTTTTCTTC CAAAATCAGG TTGATAGATA
ACAACACATA AATTAGATTT GAATGTTAAT GAATGGGATA TAATAATCTC AACTTCTAGT GTAGAAGAAG GGCGCAGAAA
GTCAAACAAA ACTAGTAGGT GACGTACATG GTACTTTTAT GTCTTTCTAA GGGAAAAGGA GAAGCTAATA AAAAGTGTAA
AAAGTAGTTA TGCATAATAT TAGTATGGAA TTATCCTTAT GTCTGATTTC TCTATCCCAC TTTTATATGC ATGTTCTTCA
TTTAGGAAGA TGGCGGGAAA AAGATAGAAC TGAAGCCAGG TTTTTTGATG GAGCACGATG AAAATGTATG TGCTTCCTGC
CTTTATTGAA AATTTTAAGA TTTTTATTTG ATATTATTTG TAGTTCGTGT AAAAAAATGT GAATATTTAT TAGGTTGGAG
CAGTTGTTGT TGGGTTTGAT CGCTACTTCA ACTACTATAA AATCCAGTAA GATTTCAAAG CTGTCACCGA AACATTAAGG
ACACTTTTAT GCACTAGAGT TAGACAGATA GCATGCAATG GTTCTATTTT TATTTTCCTG TTTTCTTTAT AAAATGTTGC
TGTCATTGAG TTCCAAGCGT AAGAGATATC TTATTCCTTC AAATCTGTAC ATGTTAATGC AGAAGAGGAT TTATTTTTTC
TTTGGTTAGC AAAATCTGAG TTTTATGAGC CTGAAATGTT TTCTTAAAGC AGTCGATGTT GCATATATTT TTAATATGCA
ATAATGTTTG TCTTGCACTA TTTTATGGGG TTGTGAGATG GGCTGAAGGA AGAGAGAAAA AGAATGGAAA GGAAAAAAAG
GAAGAAAAGC AAATGTGATA GATTATGTGA TGGAAAAGGA AATGATAGGT AGAAATAATA GAGAAAGGGG TGTGAGAAAA
TAATATCCTT TAGCATGAGC ATGATAATGA CGGCAATCCT ATTTCAAAAG TCACGCTGAG GTAGATAGAA ACTCTGGATT
TGTTATTATT GAATATTACT TTTTCCTTCG TGATGAAAGG TATGGAACAC TCTGCATACG TGAAAACCCT GGATGCCTTT
TCATTGCTAC AAATCGTGAT GCTGTTACTC ATCTCACAGA TGCTCAAGAA TGGGCCGGTT TGTCCTTCTT TCTTCTCTCC
TTATTGATTT TATTTATTAC TTTGTGCATG ATAATCTCAG GACTCGTTTG ATTTTTCTTT ATTATGTCAC ACTTACAGAA
TTAGAGCAGA TTACATAAGA AAACAGCAAA ATAAGTGTTT CAAAACAGGG TCACAAACTA GAAACAGTTC AAAGTATCAA
CATGGGAAAT ATGATTATGC ACTTGTTACT ATCCCTATAG TTAGTAATTC TTGAAATGGT ATTAGAATAA TTTGTACTTG
CATTTCAGGT GGGGGCTCAA TGGTTGGCGC CATCAGTGGA TCTACTCAAC GTGAGCCGAT AGTCGTTGGA AAACCCTCAA
CGTTTATGAT GGATTACTTA GCAAACGAGT AAAAAGCTTT CTGTTACCAT ATTTTTTATT TTCAGTGCAT GATAGATAAG
TTATCCGTGA CATAAATAAT CTGCTTGAGT GAATGGTATT GTGTCGCTTA ATGTTTTTAT GCGTGGTCTT CCTATATCAC
AAGATATTTT AAATCTTGAC ACAAGTCTTA TCTTTTTACA CATCTTTGCA CCAAATCATT ACTTCTTCAT ATTTCCCATC
TGTTGTTGCT GCAATGGATC ATTTTCCCAG CCTTTTAGAG TAACGTGATC ATTAAAAAGA ATATACTTTT GTAATTTTGA
AGAAAAAGAG AGAAAGAAGA ATTAGTGGAA GCGGTCGTAT AAATTTGTTG AGCTGTTGAG ATATTATTGT CCAAATTTTT
GCCGGGATCG CAGATTATTA AACTGTTCTA TTTATTCCTC ACAGATTTTT AACCATAAAT GTGTTTATGT CTGATGTTTT
TCAATGGGAA ATGGGGGAAT GAGAAAGGAC AGTCCACTGA TGCCCCCATA GGGATGAGAA AGTTTAGAGA CTTCATCGCT
ATTTTTAGTA AACCACTATT CTCTCTAGAA AGTTTAGGGC AATGGATAGT AAACTGTAAA TAACTTTTCT CTCTAGAATT
TCCCTTAACT ATTGTAATTT CATTGAACAG ATTTGGCATT TCGAAGTCAC AGATATGCAT GGTTGGGGAC AGATTAGACA
CTGATATCTT ATTTGGGCAA AATGGTGGTT GCAAAACTCT TCTTGTGCTC TCCGGAGTCA CCACGCTGCC CATGCTCCAG
AGTCCTAACA ACGCCATACA ACCAGACTTT TACACCAACA AAATTTCAGA TTTTCTTAGC CTTAACGCTG CAGCTGTATG
ACCATACAGT TTGCATTTAT AATTTAATTT ATAAATGTAT CATCCCCCAA TTGAAGGTGG GGAAGGAAAA TCGTGTATTT
TATTTAAGTA AATAATTAGA AAATGTTCCT TTATTTTTCC ACTAAAGAGA ATTGTGTACA AGATTATGAA ATGGTTATCT
GTCAATATAA ATCTTAATTA TGCAA

>Vigan.04G065600.01
ATAAGATCCA CAAAAAATTC AGGTTGGGCT GGAGATTATG ATCCAAAAGC GCACGAACTT GGTCCACTCA AAACCTATGG
CTTATGTTCG ATCTCTCAAC CATTTCACCT TCGTATCACA TGCTGCACCC ATGCACACAC CACACAAATA ATAACCCAAA
AAAAAAAAAA CAAAAAACAG CAATTCTGAA GGAAATGCTC AGAAGCAGCA CTTTAACACA GAGTGTTACA GTCACCTGTG
TTCGTCACAG TCACAGACAA TGGCACCAAT CAATTCCTGT GAACTATAGA GTCTGTGACG CTTCTCGTAA CACTCTGTCA
TCGAACTCCG CGATCTTCAA GTGGAAGAGA AAATCGAATA CTAAACGTAA CAGCTCTGGA ATGGGAACCT TCACCACGCG
CGCGTTGGCG CAGCCGCTGA GGAACGCCGA TGAGCTCATC GATTCCGTCG AGACGTTTAT CTTCGACTGT GACGGAGTTA
TATGGAAAGG GGACAAATTA ATAGGAGGAG TGCCCGAAAC ACTTGACATG CTCCGGTCAA AGGGAAAAAG ATTAGTTTTT
GTCACCAACA ACTCAACCAA GTCTAGGAAG CAGTATGGAA AGAAGTTTGA ATCCCTTGGC CTGAATGTCA GCGAGGAGGA
GATTTTTGCG TCATCCTTTG CTGCTGCTGC ATATCTGAAG TCCATTGATT TCCCAAAAGA TAAAAAGGTT TATGTCATTG
GAGAAGATGG CATCTTGAAA GAGCTTGAGC TTGCTGGATA TCAGTACCTT GGTGGGCCGG AAGATGGCGG GAAAAAGATA
GAACTGAAGC CAGGTTTTTT GATGGAGCAC GATGAAAATG TTGGAGCAGT TGTTGTTGGG TTTGATCGCT ACTTCAACTA
CTATAAAATC CAGTATGGAA CACTCTGCAT ACGTGAAAAC CCTGGATGCC TTTTCATTGC TACAAATCGT GATGCTGTTA
CTCATCTCAC AGATGCTCAA GAATGGGCCG GTGGGGGCTC AATGGTTGGC GCCATCAGTG GATCTACTCA ACGTGAGCCG
ATAGTCGTTG GAAAACCCTC AACGTTTATG ATGGATTACT TAGCAAACGA ATTTGGCATT TCGAAGTCAC AGATATGCAT
GGTTGGGGAC AGATTAGACA CTGATATCTT ATTTGGGCAA AATGGTGGTT GCAAAACTCT TCTTGTGCTC TCCGGAGTCA
CCACGCTGCC CATGCTCCAG AGTCCTAACA ACGCCATACA ACCAGACTTT TACACCAACA AAATTTCAGA TTTTCTTAGC
CTTAACGCTG CAGCTGTATG ACCATACAGT TTGCATTTAT AATTTAATTT ATAAATGTAT CATCCCCCAA TTGAAGGTGG
GGAAGGAAAA TCGTGTATTT TATTTAAGTA AATAATTAGA AAATGTTCCT TTATTTTTCC ACTAAAGAGA ATTGTGTACA
AGATTATGAA ATGGTTATCT GTCAATATAA ATCTTAATTA TGCAA

>Vigan.04G065600.01
ATGTTCGATC TCTCAACCAT TTCACCTTCG TATCACATGC TGCACCCATG CACACACCAC ACAAATAATA ACCCAAAAAA
AAAAAAACAA AAAACAGCAA TTCTGAAGGA AATGCTCAGA AGCAGCACTT TAACACAGAG TGTTACAGTC ACCTGTGTTC
GTCACAGTCA CAGACAATGG CACCAATCAA TTCCTGTGAA CTATAGAGTC TGTGACGCTT CTCGTAACAC TCTGTCATCG
AACTCCGCGA TCTTCAAGTG GAAGAGAAAA TCGAATACTA AACGTAACAG CTCTGGAATG GGAACCTTCA CCACGCGCGC
GTTGGCGCAG CCGCTGAGGA ACGCCGATGA GCTCATCGAT TCCGTCGAGA CGTTTATCTT CGACTGTGAC GGAGTTATAT
GGAAAGGGGA CAAATTAATA GGAGGAGTGC CCGAAACACT TGACATGCTC CGGTCAAAGG GAAAAAGATT AGTTTTTGTC
ACCAACAACT CAACCAAGTC TAGGAAGCAG TATGGAAAGA AGTTTGAATC CCTTGGCCTG AATGTCAGCG AGGAGGAGAT
TTTTGCGTCA TCCTTTGCTG CTGCTGCATA TCTGAAGTCC ATTGATTTCC CAAAAGATAA AAAGGTTTAT GTCATTGGAG
AAGATGGCAT CTTGAAAGAG CTTGAGCTTG CTGGATATCA GTACCTTGGT GGGCCGGAAG ATGGCGGGAA AAAGATAGAA
CTGAAGCCAG GTTTTTTGAT GGAGCACGAT GAAAATGTTG GAGCAGTTGT TGTTGGGTTT GATCGCTACT TCAACTACTA
TAAAATCCAG TATGGAACAC TCTGCATACG TGAAAACCCT GGATGCCTTT TCATTGCTAC AAATCGTGAT GCTGTTACTC
ATCTCACAGA TGCTCAAGAA TGGGCCGGTG GGGGCTCAAT GGTTGGCGCC ATCAGTGGAT CTACTCAACG TGAGCCGATA
GTCGTTGGAA AACCCTCAAC GTTTATGATG GATTACTTAG CAAACGAATT TGGCATTTCG AAGTCACAGA TATGCATGGT
TGGGGACAGA TTAGACACTG ATATCTTATT TGGGCAAAAT GGTGGTTGCA AAACTCTTCT TGTGCTCTCC GGAGTCACCA
CGCTGCCCAT GCTCCAGAGT CCTAACAACG CCATACAACC AGACTTTTAC ACCAACAAAA TTTCAGATTT TCTTAGCCTT
AACGCTGCAG CTGTATGA

>Vigan.04G065600.01
MFDLSTISPS YHMLHPCTHH TNNNPKKKKQ KTAILKEMLR SSTLTQSVTV TCVRHSHRQW HQSIPVNYRV CDASRNTLSS
NSAIFKWKRK SNTKRNSSGM GTFTTRALAQ PLRNADELID SVETFIFDCD GVIWKGDKLI GGVPETLDML RSKGKRLVFV
TNNSTKSRKQ YGKKFESLGL NVSEEEIFAS SFAAAAYLKS IDFPKDKKVY VIGEDGILKE LELAGYQYLG GPEDGGKKIE
LKPGFLMEHD ENVGAVVVGF DRYFNYYKIQ YGTLCIRENP GCLFIATNRD AVTHLTDAQE WAGGGSMVGA ISGSTQREPI
VVGKPSTFMM DYLANEFGIS KSQICMVGDR LDTDILFGQN GGCKTLLVLS GVTTLPMLQS PNNAIQPDFY TNKISDFLSL
NAAAV*