GBrowse Details

Vigan.04G064900.01

Basic Information:
Name: Vigan.04G064900.01
Multiple alignment
Variant Information
Position: Chr04:6144043..6148581 (- strand)
Length: 4539
Functional Information:
Description: Similar to Acyl carrier protein. [V7B2C0, Phaseolus vulgaris]
GO: Biological Process: fatty acid biosynthetic process (GO:0006633)
InterPro: Acyl carrier protein (ACP) (IPR003231)
Acyl carrier protein-like (IPR009081)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:41.47,48.57,77.86,37.97,99.90,171.84,101.35,59.98
Arabidopsis thaliana homolog: AT2G44620.1
Automatic updates:
Name: NM_001248115 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative acyl carrier protein, mitochondrial (LOC100306438), mRNA; nuclear gene for mitochondrial product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr04:6144043..6144325 (- strand)
Length: 283
Type: three_prime_UTR
Position: Chr04:6144326..6144502 (- strand)
Length: 177
Type: CDS
Position: Chr04:6148361..6148534 (- strand)
Length: 174
Type: CDS
Position: Chr04:6148535..6148581 (- strand)
Length: 47
Type: five_prime_UTR

>Vigan.04G064900.01 class=Sequence position=Chr04:6144043..6148581 (- strand)
AGTCACTTCA CTTGTTGGTA AAAGAAAGGA GAGAGAGAGA GAGAGAAATG GCAGTGAGGG CCGCCGTACT CCGCCACATT
CGTGTGCCAC TCCAAGCCGT TCCAAGACTT CAGCCATGGC GTGCCATGTC ATCACACGGC GACGACCATC TCTCCAAAGA
GGAGGTCATC CAAAGAGTCC TCGCCGTCGT CAAAGATTTC CCCAAAGTCG ATCCTTCCAA GGTTTCCCTC TTCCTTTTCC
TTCCCTACTT TCATTTCTTC CATCCTTTTC TGTATTCTTA TTGTCAAATA AGAAATATGA GAAAATGGTA CTCTGAATTG
TGATCTGCTG ATTTCACCAA ATGGGTTGTC CGATTGTTTG GGAAACGGGG AATGAATGTC GCTGGCCTTT TTTATATTTT
GGCAAAAGGG TTTTCCCACA CTTGGAAATT TAGCTCAATT GGAATCTGGG TGGTGTTTGG GTTCTTAATT GCCTTCAAAA
ATTGTCAGTG GGAATTCTGA TTGATTTAGC TATAAGGGTC TTTCATCTTC CTGAAATATG ACATTTTTTT ACCTGTAACT
ATCCGGGTGG TGTTTACATT CTGTTGCCTT GGTTAATTCG AAAATGAAAA ATTGTCATTC CGTTGATTTA ACCAATTGAT
GTTCCCCGAA TTTAGCTCAG TTATAAATAA CCTGGGTTGT GATTGTAATC TTATTTAGTG TGAAATTGAG GATTAGATAT
TCCAAATCAT TATTCTGTTT ATTGAGCTCA CAAAGTCTAT TCAACATTTG AAAGTTTGCC GTAACCACCT GACTTGTTTT
TGTGCTTTGT TGTGTTATGT GAGACTGTGT ATAGTGATCC GTTTATTTTG CTATATGGAT TTTCCCATAG TCTGGAAATT
TAGTTCAGTA ATCATACGGT TACTTTTGGT AATCTTAATT TTGGGAAAAG TGCAAGTCAC AAATCACTAT TTTATTGATT
TTCCCGAAAA GGTTCTTCCC AAAGTTTAGG GAATTCTCAA TAAGATAAAA AAAGTTCAGG GAAGAACCCT AACAGAGAGT
TTCTCTCACC TTAAATTATA ACTAGACATT TTGTCTATTC CATTCATTTC CAAATTATTT ATACCTCTTT TACAGAAGAA
AAAACAACCT AACTAAGTTT CTAAATCTTT TGTTCGGAGC AACAATTAGG CATTCTATTC TCATTCTAAG CAAAAAGTAC
ATGTGAGTAG CACCTCCCTC ATGTGGTTCT CCACTTGTTT GGTTCCATCA TGTAATGGCA CCTTCATTAG ATTAGTCATC
ATCTTTTGCA AACTTTCGTG GACCAATTTA TAGTTCTTCG CGCTGATCAT GGTCCCTCCT AAACTTGTAT TGGGTCTTGG
GCTTCCATCT GGTTATGGGT CTGAGCTTCA TGGGAATTAA GAGCTTTAGC CTGATCAATG ATGTCCACAT CACTAGTGGG
GAATTTTTCA AATATTTAAT GAGGGAATTT AGGTAAAAGA GCAAATTCTG TTATTGTTTT TAGCTGTTCA TTCTTCTGAG
AGTGATGTTT TTATCAAAAA AACTATGGGG GACTAGGGCA TGGTGTGACT CAAACTTTCT TCTATAGTGT ATTTGATTAT
GATTTCTGTC AATATCTTCC TAAATTGGTG GCCTGGTCCA CAGGACTCAT ATCACTAAGT GGAGGAAGGG TTGGATGGGG
GGAATTGTTC TCTATGTGTT GTGTGTCAGA CCTTACCTAG TATGATATTT GGCTTCTATG TTATTTTTTT TATCAAAATA
TTGATTCAGA TAACAAGATT CTTTTAATGA AGCATAATTT CTGATAACAA GATTCAGGTA ACAAGATTCT GACAATTTCA
GTAATATTTT TAGAGTTTGC ATTTTTTATT GTTTATAGCA CACATTCCGG AGCAAAAGGT GAAAAATAAA ATGGTAAAGG
CTTTCATTTT TATGAAGGCA TTTAGAGTTT GACGTGCCAA GGCGTGATGG ATTGGAGTTT GGAAGACTGT CCCCTTGCTT
TGAAGCATTT TTTTTCTTTC TGTTTTTCCC TTTTTTTATT CTGTCTTGTT TTTATCCAAA TTCTAGGTAA CTCTCTCCCC
CTTAATAGAG TTAAAAATAA TAGTGATAGA CAAAGCAAAT TATGAAATTA TAATTCAGTC TAATGATCGG AATGATGCAT
GCATGTTTAT ATAAATAATA TTCCCTGTTG ATTTTCTTTT CAGTGATTAA GACTCTTCAC CCTTTACTTG CTTTGTGTGT
ATGGGGGAGG GCTAGGCGGC TGGTTAAGTT TTCCTCAAAT CCACTTGGTG GGAGATGAGA GAGAGATGAA GATAGGGTGT
AACTAGATAT GAACTGTGTA ATACACTTTT GATTCACTTC AATGAATTCT TAAGTAAATG CCCAATTTCA TATAAGTAGT
GTATTTTGGA GTTATCGGAC TATGGGTGTG GTTTGGTGGG TAGTAATGGT AGATATTTAT GAGCTAGGGT CTCAGATAAT
TTCTGTTTTT GTAGGTAGTG GTGGTGGAGG AAGAATAGCG TGGGCTTATT TTGAGATGGT GTATTGGAAG TGTGAGGTTT
TGTTTGGATC GGAGGTTATT GGCTACATTG GTTGATGGAG ATAAAGTTTA TGGCTTTAGA TTTCATTTGG TGGCTATTGT
TGGTTCATCC ACTATGTCTG ATTTTTGCTA ACGTGGAAGG ATTATATAGA ATGAAACTTT TATCTGTAAT TGATTTAGGC
TTCTTTGGGA TTTTGCTTGC TTCCTTGTTT TTCACTAATA TGGAGTGGTT GTATGGAATT AAATTATGAA TTTTATATTT
TGGGAGTTAG AAGGACTTAA GTTGACCCTC CTTACATGGT TTGGCCCTAA CTCACATGGG CTGAGGCTAG AAAAACTTAC
AAGGTCAAAA AGCTTCCCAT TGAAAAAGCC TACGGGATCA AAATATTTAC AAAAGTCCTG TGCATCAGAG CCCGTCCATG
TGTCTTCTAT TTAGAAAAAA TATTCATTTT GAATACAAGA AAAAAATGCA ATTCCTAATT TGTTGCAAAT TTAAGTGTTT
TTAATTTGTC AAAGAACTGT ATACAAACAT TTTAATTAGA CTAACATAAA TTTTGTGAGA AGTTTTAATA AACTTGGTTG
TGTGCTTTTA TAGGAAAATT ATGCATAAAC CATAAATGAT ATCGTTTCTA AGAGTTAATT AAAGTCTTGT AGTAGGGTTA
AACCCACCCT AACCTTGACC CTAGCCCACT TGAGAGGGAG TTTTGGGGGT TGAGGCATTT TTTTGGCTCT TGCTTGAAGA
GGCCTCCTAA AAGGGGTTTT TTCAAGGGTG GACTAGGACT GACTCATGGG CATGCGTCAA GTTGATAACT CTTCATACCT
TTGACTTAAA TGCAAGATAG AAAAAATTTC AGGGACTCAT TTGCATGAAA TAAATTTCAG CAACTTATGT ATTAATGTCT
CAATTTTTTA GGATCAGATT AAGTATTTCC TCAATTTTTT TCCTGATTCC TGCATTCAGT TTTCAGCTCT AGGGGAAGAC
ATTGCATGAG AAATATGTAA AACTGGAAAT GGTTGTGGTC TTTATTTCCC GTTTCTCGTA GACTTTTATC TATTAACTTT
TATTCCAATT TTTTTGGTTC CTTGGGGGTT ACCATCAATA TAACAAATGC ATAGTTATGG TTAAATATCT CTTGGTTCTT
TTTGTACTCA CTCTTTTAGA TAAAATCTGG GTGGAAGCAA CTACACTTTT GCTCAGTCAG CCCACTCTTG AAATATACAC
TATTAGTTGA TCTCAAGCCC TTAGATTACT TCATCTTGAA TTTGTTAAGT GGACTTTAAA CCGAACTTAA TTCTACAAAA
TTAGTTTGGA GAAGGTTGCA TCCATTTATA TATTATAAAC TCGTCTTATT CCTAATCGAT GTGGGATTTC TAACAGTATT
TATCACTTGC ACTTTGTAAC AAAGCTGCTA AAATTTTCTT TAATTTGATT GCACCGAGTG TTATTCCGTT TTGCAATTTT
GGTGATGCAC ATCTGGTTAA AACTGTGAGC AATTGCTAAT GAAATGTTCT TGTGTGTATT GGTTTCTTCT GCTCCTCAGG
TGACTCCAGA TGTCCATTTT CAGAAGGATC TGGGTTTGGA TAGCTTGGAC AATGTGGAAA TTGTAATGGC TCTGGAAGAG
GAGTTCAAGT TAGAGATCCC AGACAAGGAA GCCGATAAAA TTGACTCCTG TAATCTTGCT ATTGAGTATA TTGCTAATCA
TCCCATGGCT GGTTAACTAA TATGACCTTT TTTCCTATTT GTCTTCTTGT TGAACTTTTG AGTATCAGTG CAACCTTGAA
CCCTTTCCTT ACTTTCACTG GATGTTTATG GAATCTGGTG TTTGTCATCT TTTCCTTTTT CTCTTTTGAA TTGGAGTGAA
GGAACTGGTT GTTTAGAATA ATGTGAATTG TTCAGAGAGG AATTTGTCAA TGAAAATTGG TACTGGTTTT TTGAAGGACT
ACAATTTCTA CTGTAAACTT TTTTTAGCCA TGCTAAATCT CTGATATTAT TCACTGAGA

>Vigan.04G064900.01
AGTCACTTCA CTTGTTGGTA AAAGAAAGGA GAGAGAGAGA GAGAGAAATG GCAGTGAGGG CCGCCGTACT CCGCCACATT
CGTGTGCCAC TCCAAGCCGT TCCAAGACTT CAGCCATGGC GTGCCATGTC ATCACACGGC GACGACCATC TCTCCAAAGA
GGAGGTCATC CAAAGAGTCC TCGCCGTCGT CAAAGATTTC CCCAAAGTCG ATCCTTCCAA GGTGACTCCA GATGTCCATT
TTCAGAAGGA TCTGGGTTTG GATAGCTTGG ACAATGTGGA AATTGTAATG GCTCTGGAAG AGGAGTTCAA GTTAGAGATC
CCAGACAAGG AAGCCGATAA AATTGACTCC TGTAATCTTG CTATTGAGTA TATTGCTAAT CATCCCATGG CTGGTTAACT
AATATGACCT TTTTTCCTAT TTGTCTTCTT GTTGAACTTT TGAGTATCAG TGCAACCTTG AACCCTTTCC TTACTTTCAC
TGGATGTTTA TGGAATCTGG TGTTTGTCAT CTTTTCCTTT TTCTCTTTTG AATTGGAGTG AAGGAACTGG TTGTTTAGAA
TAATGTGAAT TGTTCAGAGA GGAATTTGTC AATGAAAATT GGTACTGGTT TTTTGAAGGA CTACAATTTC TACTGTAAAC
TTTTTTTAGC CATGCTAAAT CTCTGATATT ATTCACTGAG A

>Vigan.04G064900.01
ATGGCAGTGA GGGCCGCCGT ACTCCGCCAC ATTCGTGTGC CACTCCAAGC CGTTCCAAGA CTTCAGCCAT GGCGTGCCAT
GTCATCACAC GGCGACGACC ATCTCTCCAA AGAGGAGGTC ATCCAAAGAG TCCTCGCCGT CGTCAAAGAT TTCCCCAAAG
TCGATCCTTC CAAGGTGACT CCAGATGTCC ATTTTCAGAA GGATCTGGGT TTGGATAGCT TGGACAATGT GGAAATTGTA
ATGGCTCTGG AAGAGGAGTT CAAGTTAGAG ATCCCAGACA AGGAAGCCGA TAAAATTGAC TCCTGTAATC TTGCTATTGA
GTATATTGCT AATCATCCCA TGGCTGGTTA A

>Vigan.04G064900.01
MAVRAAVLRH IRVPLQAVPR LQPWRAMSSH GDDHLSKEEV IQRVLAVVKD FPKVDPSKVT PDVHFQKDLG LDSLDNVEIV
MALEEEFKLE IPDKEADKID SCNLAIEYIA NHPMAG*