GBrowse Details

Vigan.04G017700.01

Basic Information:
Name: Vigan.04G017700.01
Multiple alignment
Variant Information
Position: Chr04:1524299..1528153 (- strand)
Length: 3855
Functional Information:
Description: Similar to BZIP transcription factor bZIP69. [Q0GPF3, Glycine max]
GO: Biological Process: regulation of transcription, DNA-dependent (GO:0006355)
Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700)
Molecular Function: sequence-specific DNA binding (GO:0043565)
InterPro: Basic-leucine zipper domain (IPR004827)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.15,4.26,41.56,0.06,0.00,0.07,11.23
Arabidopsis thaliana homolog: AT3G17609.2
Automatic updates:
Name: NM_001250277 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max bZIP transcription factor bZIP69 (BZIP69), mRNA.
PubMed ID: 18365246 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr04:1524299..1524591 (- strand)
Length: 293
Type: three_prime_UTR
Position: Chr04:1524592..1524663 (- strand)
Length: 72
Type: CDS
Position: Chr04:1525048..1525204 (- strand)
Length: 157
Type: CDS
Position: Chr04:1526826..1527009 (- strand)
Length: 184
Type: CDS
Position: Chr04:1527816..1527975 (- strand)
Length: 160
Type: CDS
Position: Chr04:1527976..1528153 (- strand)
Length: 178
Type: five_prime_UTR

>Vigan.04G017700.01 class=Sequence position=Chr04:1524299..1528153 (- strand)
CAAACTTTCT GGTCCCATCC CTTGTATGTT TCATCGTCAA TGGTTTAGGA TGAGATGGTT CCATCCAACA CTTAAAACAC
ATGGTCCCAT CTTTCACACT AACTAGGACT ACACACAAAC ACTTTTTCCC TTTGAGAAGA AAAAATAGCT ACAGCCTTCA
TAGCAAAGAG AGAAAAAGAT GGCTCTTCCA AGACCAAGCA GTGAAGAGAA AGCCCTTTCT CAGCTCAAAG AAGGAACAGC
ATCATCATCA GCAGCAGCAC CACCTTCATC ATCTTCTTCA TGGAATAGGC TTCACACTTT CTCTCCTTTG AATCTACACA
ACAAGACTAG CAAAATTGGT AGGTTTAACA TTCTTCTTTC TTTCTCATAC AAAACATATA TTCTTTTTCT CATTTACACA
TATTTCTACA AAACTACTGT AAGAGAGAAA ACAAATTATT TATAAAATTA AACTTTGTTG GTGTATAAAT TGAGGTATGT
GTAAACTAGT GTTTGATTAC CGGAGGAGGT TATTGATATC ATTATTGGAA AGCAAATAAT TAAAAAATTT CTGTTTTTTG
TATGATACTT TTTGTAGGTA TTTGTTTGTG AGATGAATCT CAAGTTATAC ACAATGAAAA TTAAAATTCT TGAAGGAATG
CATATAAATT TTAAGGTTAA ATATTTTTTT CTTCTAAATT ATTTTAAAAT ATTATAGTTT TGGTCTTTGA ATTAAATAAT
ACTTTTTTTA TACTTTATGA AAGATGTATA AAACATTATT TTTAACAAAT AATGTAAAGT GTTTTCATAT GACAGGAAAT
TTCGGAATAA ATTTTTATAT GACTTTATAA AATTTAGAGA TGAAATAGTT TTTAAATTAG TTTAAAAATA AAAGATAATT
TTATGATAAT TTGATATAAA GAAAAACATT TAATCTTAAA TTTTATCTTT CTTCCAAATT ACATTATAAA AACACTACCT
CTTTGTTTCC TTTTTTTTAT TTCGTTTTTT CTTATATTTA CTTTGTTTTT CTTACAAAAG ATTAATATAA AGAAAGAATG
TTTGAATTAT TAGAATTTTG CGTGATAAAG GAAAGAAATT TTGAAATTTT GATGCACATA AATAGAACAT GGTGACCTAA
TTTTTGGAGT ATTGACTGAT CCAGAAGACA GTGATGAAGA TATGTTCACA GTTCCAGATG TCGAGACCAC ACCCATTAAT
GTTCATTCTC ATCCAAACAG TAACCTTAAA CAATCTAACG TGACAGAACC TCAGTTTCAA ACTGGTTTCC CTGGAAAGCG
TCGCAGGGGA AGAAACCCTG CAGATAAGGA ACATAGACGT CTCAAGAGGT ATACATACAC ATATTACAGT AGATTATTAG
AATAAAGAAA AAAATATATT ATAACACACA TAAATTTTTT ATATCCATTT TAATACTTTT TATTTTTTAA TTTTTTAAAA
AAAGAAATAC AAAAATTTAT TAATTTATTT ATGATTATTT TACTTTTATA TTATATATCA AATGATATAA ATTATTTCTA
TTTAACATTC AACTTTAATA CTTATATAAC CAAATTATGA TATATAAATA ATATAAATTA ATTAAAAATC TTATTTTATA
TATCAGTTTG GTAAAATTTA ATCATATATA TAAATTTACT TACTATCATA ATATCATGAC GTCCATTATT ATATCTTTAT
TATTAATTTA TTTACAAAAA TTTAAAGTCA CTCATGCTCA CAAATTTTAC TTTATACTCG TAGTGGTTAT AACTCAATTT
AGAAACACTT TTAATTTGAA AAATAATAAT TTTCTATAAT ATTATATATG ATTAAAAAAA AAATTTTAAG TAGTTAATTG
CAAATGTCTT ATGCATTTTT TTTTTCCTTT ACATAGAAGT TGATTTTCTT TTTCTAAAGG GTGTTTAGGA ATGCCCTTAT
TCAAATGTAT AACAGAAAGA AGAATATAAA ATGTTTTCTA ATGACTTTAA AAGGTTTAAT CTTCTTCTAC TAATTAGTAT
TGAAATTGTG GGAATCAATT ATGATGGGTT TTCTTGTAAT GGGTGATAAA TGGAAGAAAC TATTTTTATT ATAGTTGAAG
AATAAGCCAT TCAAAAGATT GTATGTTACC TATAGAAAAA AGAAAATACA AGGAACAAAA ATTATTGTGT AAATATAATA
AGATAGTAGT CGTTTAATGC TATTAATTAA CACCGTTTTT AAAAAATCAA AGTAAAAAAA TATTAAAACA ACACCTTTTA
GATTTTCGTA TGGTTTAGAA TTTGTTTTGG TACAAATTAG TAGAGTTTTT GAAAGTTTTT CTATTAAAAT ATAGCCTTCG
GTTAAATAAC TTTTTATTCC TAACAGAAAT TATGTATTTG GTATATGATG CTTTAATGAT TTTTTTTTTA ATTTTGGTGA
TTAATAAATT TTTTATTTTT ATTTTAACTT TTACTATTGA GTGACATTAG TATGTGACAA CTTGTTCATT AAGTAATATA
TTAATTACTT AGTATGATAC ACTTTTTTGT GTGTGTGTGT GTTATTTTTG TTTTCAATTT TCAATATTTT TTGTCTTATT
TTGATCTTAA AAAGTTATAC TTTTGCTATG GTCTTTCTTA CATGTTAAGT GATGATGGAT TGTGTATTAA GTAATTGTGA
CTGAGAAGAA TTAATTCATG TATTTTCTTA ATTATTTTTA AAAGAAAAAA AGTAATCAAT TTGAACGAAA CTTTGTTTTT
TTCCATAATA TTAAATATTT ATAATATTTT ATTTTTTATT TTTTTAAATT TACTTAATAA CTAAATATAT TTACAGAAAA
GACATCTCTA AAACTAAATT TTTTGTAAAA AAGATAATTT AAATAAAAAA ATGAAGATTT TTTTTTCTAA AAGCTAATTT
AAACAAAAAA TATTAATTAT AAATTCATCA CAATCTATAT TACCTTTGAT ATTATATGTT TTCAAATAGG TTGTTGAGAA
ATAGAGTTTC TGCTCAACAA GCTCGAGAAA GAAAGAAGGT TTATGTGAAT GATTTGGAAG CAAGAGCCAA AGAGTTGCAA
GATAAAAATG CTATCTTAGA AGAACGTATC TCTACTTTGA TAAATGAGAA CACCATGCTT AGAAAGGTAA CATTTTTTGA
AGTATTAGTT TTACTCTTTT CCATTTGTTT CTAAATATAA ATGTTAGAAA TTTAAGTAAG ATTAAGTCTC ACATTGAATA
CAAATGAGAA AGTAGAATAT TATATAAAGG TGAAAGACCC ATTGATACAT TATCTTAAGA TTTTGAGTAA AAAATGATGT
CAATCTTTTA TATGTTTGGA CTCAGATCTC ATTGGTATAT GTATCTCTCT AGTAAACTTC TTCCTCGATA GACCTAAGAA
TAAAACATTT CATTACAAAT TTTTTTATAA GTTTTATGTG AATCCTAAGT ATTGCATTTT AATTTTCATG TACTAGTGTT
TGTCAATTAA TGATATAGAT TGAAGTGTGT GTATTAATCA TGATTCACAG GTTCTTATGA ATGCCAGGCC AAAAGTTGAT
GATAGTAATG AACAAAAGCA AGAGCACTTA AGTAAGAGCT AACAAGGTTA AACCTTCAAA AAAATTATTT ATAATTTATT
CTATAATGTA AATTTACAAA TTTATGACTA TTTTCTTTCT TTTATACTTT TATCTAAGAC GTTCTCCACC TCCACATCAA
GGTTTTTTGT TCGGCATTCT TTGATGTAGT GAAGTTGGAA AAAATTTAAA ATTAATGCTT ATTGTATAGT AGTTTCAATG
TATCTTAAGA AAATATTTAG TCCGTGCAGA TTGAATTTAA AATTTATTAG ATTTTATGAT ACTCTAATGA GATATATTGT
CATATTCTAG AGTTA

>Vigan.04G017700.01
CAAACTTTCT GGTCCCATCC CTTGTATGTT TCATCGTCAA TGGTTTAGGA TGAGATGGTT CCATCCAACA CTTAAAACAC
ATGGTCCCAT CTTTCACACT AACTAGGACT ACACACAAAC ACTTTTTCCC TTTGAGAAGA AAAAATAGCT ACAGCCTTCA
TAGCAAAGAG AGAAAAAGAT GGCTCTTCCA AGACCAAGCA GTGAAGAGAA AGCCCTTTCT CAGCTCAAAG AAGGAACAGC
ATCATCATCA GCAGCAGCAC CACCTTCATC ATCTTCTTCA TGGAATAGGC TTCACACTTT CTCTCCTTTG AATCTACACA
ACAAGACTAG CAAAATTGAA GACAGTGATG AAGATATGTT CACAGTTCCA GATGTCGAGA CCACACCCAT TAATGTTCAT
TCTCATCCAA ACAGTAACCT TAAACAATCT AACGTGACAG AACCTCAGTT TCAAACTGGT TTCCCTGGAA AGCGTCGCAG
GGGAAGAAAC CCTGCAGATA AGGAACATAG ACGTCTCAAG AGGTTGTTGA GAAATAGAGT TTCTGCTCAA CAAGCTCGAG
AAAGAAAGAA GGTTTATGTG AATGATTTGG AAGCAAGAGC CAAAGAGTTG CAAGATAAAA ATGCTATCTT AGAAGAACGT
ATCTCTACTT TGATAAATGA GAACACCATG CTTAGAAAGG TTCTTATGAA TGCCAGGCCA AAAGTTGATG ATAGTAATGA
ACAAAAGCAA GAGCACTTAA GTAAGAGCTA ACAAGGTTAA ACCTTCAAAA AAATTATTTA TAATTTATTC TATAATGTAA
ATTTACAAAT TTATGACTAT TTTCTTTCTT TTATACTTTT ATCTAAGACG TTCTCCACCT CCACATCAAG GTTTTTTGTT
CGGCATTCTT TGATGTAGTG AAGTTGGAAA AAATTTAAAA TTAATGCTTA TTGTATAGTA GTTTCAATGT ATCTTAAGAA
AATATTTAGT CCGTGCAGAT TGAATTTAAA ATTTATTAGA TTTTATGATA CTCTAATGAG ATATATTGTC ATATTCTAGA
GTTA

>Vigan.04G017700.01
ATGGCTCTTC CAAGACCAAG CAGTGAAGAG AAAGCCCTTT CTCAGCTCAA AGAAGGAACA GCATCATCAT CAGCAGCAGC
ACCACCTTCA TCATCTTCTT CATGGAATAG GCTTCACACT TTCTCTCCTT TGAATCTACA CAACAAGACT AGCAAAATTG
AAGACAGTGA TGAAGATATG TTCACAGTTC CAGATGTCGA GACCACACCC ATTAATGTTC ATTCTCATCC AAACAGTAAC
CTTAAACAAT CTAACGTGAC AGAACCTCAG TTTCAAACTG GTTTCCCTGG AAAGCGTCGC AGGGGAAGAA ACCCTGCAGA
TAAGGAACAT AGACGTCTCA AGAGGTTGTT GAGAAATAGA GTTTCTGCTC AACAAGCTCG AGAAAGAAAG AAGGTTTATG
TGAATGATTT GGAAGCAAGA GCCAAAGAGT TGCAAGATAA AAATGCTATC TTAGAAGAAC GTATCTCTAC TTTGATAAAT
GAGAACACCA TGCTTAGAAA GGTTCTTATG AATGCCAGGC CAAAAGTTGA TGATAGTAAT GAACAAAAGC AAGAGCACTT
AAGTAAGAGC TAA

>Vigan.04G017700.01
MALPRPSSEE KALSQLKEGT ASSSAAAPPS SSSSWNRLHT FSPLNLHNKT SKIEDSDEDM FTVPDVETTP INVHSHPNSN
LKQSNVTEPQ FQTGFPGKRR RGRNPADKEH RRLKRLLRNR VSAQQARERK KVYVNDLEAR AKELQDKNAI LEERISTLIN
ENTMLRKVLM NARPKVDDSN EQKQEHLSKS *