GBrowse Details

Vigan.03G278100.01

Basic Information:
Name: Vigan.03G278100.01
Multiple alignment
Variant Information
Position: Chr03:41760798..41765018 (+ strand)
Length: 4221
Functional Information:
Description: Similar to Uncharacterized protein. [I1MXU1, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: transferase activity, transferring acyl groups (GO:0016746)
InterPro: Phospholipid/glycerol acyltransferase (IPR002123)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.57,3.75,2.66,3.86,2.06,1.65,5.13,1.51
Arabidopsis thaliana homolog: AT1G75020.1
Automatic updates:
Name: NM_001254454 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4-like (LOC100808657), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:41760798..41762820 (+ strand)
Length: 2023
Type: five_prime_UTR
Position: Chr03:41762821..41763392 (+ strand)
Length: 572
Type: CDS
Position: Chr03:41763625..41763755 (+ strand)
Length: 131
Type: CDS
Position: Chr03:41764508..41764956 (+ strand)
Length: 449
Type: CDS
Position: Chr03:41764957..41765018 (+ strand)
Length: 62
Type: three_prime_UTR

>Vigan.03G278100.01 class=Sequence position=Chr03:41760798..41765018 (+ strand)
AGGTTAGAAA ACAGAGTAAC GTAATGACAA CCCAAACTCT GAAACAACAC CGTTGGGATC TCGAAGTGGA CCCAAATCTC
TTTTCACTGT TGTACAGCGA AGCTGCACAG TAGGTCTCCC TGAGCGGCAC CGCTGCTGAA TTTTCCCCAA CCCAATTTAA
TTTCTCAGAT TCATAATCCC TGTTTCATTC ATTGCTCTTC AACTCACCAA CAATAAGAAG AAAAACAGAG CAAAACAAGA
GCTCTGAGAA TCTCCACGCA AGGTGAGTTT TTTAAGTCAA CCCACTATTC AAGTTTACGT GTTCTCTTCT GGGTTCTCTT
TTCTTTGCGT GTTAATTATC TCCCCTTTAT GGAATCTCAA TTCCGTGTTT GTTTGTATTT CTGAGGAATT TTTATCGTGG
TTGGTGGTGT GTGCGTGTTG GATTCAACGA GGGGAGGTGG TCAAAACTTT GGAATATTTT CAAAAAATGC TTTCTTTATC
GGTTTAACTT TTGTTATGTA TTATGGGAAA CAGGGTTTTG GATTCGAAAC GTGTTTATTC ATTCCCCAAT AACTGGTGGT
TGTAATATGG GAAGCTGTTG TTCTTTGATC GGAAATGGGG TTGGGGTGTT TAGCCAGAGA AATTGGTGTG CTAAGTAGGT
TTGGAATTGC CTTCTCTGGT TCAACATTGG GATTCCAAGA TGGTTTTGGG AGATTTATTG AGAGAGAAGT TTTGAAAATT
TCAAGTTGAT AGCAGAGAAG TATTGAAAGT TTCAAATTTC AACAATCCCC TGTTATTTCA GAAGTGTTTC TCAAGACCAG
TTTCTCTCTA TATTTTTTTC TTTTGCCTTG CTGTGTGTTT TGGTCCTCAG TTTTTATACT AGATACCACC AAGGTTGGGT
ATTGTGTACG AGGTTAGTGT CTCATAACAC AGTGACCAAA GACTTGAATA TCTGATGAGA GAGGTGTTTG CATTTATTGG
TCAATCATGT TTCCAACAGG ATTGCATCTA AAAAGAATAA CCAATTACTA CTCCTGAGAA AGGTTTTAAA ATGTGATTTT
GTTCAAGAAA TTGTTTCATT ACAATTCTTG ATATTTCAGA AAATTACAAA ATGTGACTTG TGTGCCCACT ATTGTAGATG
TCCAAGTACC AAAAACCTCG ATGCTGCATC TAAAATTGTG TGGAAGAACT TTTCTAAAAC CTTGGTAATA GCATTTGTTT
TTAAAAACTG TTTTCTGATG TACCTTGATT TAATTTTTAT TTTTGTTTCC ATAACATGTA TAAGAAACAG TGAAAACCGA
AAATAAATAT AAGAGAAAGT TGCGTTCATA TTTCTTTATG TAATATGCAG AGTATTTTTG TAATTAAAAG TGAAAATTAA
ATGAAAGCAG AAAACCTTTG TTTTAATTCA GGAGAAACAT TCTCCTCTTT CTTAACCACA CATGTCATTT AGTCAGTTGC
TGCATTATGG TACCCTTGAA CATTTTACTG TGCATGTGGT TGATGGTTTG GCATTTCATC TTCTCTTGCA TATTGAAATT
TTTTGTGTCA GAGATTTTAT GCTACTGTAC AATCCATCTT TTTGCAATTT AAATGTATCG GTACTTACTG TCTTGTTCTT
ATGCTACTTG GGATTTGGGA TTGTCTGCTG AAAGCAACTT TTTCAACCCT TGTAGAGTTC AAATTCTCCC TTGGATTTTT
TATACCATCT TTTGAAGTAA ATGTATATTA AAATTTCTTT TAATATATTT TAAAACATCA AAACTAATCC AAATCCAACC
TCTACACAGC AATTGAAAAT ACTAAATACT GTAGTTCCCA ATTTATTGAC TGTGGTTACA AAACATTTAA TGAATACTTC
TAGTTGAAAT GTAAGTATTA AATGATTTTA TTACTTCTGG TACAATAAAT ACATTCTGGT TGATAAACAA TTTTTTGTCT
GATACCATTG CTGTTAGCAT ACTTGTCCAG AATTGGATAT TATCAAATAA CACTACAGTA CATTATTGCA GAAGGAAAGT
TTTTCAACAG TTTCCTGAAG AAGATGGAAG TTAGCGGGCC AGTGAAATCT GAAAATAGAT TAAAGCACCG ACCCTTGACC
CCTCTTAGGT TGTTGAGGGG TATAATATGT TTAGTGGTAT TTCTTTCTAC AGCTTTTATG TGTTTAGTGT ATTTTGTGCC
AGTGGCAGTT GTAGGATTGC GGCTTTTCAG CATACGTTAT AGTAGGAAGA CAGTGTCATT CCTGTTTGGA CTTTGGTTAT
CTCTGTGGCC ATCTTTGTTC GAAAAGATTA ATAAAACCAA AGTTGTGTTT TCTGGGGATA GTGTTCCAAT GAAGGAACGT
GTTTTGCTTA TTGCTAATCA CAGAACTGAG GTTGATTGGA TGTACTTGTG GGATCTTGCA CTTAGAAAAG GGACACTGGG
ATGCATAAAG TACATCCTTA AAAACAGCTT GATGAAACTA CCTATCTTTG GTTGGGGATT TCACATTCTG GAGTTCATTG
CAGTGGAGAG GAAGTGGGAG GTAGATGAGC AAATACTGCA CCAAAAGCTT TCAACTTTAC AGGATCCTCA AGATCCCTTA
TGGCTAGCTC TTTTTCCCGA AGGAACAGAT TATACGTACT ACCTTGGATC TTGTCTTTTA ATTTCCAACT GCTTTTATTG
TCATTGGATA ATCAACATCA ACTCTTTTCA GTTCCACAAA TCATTTCATT TGATACTGTC TGTTTGCAGT TGATGTCGTG
TTTTGTCTGG CATGCTGCAA TTTGTGGATC ATGTTATACC ACACAAACGT AAATACATAG TTCAATTGAG ATGCACACTT
GACATATGAT TTGCTTTCAT TGCGTAGTGA TCAGAAGAGT AAAAACAGTC AAAAATTTGC TGCTGAAACT GGTCTCCCTG
TGCTGAAAAA TGTATTACTT CCGAAAACAA AGGGGTTTCA TGCTTGCTTG GAAGCCCTAC GAGGCTCATT GGATGCAGGT
TTACAATTTC TTTCCTCTTT TCTAAGACTC TAAAGTCAAT TCAAAATGAT CCTGTAGTGA CTATTTATGA TGTTGTGAAT
GTAATCTGTC TTACCAAATG CATCTGACTC TGCTTTAGAA AATTTTAACT TAACAATTTC ACCATAACCT CTCCCTATCA
CTTCAAGTTT GTATGTCTTA ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATACATATAT GTGTGTGTTT
TTGTGGTACT GTGGCCCTGC TGAGTCTTCA AAATGAATTG ATATTGGTGT ATTAAAAAAG TTTTTAATAT ATTTTAAAAC
ATCAAAATCA GTGTCAATCA ATATATTTTG AAGACTCACC AAAGAAATAA TATAAAAAAT TTATCAGTGA ATCTAAATTC
ATGTTTGTGT GTGTATATAT ATATTATGCT ACATCACATG TCCAAGCTTA CATGTAATAT GTTGTTCCTC CAAAATAAAC
TGATGTTGTT GGTATATTAA AAAAGTTTTT AAATATTTTA AAACATCAAA ATCAGTGTCT ATGGATGTAT TTTGAAGATT
CAGGAGGAAA ATAAAACCAA AAACTCAGCA GAAAATCACA TATCAAGTTT GCTTGTACTG TCTTTTTGAT GAACTTTTGA
CATGAGGGTC ACTGTCTATT TGCACAATAC TGTATAACTA TTTGTTGGAG GGATTTTGTT TTCAATTTTT CTGTTAAGTT
TGTTGAACAT TGTGAGTGAA TTACGTGCAG TGTACGATGT GACAATTGCA TACAAAAATC AATGTCCTTC ATTTCTGGAC
AATGTGTTTG GTGTTGATCC TTCAGAGGTG CACTTGCATG TAAGGTGTAT TCCAGTGGAG GAGATTCCTG CTTCTGAAAG
CAAAGCTTCA TCATGGTTAA TAGAAAAGTT CAAGATGAAG GACCAATTGC TTTCAGATTT CAAGATTCAT GGTCATTTCC
CAGATGAGCA AAATGAAAAT GAAATTTCTA CATTTAAGAG CCTATTCTCT TTTACAGTGA TAGTTTCTTT TACTGCCATG
TTTATCTATT TTACATTATT TTCTGTGGTT TGGTTCAAAG TGTATGTAGG TCTATCTTGT GCATATCTTG CTCTTGCAAC
TCGCTTCAAT TTTCAATTGA TGCCTCTAAG TAACTATGTT CATGCACTTC ATAACACCAA GAAACAAAAC ACTGAATAGT
GTTCTCAATT TTATATTACA ATGTACTATC TTGCTCTTCA ACTTTATATT TTCAGGGTCA A

>Vigan.03G278100.01
AGGTTAGAAA ACAGAGTAAC GTAATGACAA CCCAAACTCT GAAACAACAC CGTTGGGATC TCGAAGTGGA CCCAAATCTC
TTTTCACTGT TGTACAGCGA AGCTGCACAG TAGGTCTCCC TGAGCGGCAC CGCTGCTGAA TTTTCCCCAA CCCAATTTAA
TTTCTCAGAT TCATAATCCC TGTTTCATTC ATTGCTCTTC AACTCACCAA CAATAAGAAG AAAAACAGAG CAAAACAAGA
GCTCTGAGAA TCTCCACGCA AGGTGAGTTT TTTAAGTCAA CCCACTATTC AAGTTTACGT GTTCTCTTCT GGGTTCTCTT
TTCTTTGCGT GTTAATTATC TCCCCTTTAT GGAATCTCAA TTCCGTGTTT GTTTGTATTT CTGAGGAATT TTTATCGTGG
TTGGTGGTGT GTGCGTGTTG GATTCAACGA GGGGAGGTGG TCAAAACTTT GGAATATTTT CAAAAAATGC TTTCTTTATC
GGTTTAACTT TTGTTATGTA TTATGGGAAA CAGGGTTTTG GATTCGAAAC GTGTTTATTC ATTCCCCAAT AACTGGTGGT
TGTAATATGG GAAGCTGTTG TTCTTTGATC GGAAATGGGG TTGGGGTGTT TAGCCAGAGA AATTGGTGTG CTAAGTAGGT
TTGGAATTGC CTTCTCTGGT TCAACATTGG GATTCCAAGA TGGTTTTGGG AGATTTATTG AGAGAGAAGT TTTGAAAATT
TCAAGTTGAT AGCAGAGAAG TATTGAAAGT TTCAAATTTC AACAATCCCC TGTTATTTCA GAAGTGTTTC TCAAGACCAG
TTTCTCTCTA TATTTTTTTC TTTTGCCTTG CTGTGTGTTT TGGTCCTCAG TTTTTATACT AGATACCACC AAGGTTGGGT
ATTGTGTACG AGGTTAGTGT CTCATAACAC AGTGACCAAA GACTTGAATA TCTGATGAGA GAGGTGTTTG CATTTATTGG
TCAATCATGT TTCCAACAGG ATTGCATCTA AAAAGAATAA CCAATTACTA CTCCTGAGAA AGGTTTTAAA ATGTGATTTT
GTTCAAGAAA TTGTTTCATT ACAATTCTTG ATATTTCAGA AAATTACAAA ATGTGACTTG TGTGCCCACT ATTGTAGATG
TCCAAGTACC AAAAACCTCG ATGCTGCATC TAAAATTGTG TGGAAGAACT TTTCTAAAAC CTTGGTAATA GCATTTGTTT
TTAAAAACTG TTTTCTGATG TACCTTGATT TAATTTTTAT TTTTGTTTCC ATAACATGTA TAAGAAACAG TGAAAACCGA
AAATAAATAT AAGAGAAAGT TGCGTTCATA TTTCTTTATG TAATATGCAG AGTATTTTTG TAATTAAAAG TGAAAATTAA
ATGAAAGCAG AAAACCTTTG TTTTAATTCA GGAGAAACAT TCTCCTCTTT CTTAACCACA CATGTCATTT AGTCAGTTGC
TGCATTATGG TACCCTTGAA CATTTTACTG TGCATGTGGT TGATGGTTTG GCATTTCATC TTCTCTTGCA TATTGAAATT
TTTTGTGTCA GAGATTTTAT GCTACTGTAC AATCCATCTT TTTGCAATTT AAATGTATCG GTACTTACTG TCTTGTTCTT
ATGCTACTTG GGATTTGGGA TTGTCTGCTG AAAGCAACTT TTTCAACCCT TGTAGAGTTC AAATTCTCCC TTGGATTTTT
TATACCATCT TTTGAAGTAA ATGTATATTA AAATTTCTTT TAATATATTT TAAAACATCA AAACTAATCC AAATCCAACC
TCTACACAGC AATTGAAAAT ACTAAATACT GTAGTTCCCA ATTTATTGAC TGTGGTTACA AAACATTTAA TGAATACTTC
TAGTTGAAAT GTAAGTATTA AATGATTTTA TTACTTCTGG TACAATAAAT ACATTCTGGT TGATAAACAA TTTTTTGTCT
GATACCATTG CTGTTAGCAT ACTTGTCCAG AATTGGATAT TATCAAATAA CACTACAGTA CATTATTGCA GAAGGAAAGT
TTTTCAACAG TTTCCTGAAG AAGATGGAAG TTAGCGGGCC AGTGAAATCT GAAAATAGAT TAAAGCACCG ACCCTTGACC
CCTCTTAGGT TGTTGAGGGG TATAATATGT TTAGTGGTAT TTCTTTCTAC AGCTTTTATG TGTTTAGTGT ATTTTGTGCC
AGTGGCAGTT GTAGGATTGC GGCTTTTCAG CATACGTTAT AGTAGGAAGA CAGTGTCATT CCTGTTTGGA CTTTGGTTAT
CTCTGTGGCC ATCTTTGTTC GAAAAGATTA ATAAAACCAA AGTTGTGTTT TCTGGGGATA GTGTTCCAAT GAAGGAACGT
GTTTTGCTTA TTGCTAATCA CAGAACTGAG GTTGATTGGA TGTACTTGTG GGATCTTGCA CTTAGAAAAG GGACACTGGG
ATGCATAAAG TACATCCTTA AAAACAGCTT GATGAAACTA CCTATCTTTG GTTGGGGATT TCACATTCTG GAGTTCATTG
CAGTGGAGAG GAAGTGGGAG GTAGATGAGC AAATACTGCA CCAAAAGCTT TCAACTTTAC AGGATCCTCA AGATCCCTTA
TGGCTAGCTC TTTTTCCCGA AGGAACAGAT TATACTGATC AGAAGAGTAA AAACAGTCAA AAATTTGCTG CTGAAACTGG
TCTCCCTGTG CTGAAAAATG TATTACTTCC GAAAACAAAG GGGTTTCATG CTTGCTTGGA AGCCCTACGA GGCTCATTGG
ATGCAGTGTA CGATGTGACA ATTGCATACA AAAATCAATG TCCTTCATTT CTGGACAATG TGTTTGGTGT TGATCCTTCA
GAGGTGCACT TGCATGTAAG GTGTATTCCA GTGGAGGAGA TTCCTGCTTC TGAAAGCAAA GCTTCATCAT GGTTAATAGA
AAAGTTCAAG ATGAAGGACC AATTGCTTTC AGATTTCAAG ATTCATGGTC ATTTCCCAGA TGAGCAAAAT GAAAATGAAA
TTTCTACATT TAAGAGCCTA TTCTCTTTTA CAGTGATAGT TTCTTTTACT GCCATGTTTA TCTATTTTAC ATTATTTTCT
GTGGTTTGGT TCAAAGTGTA TGTAGGTCTA TCTTGTGCAT ATCTTGCTCT TGCAACTCGC TTCAATTTTC AATTGATGCC
TCTAAGTAAC TATGTTCATG CACTTCATAA CACCAAGAAA CAAAACACTG AATAGTGTTC TCAATTTTAT ATTACAATGT
ACTATCTTGC TCTTCAACTT TATATTTTCA GGGTCAA

>Vigan.03G278100.01
ATGGAAGTTA GCGGGCCAGT GAAATCTGAA AATAGATTAA AGCACCGACC CTTGACCCCT CTTAGGTTGT TGAGGGGTAT
AATATGTTTA GTGGTATTTC TTTCTACAGC TTTTATGTGT TTAGTGTATT TTGTGCCAGT GGCAGTTGTA GGATTGCGGC
TTTTCAGCAT ACGTTATAGT AGGAAGACAG TGTCATTCCT GTTTGGACTT TGGTTATCTC TGTGGCCATC TTTGTTCGAA
AAGATTAATA AAACCAAAGT TGTGTTTTCT GGGGATAGTG TTCCAATGAA GGAACGTGTT TTGCTTATTG CTAATCACAG
AACTGAGGTT GATTGGATGT ACTTGTGGGA TCTTGCACTT AGAAAAGGGA CACTGGGATG CATAAAGTAC ATCCTTAAAA
ACAGCTTGAT GAAACTACCT ATCTTTGGTT GGGGATTTCA CATTCTGGAG TTCATTGCAG TGGAGAGGAA GTGGGAGGTA
GATGAGCAAA TACTGCACCA AAAGCTTTCA ACTTTACAGG ATCCTCAAGA TCCCTTATGG CTAGCTCTTT TTCCCGAAGG
AACAGATTAT ACTGATCAGA AGAGTAAAAA CAGTCAAAAA TTTGCTGCTG AAACTGGTCT CCCTGTGCTG AAAAATGTAT
TACTTCCGAA AACAAAGGGG TTTCATGCTT GCTTGGAAGC CCTACGAGGC TCATTGGATG CAGTGTACGA TGTGACAATT
GCATACAAAA ATCAATGTCC TTCATTTCTG GACAATGTGT TTGGTGTTGA TCCTTCAGAG GTGCACTTGC ATGTAAGGTG
TATTCCAGTG GAGGAGATTC CTGCTTCTGA AAGCAAAGCT TCATCATGGT TAATAGAAAA GTTCAAGATG AAGGACCAAT
TGCTTTCAGA TTTCAAGATT CATGGTCATT TCCCAGATGA GCAAAATGAA AATGAAATTT CTACATTTAA GAGCCTATTC
TCTTTTACAG TGATAGTTTC TTTTACTGCC ATGTTTATCT ATTTTACATT ATTTTCTGTG GTTTGGTTCA AAGTGTATGT
AGGTCTATCT TGTGCATATC TTGCTCTTGC AACTCGCTTC AATTTTCAAT TGATGCCTCT AAGTAACTAT GTTCATGCAC
TTCATAACAC CAAGAAACAA AACACTGAAT AG

>Vigan.03G278100.01
MEVSGPVKSE NRLKHRPLTP LRLLRGIICL VVFLSTAFMC LVYFVPVAVV GLRLFSIRYS RKTVSFLFGL WLSLWPSLFE
KINKTKVVFS GDSVPMKERV LLIANHRTEV DWMYLWDLAL RKGTLGCIKY ILKNSLMKLP IFGWGFHILE FIAVERKWEV
DEQILHQKLS TLQDPQDPLW LALFPEGTDY TDQKSKNSQK FAAETGLPVL KNVLLPKTKG FHACLEALRG SLDAVYDVTI
AYKNQCPSFL DNVFGVDPSE VHLHVRCIPV EEIPASESKA SSWLIEKFKM KDQLLSDFKI HGHFPDEQNE NEISTFKSLF
SFTVIVSFTA MFIYFTLFSV VWFKVYVGLS CAYLALATRF NFQLMPLSNY VHALHNTKKQ NTE*