GBrowse Details

Vigan.03G262600.01

Basic Information:
Name: Vigan.03G262600.01
Multiple alignment
Variant Information
Position: Chr03:40256830..40259097 (+ strand)
Length: 2268
Functional Information:
Description: Similar to Uncharacterized protein. [W5FMG1, Triticum aestivum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:8.46,3.05,2.84,3.01,3.71,3.44,5.73,2.86
Automatic updates:
Name: NM_001349984 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max hypothetical protein (LOC100527274), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:40256830..40256941 (+ strand)
Length: 112
Type: five_prime_UTR
Position: Chr03:40256942..40257051 (+ strand)
Length: 110
Type: CDS
Position: Chr03:40257892..40258087 (+ strand)
Length: 196
Type: CDS
Position: Chr03:40258088..40259097 (+ strand)
Length: 1010
Type: three_prime_UTR

>Vigan.03G262600.01 class=Sequence position=Chr03:40256830..40259097 (+ strand)
AAATTTCAAA CAATGAAACA ATATAAAAAG TTTGTATTTT GCCGGAATTT AAATTAGATT GAAATTGTAA GAGAAGTTGA
AGGAGAGAGA AAAAAGAAGA GAGAGAGAGA ACATGGGTCT CTGCTTTGGT TGCTTCGGCG CAGACAAGCG CATGAGCAAG
GAAGAAGAGA GGTTGGCCTC TGAAGAAGCG CGTGCTAAAG CTGCTGAAGC GGCACAGAAA AGGTTTTACC TTTTTCCATT
TCTCAACATC CCTCTTTCTT TAACTCTCTT TCTTCTATAT TCTCTAATCT TTTAACTTAA CCCTTCAATT TCTGGAAAAG
GAAAAAGGGT TTTTATTTGT ATGTTAGACC CTTAATCATT GTACTTTTCT TGATTAAATA TGTATCTGCT TTTGAATTCG
CTTTTGCTTT ATACCTTGCT GATCACACTT TTTGGTGTTT TATTTTATTC TTCAGATCAT TAGTAAACCC CAATTTGAAA
TATATAAAGA AAAGGGGAAT TTTGGTAAGA GAAATTCTAG GGATGTACTA TCGGTCATAC TCCTTCAATA TTTCAAGATC
ACAGAATCTC GTGGATCAAG CGCCTTGTTT AATTAGCTTC TATAATGAAT TCGTAGTTTT CAATAATTGA CTTATAAATG
AAAGAGTATT CTATAGTGTG TTAAAGAATG TGTTATTAGC ACTTCTGTTG TTGTATAGTA CTGTGTCCTT AATTTTGTTT
ATATAGCTCA CTGCTTCTTC TTATCCTTGA ATGCCATACA TTGATATGTA ATGCATTCCA TACACTAAAG GCATTATACC
AATATCACAA TTGTCTGGGA AAATACAATG TCAATGTCTC TGGGGATTGT TTATTCGTGA CACTGTTAGG TACTACTACG
TGACATTCTA AAATATTTGT ACAAGTCAAT AGAAAATGGG TGCAAGGCTT ACTGCAGTTA ACAAATATAT AATGAAATAT
AGTCTACTTT TAGAGGTCGG GTGAAGCATG ATGAAACAAC AATAGACATT ATAATGTTGT TATAACTGCA GACCAATTTG
TGCGTGTTAA TTGGAATTGC AGACAAGAGC AATTTGAGAA ATCTGCAGCA GGACGAGCTG CACGTGCACA GCAACAGGCA
ATGGCAAAGC AATCTGCAAA CTCCAACAAA GGCGAACCAG TTCTAAAGGT TTGGAGATTC AAGACACCAC TTATTTTCTT
GAGAACTATT AATAGAGAGT TTGATACTGC CATTAATCTG CATAAGTGTT ACATATGAAT CTGGAGATAT GTTCGTGCTC
TTATTATGAG TTTGTTGAAT AAGTTTTTTA TTTCCTTAAA AATGTCATTG CCCTGTAATA TACTGCTTTC TTGCCTGTGC
TTTTTGACTA ACAACCTTGA CATAAGTTTG TACCATACTC ATTTTACTAT ATCTCAAATG TTTTGGTTCT TCCATTTGTG
ACTGCAGTGG CAGATGGGTT GAGGTTAGGC ACTCTGTGGA ATCAACTTTT ATTAGGTGTA AGGTGAATAA TCCATCTGAT
GAATTCTTCT TTGTCCATTT ATTTGGTTAT GAAACTAGTT TAGTTTTAAG TTCTATAAAA ATATAGCAGA TTTTATTTGA
AGATAACTAG CATTAACATA ACATATTAAC ATCTATATAA AAATGCATAG AAACGTAAAC AATAAAACTG AGTTTAGGCA
TATTTTGGAT TAAATCAATT TGGGAAAAAG GTGGGGTATA GCCTATTGTG AACCGACGAA ACTGTTTTTA GTCTCATTTC
TTGGCCGTAA ACAATATTTG CATAAACAGA AGTTTAAAGT CTATGTACTG CAGCTCACTT CAATAAAATA TTAATTGGAA
TATTTTTTTT TTCTGGAACA TTCTGTTCAA GCATTCCATA TGTAGTAATA TAGCAGTATC TGTAAAGGGC TACTCAACTA
CACCACTGAC CACTTCATCA AAATATATAG TGACAGAACA TGTATTATTT TTGTATGGGG TAATTTGGAA AGTATTTTGA
AGGACCAAAA ATTTAAAATG CAAGGGGGAG GGTAGCAAAT GAGTTGGTTT CTGATTTAGA TCTTCTCAGT AAATACATTC
CAGTTTTACT GGAGTAAACA TATCATATAG AGATCTGCCA CTGAGCCACT TGTATTTTTT GCAACATATA TTGTTAAAGT
AGAGACCAAT ATCAAGTACC GTTTTACTTC TCAGACTGCA AATGTCTCTT CATGGATGCG ATAATTGTCT CATTAGTTTT
CGTTTCTTGT GTTACAGTAT TGATGACA

>Vigan.03G262600.01
AAATTTCAAA CAATGAAACA ATATAAAAAG TTTGTATTTT GCCGGAATTT AAATTAGATT GAAATTGTAA GAGAAGTTGA
AGGAGAGAGA AAAAAGAAGA GAGAGAGAGA ACATGGGTCT CTGCTTTGGT TGCTTCGGCG CAGACAAGCG CATGAGCAAG
GAAGAAGAGA GGTTGGCCTC TGAAGAAGCG CGTGCTAAAG CTGCTGAAGC GGCACAGAAA AGACAAGAGC AATTTGAGAA
ATCTGCAGCA GGACGAGCTG CACGTGCACA GCAACAGGCA ATGGCAAAGC AATCTGCAAA CTCCAACAAA GGCGAACCAG
TTCTAAAGGT TTGGAGATTC AAGACACCAC TTATTTTCTT GAGAACTATT AATAGAGAGT TTGATACTGC CATTAATCTG
CATAAGTGTT ACATATGAAT CTGGAGATAT GTTCGTGCTC TTATTATGAG TTTGTTGAAT AAGTTTTTTA TTTCCTTAAA
AATGTCATTG CCCTGTAATA TACTGCTTTC TTGCCTGTGC TTTTTGACTA ACAACCTTGA CATAAGTTTG TACCATACTC
ATTTTACTAT ATCTCAAATG TTTTGGTTCT TCCATTTGTG ACTGCAGTGG CAGATGGGTT GAGGTTAGGC ACTCTGTGGA
ATCAACTTTT ATTAGGTGTA AGGTGAATAA TCCATCTGAT GAATTCTTCT TTGTCCATTT ATTTGGTTAT GAAACTAGTT
TAGTTTTAAG TTCTATAAAA ATATAGCAGA TTTTATTTGA AGATAACTAG CATTAACATA ACATATTAAC ATCTATATAA
AAATGCATAG AAACGTAAAC AATAAAACTG AGTTTAGGCA TATTTTGGAT TAAATCAATT TGGGAAAAAG GTGGGGTATA
GCCTATTGTG AACCGACGAA ACTGTTTTTA GTCTCATTTC TTGGCCGTAA ACAATATTTG CATAAACAGA AGTTTAAAGT
CTATGTACTG CAGCTCACTT CAATAAAATA TTAATTGGAA TATTTTTTTT TTCTGGAACA TTCTGTTCAA GCATTCCATA
TGTAGTAATA TAGCAGTATC TGTAAAGGGC TACTCAACTA CACCACTGAC CACTTCATCA AAATATATAG TGACAGAACA
TGTATTATTT TTGTATGGGG TAATTTGGAA AGTATTTTGA AGGACCAAAA ATTTAAAATG CAAGGGGGAG GGTAGCAAAT
GAGTTGGTTT CTGATTTAGA TCTTCTCAGT AAATACATTC CAGTTTTACT GGAGTAAACA TATCATATAG AGATCTGCCA
CTGAGCCACT TGTATTTTTT GCAACATATA TTGTTAAAGT AGAGACCAAT ATCAAGTACC GTTTTACTTC TCAGACTGCA
AATGTCTCTT CATGGATGCG ATAATTGTCT CATTAGTTTT CGTTTCTTGT GTTACAGTAT TGATGACA

>Vigan.03G262600.01
ATGGGTCTCT GCTTTGGTTG CTTCGGCGCA GACAAGCGCA TGAGCAAGGA AGAAGAGAGG TTGGCCTCTG AAGAAGCGCG
TGCTAAAGCT GCTGAAGCGG CACAGAAAAG ACAAGAGCAA TTTGAGAAAT CTGCAGCAGG ACGAGCTGCA CGTGCACAGC
AACAGGCAAT GGCAAAGCAA TCTGCAAACT CCAACAAAGG CGAACCAGTT CTAAAGGTTT GGAGATTCAA GACACCACTT
ATTTTCTTGA GAACTATTAA TAGAGAGTTT GATACTGCCA TTAATCTGCA TAAGTGTTAC ATATGA

>Vigan.03G262600.01
MGLCFGCFGA DKRMSKEEER LASEEARAKA AEAAQKRQEQ FEKSAAGRAA RAQQQAMAKQ SANSNKGEPV LKVWRFKTPL
IFLRTINREF DTAINLHKCY I*