GBrowse Details

Vigan.03G230000.01

Basic Information:
Name: Vigan.03G230000.01
Multiple alignment
Variant Information
Position: Chr03:36273606..36276257 (+ strand)
Length: 2652
Functional Information:
Description: Similar to Cytochrome b-c1 complex subunit 7. [I3SRU8, Lotus japonicus]
GO: Biological Process: mitochondrial electron transport, ubiquinol to cytochrome c (GO:0006122)
Cellular Component: mitochondrial respiratory chain complex III (GO:0005750)
InterPro: Cytochrome b-c1 complex subunit 7 (IPR003197)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:124.27,68.40,156.96,123.81,210.92,355.05,171.12,128.94
Arabidopsis thaliana homolog: AT5G25450.1
Automatic updates:
Name: NM_001250210 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100499867 (LOC100499867), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:36273606..36273776 (+ strand)
Length: 171
Type: five_prime_UTR
Position: Chr03:36273777..36273870 (+ strand)
Length: 94
Type: CDS
Position: Chr03:36273960..36274117 (+ strand)
Length: 158
Type: CDS
Position: Chr03:36274790..36274837 (+ strand)
Length: 48
Type: CDS
Position: Chr03:36276029..36276097 (+ strand)
Length: 69
Type: CDS
Position: Chr03:36276098..36276257 (+ strand)
Length: 160
Type: three_prime_UTR

>Vigan.03G230000.01 class=Sequence position=Chr03:36273606..36276257 (+ strand)
GATAAATTGG CAATTGAAGG AATAAACGAC ACGTCGTTGG GTAAAAGTAA TAGTCGTAGA CGCAAAGAGC GGTGTGGTGC
AAAATAAGAA GCACTTCTGT TACTCTTCTT CTGTGATTAT TCGAAAAACT CTAACGAAAG AGCGAGAAAG AAAGCGAAGA
GAGCAATTGC AATGGCGTCG TTTGTTCAAT CTATTCTGGA TCCAAAGAAG AGCTGGTTCG CCGCTCAGCA CATGAAATCC
CTCGTCAAAC GCCTCAGCAA ATACGGTTCA TTCTTCTTTT CTCTCTTGTC GCTCCAATTT CCGCAACCCT AATAGTGCCG
ATTTGTGAAA ATCGTTTTGG GTTTTGTAAA TTAGGGCTCC GATACGACGA TTTGTACGAT CCTTACTACG ATCTGGATGT
GAAGGAGGCG CTGAATCGGC TCCCGAAGGA GGTGGTGGAC GCCCGCCACG CTCGTCTCAA ACGCGCCATC GACCTTTCCA
TGAAGCACGA GTACCTCCCT GACGATCTTC AGGTTTTTTT TCTTCTTATT TTTCGTCTAT TTTATTATTA TTGCTGTTGA
GCTTAGTTTC GAGGTATCCT GTTCTTGTTT CTGTTGACTG GTTCCAATTA ATTAGGGTTT TAGAGATGAT GGATATGTAT
GAATCTATTG CCTACAATGG TACACGAGGG ATGTGTATGA ATCTATTACT TACTTGGTCT TTCATAGATT TGTTGCTTTT
GTTGGGTTTT AGTTACAACC AAGTTGGATG AAAAAAGAAA ATCATGTGTT GAAATGCTAT GATGTGACTG GGTCAAATTC
ATTAGGTTAA AGACTTGATG GATGGATGTA TATGAATGTA TTACTAAATG CTTACAGTTG ACTGACTTAG AGGATGTACA
GAGTCATGAT TTTGGATTAA TATGGCTAGA TGGTGAGAAA TGCATTTTGA GGGTTTGAGA AGTTTAGTCA CTGTAACCTA
ATCATGATGT GGAACTACCT GATAATATTG GACAGTCCAA ATTTTCGCTA AATGTGCTAA ATTGTCTGAG AAAACACTAA
CTAGTTGTGT TTGTTTCTTA TGTGTGTGAA GATTTAATGT CCATTTTGGA GTATGTGCAT GTATGAAGAG TTGCATATTA
TGAAACTTTT GATTATAATG TTGATTTTGG ATTCTCATAT TTTCTGGTGT TGCCTTAATG ACAGGCTATG CAAACACCGT
TCAGGGGCTA CCTTCAGGAT ATGCTGGCTC TTGTAAGTGC TGTTGTTATG TGTAATTAAA TGTGTGTTGG CGCATGTTTC
ATTATAATAT TTGATGGAGT TGATTACATC CTTCTTTATT CTCCGTGTCT TTTTTGTGAA ACCAATGAAA ACAAAAGTTG
AACACATAAA CAGTATTTTG TAACATGCAT TGCTTTTATT GTTAGTGCTC TTGTTGTTGA TAGAACTATC ATTTCAAGAA
ATATTAGTAT ATTTGATGAT TCACTTGTAT TCTATATTTG AAGTATAAAG AAATGAAGAC TTTCTTTTGT TTCACACTAT
CACTTCAATT CTGTAGATCT CTTTGTCAAT GCCTACTTGC TGTAATAATA GTCAGGCAAA TTTTCTTTAG CTTAGAATAG
CTTATCCCTC CGTCCTTGCA ACATCATTTT GCTTTCAGAA TTATATTTGG AGAAAATATT GGCAATATAC ACTGTCCATA
GAAAAGAAGA AATGAATTTC AGTTTTGTTG TGGGGTTTTA GGGGAAGATG GTTTTATGAC TCCTGATTTG TAATAATTAA
TTGGCTACTA TTTTGAAGCA TGGTTGGTGA GCTTGAGCCT TCTGGGTATG GACTGGTCAT TTGGTGGTGT TAAAGTTATG
ACCTGAAAGC AAATTGTATA TCTAAGAGTA ATGCACAAAA AAGTTCCATT TTATTATAAA GTATAATTAT GTTTTCAGTA
TCTGATATTG AGGATAAATT TGTGTTTGGT TCCTCAAACT GAAAAAATAA ATTTATTTGT CCATCAATTT TTTGTGAAAT
GTTTTCAGTG CATGGTGTCA GACAGTATTA CGGAAGTGAC TTGGCACTCC CAACATTTGA CGCATGTTAT GTTTCAAGCA
ACATGTCACC ATTTTTGTTA ATGTTATCTG GCTGCAGGGA CTGAAAAAAA CTTTTTGAAA TTTGAGGAAC TACAACGTAT
TTTTCTTTCA ATTTGGGGCA CCAAATCAGA TTTATCCCAA ATTTCAGGAA TTAGAAACAT AGTGAAGCCT ATAAATCATT
ATAAAATCAA TCTATTACTT ATCCCAGATT ATAGTATCAC TTTCAGAATA GGTAAGAATT TCTCTCAGGA GACGACTGTG
AGAAGTTTGT CTACTTGTAA GCAGAAGTGT TAAGATATGG ACAATCAACA ACCAAATAGC TGCTAAAATT GTCTCTAAAT
GCTTTGCCAC TTATGACTTG CAGGTGAAGA GGGAGAGAGC AGAACGTGAA GCATTGGGAG GTTTACCCCT ATATCAACGA
TCTATTCCTT GAGTGAATTA AGTATTGCAT GAAGGTATTT TGATTGAAGT GGAGGTTTAC AATGTATTGA TGTTTGTGGT
AGAATGTTTT CTTTTAAGAA GAAAACATGT ACGGTTTCTT GATAAACTTA TATGAAATGC ATTTTTTGAT GGTATAAACT
TGCCTCAGTA GG

>Vigan.03G230000.01
GATAAATTGG CAATTGAAGG AATAAACGAC ACGTCGTTGG GTAAAAGTAA TAGTCGTAGA CGCAAAGAGC GGTGTGGTGC
AAAATAAGAA GCACTTCTGT TACTCTTCTT CTGTGATTAT TCGAAAAACT CTAACGAAAG AGCGAGAAAG AAAGCGAAGA
GAGCAATTGC AATGGCGTCG TTTGTTCAAT CTATTCTGGA TCCAAAGAAG AGCTGGTTCG CCGCTCAGCA CATGAAATCC
CTCGTCAAAC GCCTCAGCAA ATACGGGCTC CGATACGACG ATTTGTACGA TCCTTACTAC GATCTGGATG TGAAGGAGGC
GCTGAATCGG CTCCCGAAGG AGGTGGTGGA CGCCCGCCAC GCTCGTCTCA AACGCGCCAT CGACCTTTCC ATGAAGCACG
AGTACCTCCC TGACGATCTT CAGGCTATGC AAACACCGTT CAGGGGCTAC CTTCAGGATA TGCTGGCTCT TGTGAAGAGG
GAGAGAGCAG AACGTGAAGC ATTGGGAGGT TTACCCCTAT ATCAACGATC TATTCCTTGA GTGAATTAAG TATTGCATGA
AGGTATTTTG ATTGAAGTGG AGGTTTACAA TGTATTGATG TTTGTGGTAG AATGTTTTCT TTTAAGAAGA AAACATGTAC
GGTTTCTTGA TAAACTTATA TGAAATGCAT TTTTTGATGG TATAAACTTG CCTCAGTAGG 

>Vigan.03G230000.01
ATGGCGTCGT TTGTTCAATC TATTCTGGAT CCAAAGAAGA GCTGGTTCGC CGCTCAGCAC ATGAAATCCC TCGTCAAACG
CCTCAGCAAA TACGGGCTCC GATACGACGA TTTGTACGAT CCTTACTACG ATCTGGATGT GAAGGAGGCG CTGAATCGGC
TCCCGAAGGA GGTGGTGGAC GCCCGCCACG CTCGTCTCAA ACGCGCCATC GACCTTTCCA TGAAGCACGA GTACCTCCCT
GACGATCTTC AGGCTATGCA AACACCGTTC AGGGGCTACC TTCAGGATAT GCTGGCTCTT GTGAAGAGGG AGAGAGCAGA
ACGTGAAGCA TTGGGAGGTT TACCCCTATA TCAACGATCT ATTCCTTGA

>Vigan.03G230000.01
MASFVQSILD PKKSWFAAQH MKSLVKRLSK YGLRYDDLYD PYYDLDVKEA LNRLPKEVVD ARHARLKRAI DLSMKHEYLP
DDLQAMQTPF RGYLQDMLAL VKRERAEREA LGGLPLYQRS IP*