GBrowse Details

Vigan.03G185400.01

Basic Information:
Name: Vigan.03G185400.01
Multiple alignment
Variant Information
Position: Chr03:28468957..28471622 (+ strand)
Length: 2666
Functional Information:
Description: Similar to Uncharacterized protein. [G7I281, Medicago truncatula]
InterPro: Early nodulin 93 ENOD93 protein (IPR005050)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:91.97,30.84,60.36,37.81,61.84,59.58,60.35,27.44
Automatic updates:
Name: NM_001248310 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500499 (LOC100500499), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:28468957..28469117 (+ strand)
Length: 161
Type: five_prime_UTR
Position: Chr03:28469118..28469229 (+ strand)
Length: 112
Type: CDS
Position: Chr03:28470054..28470115 (+ strand)
Length: 62
Type: CDS
Position: Chr03:28470504..28470579 (+ strand)
Length: 76
Type: CDS
Position: Chr03:28471122..28471222 (+ strand)
Length: 101
Type: CDS
Position: Chr03:28471223..28471622 (+ strand)
Length: 400
Type: three_prime_UTR

>Vigan.03G185400.01 class=Sequence position=Chr03:28468957..28471622 (+ strand)
ATGACATACG GCAACTCTGA TAGACACGAA CATTCTGCGT ACATACATAT AGTATATTAT AGTATACGGT AATAATAATA
ATTAGCCACC GGGTTTCGGT TCAGAGAACC TGCTACAAAA GAAGAAAAGT TTGTTGAAGA GAGCCAACCA CAACAAAAAC
AATGGGTATT CCGTCGGAAC TTCGGGAAAT CTTCTTACCC AACAAAAAAG ATGTCTTTAT TGCTTCTCCC GCAGAGGATA
GGAGGGTTTT GAGGACCAAA CAATGCACTG ATGGTATTCT CTCTCTCTCT CTTCTTTTTT TTTTGTTATT CTTTTTACAA
GTTTTTTTTT CTGCTTAATG TGTAAAACAT CATTACGTGG AACATGCGTT ATGTTGATTA TGGTTTTCTG TTTATCTCGT
TCCCACATTA GGACACATGA CTTGAAAAAT AGATTTATGT TGTCTTTTGG AGGTTAGATC GATTGATTGA TGGTTACGGG
GGGCCAAGAT GTAAGAATAA TTTTGAATGG TTAATTTTTT GTTTGGATCT TCCGTGTCAA AAGCTAAAGA TTGGGACACA
AAAAATTGAA GTGAAAGAAA TTAATTTATG CTGCCTTAAA CTACAGCTCT AAATGAAAGT TAAGTGAAAC CTACAAACAT
AGCATAGAAG GGAAAGGGTC CTGTTAATTT GTTAGTAGTT GAAGGGAAAA CAGTGTTTTC CTTGGGGAAA TTAGTCATGA
GTGCATGTTC GGTTTAAAGT TACACAAGTA ATTTTACGAA GTTCAACGTA AGATTGTCTT CCAATGTATG ATTTGAGAAG
GAAAAAACAT GTTGCTTCTT GAATAAAGTA CTTCTGAGTG GTGAGAGAAG TGTTACTTGC TTTCATATTT CTGCTGATTG
GGAGAATAAT GTTGAATTAT TGTTTCGCTC AGAAGTACTC ATGTTTTTGC TGACCTTACA TGAATGAATT GTTTTCATTC
CTGTGTCCAT GATTTTCATT AACAAGGCAG GGCGTGTTGT ATGCTACATA TTTTGTGACT ATTTTATCTT TTGAAAGGGT
GCGAGAGTTC AGGAGAAATG TGAATTATGT TCATCTTGGC TTTTCCTTAA TATGCAGAAG GTGTGCATGC TGGATTCAGG
GCTGCTTGCG TTGCTTGTGT TGCCAGTGCT GTGCCTACTG TACGTAACCT TTTTCAGATA CAATTCTACA TTTTTTTCGT
TTGTAATTAT GTCAGAAAAA ATCAGTTAAG CAATGTTCGT GTTGTCTTTT AGGTACAACT TTTACCTCAT AACAACTACG
TCCTATATTC CACCGGTTTG GTGTTTATGT CTGCTTTTGA AACCTTTTTC TGAGTTTCTG AATTATGAAA AATAATTCAA
AGATGAAGAA GAAATCAGGC AAACTTTAGA CCCTTGCATA TTTATGATGA AAATATATAA TGTTTAAAGA CAATCTTAAA
TATTGTCGGA TTTCACTATT ATATCATTAT TGGCCACTTC TGTTCACATA TTGGTATGTT GATTTACTAA GCTTTACTTT
TTAATATTGG AATTTTCAAA TTTGCAGTTG ACTGCAGTTC GTGTGATCCC ATGGGCAAAG GCAAACCTCA ATTATACTGC
TCAGGCACTC ATAATATCAG CTGGTATGAT CTCAACTTAC AAAAACCAAA TGATTAATTC TAGATGATGC TATTAGATTT
TTCATATAAA AAGAAATCCT TTTGTTAAGA TGTGCATGGT TATTTGAAAG GGTAAACCCT ATGTAGTTCG ATAGGTGTTT
TTGTTGTTCT CTTGTTAGAA TTGATGTTTT ACCTCAGCCA TCTATGTTGA TCTTTAATGT AAACTTTTAT TATGGGGTTA
CTATAGTGAA ACCTTAATTC TAATTGAAGA ACAATACTGA AAAAATCTAA GGAAGTGTAT CTGAGTTTTC TCCAATAGGG
AATGGGCTTT AAAGCAAGAA GCAATTGCTT CTGATGCCAT TGTATTGACA AGTCCATGTA ATAATGGTGT ATGCAGTTAA
TGTATTAGGC TTGCCACAGT TTCAAAATTC AATGTAACAG GAACTCAGCT AATCTTTTTG CTGCTGGTCC ACTTGTAAAT
TAGTTGCTTG ATTTCTTTTA CCTTTAGTTT GACTATATTT GCAAATTGTT ATCGTGTTTA ACATCTGACG GTGGTTGGTG
AACAGCATCC ATCGCTGCAT ACTTCATCAC TGCTGATAAA ACTATCTTGG AGTGTGCAAG GAAAAATGCC CAGCTTGAAG
ATGCTTTGGT ACACAATCAA CAATAGACGT TTCTTACGAA CTGCAAGAAC CCGTCGTTGT TATACACTCA ACAGGACTAT
TGCAAAGGCG TATATTATTA AAGAAAATGT TTTTGTCTTG TGAATTTGAC AGTCATTTGA AATTGCAACT CACTTGCGGC
TTCAGAAGTA AAAATGTTAA GCTATGTTGA CTTTTGTTGT TTTTCCATCT TTCGTTAAAT AAATTTAATG CATAAACTTC
GAAGTTCCAT GAGCTGTTCC ACAATTAAGC CTGATTCTAA TTTCATGTTA TAACCACCCT GTTCCACAAA TTCATTGCGC
GCCTTTGTCT GTCTCCTGTG GTTTATAGCT TCACATTTAT ACTGATGTTT TAAAAAATTA GCGTAGCCAC CAGAGAGGCA
AAAATCCTTC TTACCAAACA AACCTA

>Vigan.03G185400.01
ATGACATACG GCAACTCTGA TAGACACGAA CATTCTGCGT ACATACATAT AGTATATTAT AGTATACGGT AATAATAATA
ATTAGCCACC GGGTTTCGGT TCAGAGAACC TGCTACAAAA GAAGAAAAGT TTGTTGAAGA GAGCCAACCA CAACAAAAAC
AATGGGTATT CCGTCGGAAC TTCGGGAAAT CTTCTTACCC AACAAAAAAG ATGTCTTTAT TGCTTCTCCC GCAGAGGATA
GGAGGGTTTT GAGGACCAAA CAATGCACTG ATGAAGGTGT GCATGCTGGA TTCAGGGCTG CTTGCGTTGC TTGTGTTGCC
AGTGCTGTGC CTACTTTGAC TGCAGTTCGT GTGATCCCAT GGGCAAAGGC AAACCTCAAT TATACTGCTC AGGCACTCAT
AATATCAGCT GCATCCATCG CTGCATACTT CATCACTGCT GATAAAACTA TCTTGGAGTG TGCAAGGAAA AATGCCCAGC
TTGAAGATGC TTTGGTACAC AATCAACAAT AGACGTTTCT TACGAACTGC AAGAACCCGT CGTTGTTATA CACTCAACAG
GACTATTGCA AAGGCGTATA TTATTAAAGA AAATGTTTTT GTCTTGTGAA TTTGACAGTC ATTTGAAATT GCAACTCACT
TGCGGCTTCA GAAGTAAAAA TGTTAAGCTA TGTTGACTTT TGTTGTTTTT CCATCTTTCG TTAAATAAAT TTAATGCATA
AACTTCGAAG TTCCATGAGC TGTTCCACAA TTAAGCCTGA TTCTAATTTC ATGTTATAAC CACCCTGTTC CACAAATTCA
TTGCGCGCCT TTGTCTGTCT CCTGTGGTTT ATAGCTTCAC ATTTATACTG ATGTTTTAAA AAATTAGCGT AGCCACCAGA
GAGGCAAAAA TCCTTCTTAC CAAACAAACC TA

>Vigan.03G185400.01
ATGGGTATTC CGTCGGAACT TCGGGAAATC TTCTTACCCA ACAAAAAAGA TGTCTTTATT GCTTCTCCCG CAGAGGATAG
GAGGGTTTTG AGGACCAAAC AATGCACTGA TGAAGGTGTG CATGCTGGAT TCAGGGCTGC TTGCGTTGCT TGTGTTGCCA
GTGCTGTGCC TACTTTGACT GCAGTTCGTG TGATCCCATG GGCAAAGGCA AACCTCAATT ATACTGCTCA GGCACTCATA
ATATCAGCTG CATCCATCGC TGCATACTTC ATCACTGCTG ATAAAACTAT CTTGGAGTGT GCAAGGAAAA ATGCCCAGCT
TGAAGATGCT TTGGTACACA ATCAACAATA G

>Vigan.03G185400.01
MGIPSELREI FLPNKKDVFI ASPAEDRRVL RTKQCTDEGV HAGFRAACVA CVASAVPTLT AVRVIPWAKA NLNYTAQALI
ISAASIAAYF ITADKTILEC ARKNAQLEDA LVHNQQ*