GBrowse Details

Vigan.03G177400.01

Basic Information:
Name: Vigan.03G177400.01
Multiple alignment
Variant Information
Position: Chr03:26498865..26501888 (+ strand)
Length: 3024
Functional Information:
Description: Similar to Uncharacterized protein. [V7B850, Phaseolus vulgaris]
GO: Molecular Function: protein domain specific binding (GO:0019904)
InterPro: 14-3-3 protein (IPR000308)
14-3-3 protein, conserved site (IPR023409)
14-3-3 domain (IPR023410)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:228.56,243.96,208.14,141.39,295.91,268.24,225.82,116.10
Automatic updates:
Name: NM_001252761 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 14-3-3 protein SGF14g (SGF14G), mRNA.
PubMed ID: 21120521 NCBI(pubmed)
18927222 NCBI(pubmed)
Status: Known Variant
Name: NM_001354043 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max 14-3-3 protein SGF14k (SGF14K), mRNA.
PubMed ID: 21120521 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:26498865..26499177 (+ strand)
Length: 313
Type: five_prime_UTR
Position: Chr03:26499178..26499663 (+ strand)
Length: 486
Type: CDS
Position: Chr03:26500574..26500696 (+ strand)
Length: 123
Type: CDS
Position: Chr03:26501023..26501139 (+ strand)
Length: 117
Type: CDS
Position: Chr03:26501241..26501300 (+ strand)
Length: 60
Type: CDS
Position: Chr03:26501301..26501888 (+ strand)
Length: 588
Type: three_prime_UTR

>Vigan.03G177400.01 class=Sequence position=Chr03:26498865..26501888 (+ strand)
AAAAAAAATT GATAAAATGA AGAGGTTAAA AATAGAAAAG AGAGAGAGAG AGAGAGGGAG TGAGGGCTAT TTTTGTCATG
GGAATGAATG AATGGGATCC AAAAGTAAAA ATAAGTCCCT CGAAAACGCA ATCATGGGTG GCAGAAACGG AAGCACAGCA
AGAACCAATC CCAACCTTTC GGTTCTCCCA CAAATAAAAT AGTTAACAAA ACCCACTATT TGTTGCTCCC AATCCCTCTC
ACGCACTTTC CCTGCCTCTC TTTCTCTCTC CAACATCTCT CTCTTTCTCT CACATCCCTA ATCAGATCCC GCAATGGCCA
GCGCTCCTTC TCCACGCGAA GAGTTCGTGT ACATGGCCAA GCTGGCGGAG CAAGCCGAGC GCTACGAGGA GATGGTGGAG
TTCATGGAGA AGGTCTCTGC CGCCGCCGAG AACGAGGAAC TCTCTGTCGA GGAGCGCAAC CTCCTCTCCG TCGCTTACAA
GAACGTCATC GGCGCCAGAC GTGCCTCCTG GCGCATCATC TCCTCCATCG AGCAGAAGGA GGAGAGCCGA GGCAACGAGG
ACCACGTCGC CGTTATCCGC GACTACCGAT CCAAGATCGA GAGCGAACTC TCCAACATCT GCGACGGAAT CCTCAAGCTC
CTTGACTCGC GCCTCGTTCC CTCCGCTGCC TCTGGTGACT CCAAGGTCTT TTACCTCAAA ATGAAGGGCG ACTACCACAG
GTACCTCGCC GAGTTCAAGA CCGGTGGCGA CCGCAAAGAG GCCGCAGAGA GCACGCTCTC CGCCTACAAA TCTGCACAGG
TTTTCGATAT TTTTTCATAT TCTAATTTTC GTGTTATAGA TCTGTTTGCT TTACTCGCCA GATTCGTGAT TTGATTGATT
GTGAGTAAAT TATTCGTATG CGCGCGTGGA CGCTCACGCG CGCACCATTT GGTCAATTTT TTTGGTTAGA ATAGGGGAAT
CTAATACGGT TAAAGTGACT TTTTGTAGCT AAGCAGGTTT AAATTTGGAA ATCACTTGTT TAGAATCTTA AATATTAAAT
TGTTAAATGA TGTTTGGTCT GTGTTTGATC TACGATTCAA AATATGTTAT TATGTTTCAA ATTTTATCTT GGAATTGTGG
AATCGTTACA GAAAGCGATG ATGAAATTTG GAATATACTT TTCTGAAATA GAAAGGGCTA AGAGGTTGAG TAGTGTGACA
GTGGGTAGAA TAATATCGCT GGGACAGATT TTAATATAAC TCTGATTTAA GTCAAACTTA ATTTTGCAAA ACTTTACAAA
TAGTTTTCTA AAGAGAAGAT TTATATGTAT TTATATTGAT CTTTATTATA TAAAAAACTT TCAACAGAAA GTATTAAATC
ATTGAATCGT TTTTCCTGGC GAATTTGATC TACGGTTCAA AACTTTTGGT TGTCTGTTGC AAATTTTAGG TCTAGAAGAC
TCTGGGTTCT CTGTGGTAAC GGTGGTTTTG GAAACGAAGT AATTGAAATT CAGAAGTTAT TTGTCCGCAA TTGTTAATCT
TAAGTAATTG AACAATTTTT GCGTGCGTGT TTGATTTACA GTGACTTCCA TATTGTAACG TGAAATAGAT TTATAGCATT
GTAAGAAGAT TTTCTTTTGT TTGAACGGTT TGTTTGATTA TATTTCGAAC TGTATATTCC GCTTTTTTGT TTTTTCTGAT
GTTTTGGTTT AACTGTATTG TGTGTATAGG ACATTGCAAA CTCTGAGCTG CCTCCAACTC ACCCTATTAG GCTTGGTCTT
GCTCTGAACT TCTCTGTGTT TTACTATGAG ATTCTTAATT CTCCTGATCG GGCTTGCAGC CTTGCAAAAC AGGTTAGTGT
TAAGAAAAAC TTGTCTTTTT ATTTTAATAA ATGACTATTC GATTACATAA GATATTTTTG CGGTAAAAAC AAAACAATGG
CTGGACGTGG TGAAATATTC GAAGTTAGCG GTTAATGAAT TGGAATAATA TATTCATTTC ATTGCAACAA CAGCATACTA
TAGTTTCAGT AATGTCTAAG TAACCTTGAT GTTCGATTCT GATGACTAAT TAAAATCATA AAATGTTAAA TGATCGTAAC
TCGTGATCTT TGGTTGGCCT TCTTATGTAA AAGGTGTATG TAATCGTGAA CATTTCTGTT GATTTTGAAA TTCACTAGGC
TTTTGACGAG GCAATTGCTG AATTGGATAC ACTGGGCGAG GAGTCATACA AGGATAGCAC TTTGATCATG CAACTTCTTC
GTGATAACCT TACCCTCTGG ACCTCTGACA TGCAGGTATG ACTTTTGGGA TTTCCAACAT TTGTAGAGTA ATATCACTTT
ATTCTCTTCA GAGAATCTAT ACATTGATTT CGCTGTTTAT TTTGTTGGGT TTTCAGGATG ACGGTGCAGA TGAAATTAAA
GAAGCCGCGC CTAAAGGTGA CGGGGAACAA AATTAAACAA ATCATACCGC TAATTAGTCG TTGAACTTCC CTTCTATAAT
GCTTTCAAAG GGAGAAAGTG CCGATTGCTA ATCTCGATGT TACTGAGATT TTAGGCATTC CATGGTCTTT GTTATGAATT
GTGGATGCAG TGGGCTATTT TAGTTTGTCC TTCCATTTGT ACGCGTTTCT GAATTGCCTA CTTTCTTAAT GACACTGAAA
TTTCCATTAT ATGCTCGTAG AATATCAAGA TAATATTCTC TTTGGCAAAC ATGATGTTGC TCATTAATTT AGGATATGAA
ATTGTGACAC CTTTATTTGT TTTATTCGAA AGCCTCGGAA TCATAAATTT GACAGATTTT AACGTGCTTT TGTTTCGTGT
GAGGATTGCC AACTTCAGTC TGTTTGGGTC TGTTTTAATT GTTCTTGAGA TGAGAGCTAT TTTTTCGCAA TGCACATGGG
TTGATCTCAC GGATGTGTTT TTTATATGCA GAATATTTTG TAACTTTCTA TTGCCTGTTT GATTCCTTGT TTTTAGTGGC
TGAATAAATT AGATGTAGTG AAGATACGTT AATTATAGGA ACTTCGGAAT TTTCATAAAT AATG

>Vigan.03G177400.01
AAAAAAAATT GATAAAATGA AGAGGTTAAA AATAGAAAAG AGAGAGAGAG AGAGAGGGAG TGAGGGCTAT TTTTGTCATG
GGAATGAATG AATGGGATCC AAAAGTAAAA ATAAGTCCCT CGAAAACGCA ATCATGGGTG GCAGAAACGG AAGCACAGCA
AGAACCAATC CCAACCTTTC GGTTCTCCCA CAAATAAAAT AGTTAACAAA ACCCACTATT TGTTGCTCCC AATCCCTCTC
ACGCACTTTC CCTGCCTCTC TTTCTCTCTC CAACATCTCT CTCTTTCTCT CACATCCCTA ATCAGATCCC GCAATGGCCA
GCGCTCCTTC TCCACGCGAA GAGTTCGTGT ACATGGCCAA GCTGGCGGAG CAAGCCGAGC GCTACGAGGA GATGGTGGAG
TTCATGGAGA AGGTCTCTGC CGCCGCCGAG AACGAGGAAC TCTCTGTCGA GGAGCGCAAC CTCCTCTCCG TCGCTTACAA
GAACGTCATC GGCGCCAGAC GTGCCTCCTG GCGCATCATC TCCTCCATCG AGCAGAAGGA GGAGAGCCGA GGCAACGAGG
ACCACGTCGC CGTTATCCGC GACTACCGAT CCAAGATCGA GAGCGAACTC TCCAACATCT GCGACGGAAT CCTCAAGCTC
CTTGACTCGC GCCTCGTTCC CTCCGCTGCC TCTGGTGACT CCAAGGTCTT TTACCTCAAA ATGAAGGGCG ACTACCACAG
GTACCTCGCC GAGTTCAAGA CCGGTGGCGA CCGCAAAGAG GCCGCAGAGA GCACGCTCTC CGCCTACAAA TCTGCACAGG
ACATTGCAAA CTCTGAGCTG CCTCCAACTC ACCCTATTAG GCTTGGTCTT GCTCTGAACT TCTCTGTGTT TTACTATGAG
ATTCTTAATT CTCCTGATCG GGCTTGCAGC CTTGCAAAAC AGGCTTTTGA CGAGGCAATT GCTGAATTGG ATACACTGGG
CGAGGAGTCA TACAAGGATA GCACTTTGAT CATGCAACTT CTTCGTGATA ACCTTACCCT CTGGACCTCT GACATGCAGG
ATGACGGTGC AGATGAAATT AAAGAAGCCG CGCCTAAAGG TGACGGGGAA CAAAATTAAA CAAATCATAC CGCTAATTAG
TCGTTGAACT TCCCTTCTAT AATGCTTTCA AAGGGAGAAA GTGCCGATTG CTAATCTCGA TGTTACTGAG ATTTTAGGCA
TTCCATGGTC TTTGTTATGA ATTGTGGATG CAGTGGGCTA TTTTAGTTTG TCCTTCCATT TGTACGCGTT TCTGAATTGC
CTACTTTCTT AATGACACTG AAATTTCCAT TATATGCTCG TAGAATATCA AGATAATATT CTCTTTGGCA AACATGATGT
TGCTCATTAA TTTAGGATAT GAAATTGTGA CACCTTTATT TGTTTTATTC GAAAGCCTCG GAATCATAAA TTTGACAGAT
TTTAACGTGC TTTTGTTTCG TGTGAGGATT GCCAACTTCA GTCTGTTTGG GTCTGTTTTA ATTGTTCTTG AGATGAGAGC
TATTTTTTCG CAATGCACAT GGGTTGATCT CACGGATGTG TTTTTTATAT GCAGAATATT TTGTAACTTT CTATTGCCTG
TTTGATTCCT TGTTTTTAGT GGCTGAATAA ATTAGATGTA GTGAAGATAC GTTAATTATA GGAACTTCGG AATTTTCATA
AATAATG

>Vigan.03G177400.01
ATGGCCAGCG CTCCTTCTCC ACGCGAAGAG TTCGTGTACA TGGCCAAGCT GGCGGAGCAA GCCGAGCGCT ACGAGGAGAT
GGTGGAGTTC ATGGAGAAGG TCTCTGCCGC CGCCGAGAAC GAGGAACTCT CTGTCGAGGA GCGCAACCTC CTCTCCGTCG
CTTACAAGAA CGTCATCGGC GCCAGACGTG CCTCCTGGCG CATCATCTCC TCCATCGAGC AGAAGGAGGA GAGCCGAGGC
AACGAGGACC ACGTCGCCGT TATCCGCGAC TACCGATCCA AGATCGAGAG CGAACTCTCC AACATCTGCG ACGGAATCCT
CAAGCTCCTT GACTCGCGCC TCGTTCCCTC CGCTGCCTCT GGTGACTCCA AGGTCTTTTA CCTCAAAATG AAGGGCGACT
ACCACAGGTA CCTCGCCGAG TTCAAGACCG GTGGCGACCG CAAAGAGGCC GCAGAGAGCA CGCTCTCCGC CTACAAATCT
GCACAGGACA TTGCAAACTC TGAGCTGCCT CCAACTCACC CTATTAGGCT TGGTCTTGCT CTGAACTTCT CTGTGTTTTA
CTATGAGATT CTTAATTCTC CTGATCGGGC TTGCAGCCTT GCAAAACAGG CTTTTGACGA GGCAATTGCT GAATTGGATA
CACTGGGCGA GGAGTCATAC AAGGATAGCA CTTTGATCAT GCAACTTCTT CGTGATAACC TTACCCTCTG GACCTCTGAC
ATGCAGGATG ACGGTGCAGA TGAAATTAAA GAAGCCGCGC CTAAAGGTGA CGGGGAACAA AATTAA

>Vigan.03G177400.01
MASAPSPREE FVYMAKLAEQ AERYEEMVEF MEKVSAAAEN EELSVEERNL LSVAYKNVIG ARRASWRIIS SIEQKEESRG
NEDHVAVIRD YRSKIESELS NICDGILKLL DSRLVPSAAS GDSKVFYLKM KGDYHRYLAE FKTGGDRKEA AESTLSAYKS
AQDIANSELP PTHPIRLGLA LNFSVFYYEI LNSPDRACSL AKQAFDEAIA ELDTLGEESY KDSTLIMQLL RDNLTLWTSD
MQDDGADEIK EAAPKGDGEQ N*