GBrowse Details

Vigan.03G137000.01

Basic Information:
Name: Vigan.03G137000.01
Multiple alignment
Variant Information
Position: Chr03:15814464..15818027 (- strand)
Length: 3564
Functional Information:
Description: Similar to hydroxyacylglutathione hydrolase cytoplasmic-like. [XP_004490514.1, Cicer arietinum]
GO: Biological Process: glutathione biosynthetic process (GO:0006750)
Molecular Function: hydroxyacylglutathione hydrolase activity (GO:0004416)
Molecular Function: zinc ion binding (GO:0008270)
Molecular Function: hydrolase activity (GO:0016787)
InterPro: Beta-lactamase-like (IPR001279)
Hydroxyacylglutathione hydrolase (IPR017782)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:101.53,76.15,38.67,42.74,51.93,52.64,64.48,32.74
Arabidopsis thaliana homolog: AT3G10850.1
Automatic updates:
Name: NM_001248436 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100527131 (LOC100527131), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:15814464..15814639 (- strand)
Length: 176
Type: three_prime_UTR
Position: Chr03:15814640..15814714 (- strand)
Length: 75
Type: CDS
Position: Chr03:15814973..15815149 (- strand)
Length: 177
Type: CDS
Position: Chr03:15816089..15816202 (- strand)
Length: 114
Type: CDS
Position: Chr03:15816416..15816494 (- strand)
Length: 79
Type: CDS
Position: Chr03:15817336..15817497 (- strand)
Length: 162
Type: CDS
Position: Chr03:15817580..15817702 (- strand)
Length: 123
Type: CDS
Position: Chr03:15817780..15817826 (- strand)
Length: 47
Type: CDS
Position: Chr03:15817827..15818027 (- strand)
Length: 201
Type: five_prime_UTR

>Vigan.03G137000.01 class=Sequence position=Chr03:15814464..15818027 (- strand)
CAATAAGGTT CATGTGATAT CTTTAACACA ATCGTTCTAA CAAGAGTCCT AATCAATAAA ATTGAATTCC ATTGATTTTA
TGATAAAGTA TATATATAAA CATTATGGAA ATGAAAATTT TAGTCCATTT ATAAATCCGT CGCCGCTAGA TACTCGAAAG
GAGTCGAATT TTGGAAGAGT GTTTGAATCG GAAAGGGAAA GATGAAAATC CAACACATAC CATGTCTCGA AGACAATTAT
TCTTATCTGT GGGAATCTAA TCTAACATTC ATCCATTCAT TTCTCTTCTC TCTTTGATTT TGCTGAACCA ATCTGAGTGG
CGCAGGATCG TCGATGAGAG CACCAAGGAA GCCGCGGCGG TGGACCCAGT CGAGCCGGAG AAGATTCTCG AAGCTGCCAA
CTCGTATGGT GTCACTCTCA AACTCGTCCT CACCACCCAC CATCACTGGT ATGATGTACT GAGTTGTTTT TATCTTTTTC
TGACATGTTC CCTATGATGT TTTGTTTTAC CGTTTATTAT TGTGTGACAG GGATCATGCT GGTGGAAACG AGAAGATAAA
ACAACTGGTG CCTGGAATCA AGGTCTATGG TGGTTCCATC GATAACGTGA AGGGTTGCAC CGACAAGGTT GAAAACGGTG
ATAAGGTCTC CCTTGGAGCT GACGTCACTA TATTGGCCCT TCATACACCT TGGTATGCCA TGCTGTGTTA TGTTATGTTA
TTGCTAACTC AACTTTTCAA GTTTTTCCAT CTGTGCACTA CACTATAGAG TATGGGTTGG AATTGTAACT GTTGGGTCAT
GTTTGGATGA AAATAAACAG GTGAAATGAT TTAAGCTTCT CTAACAACTT GAAAATAGTT TATGTATAAT CTAACTTTTG
AAAGCATTCT CTTATTTCAT TTAACCAGAT ACCAATTTTA ACCTTTTCAA GTGAAATTAA ATTAGTATGG TTGAACACAA
CTTAGAAGTG CTTTGGAGAA CTTTTATACG GGAAATTTGA AGATTATTTT TGGAGAAGGT CTCAAAAGCA CTCATAGAGT
TTGTATCCAA AACGTTTTAA CTTGAACCGA AACAGGTTTG AACAAGTCAT AAATTTGTTT AGTAGTTGTT AGTACGAGTA
TAGTGTTTGA ATACCAAGAA TTGTTAGCTG GTCAGGATGA ATACTATAGT CTTTGACACC CACAGCTATA ACTTTTTGTA
ATGTATTTCT CTAGCCAGAA AAGTCTGCAT AAAAGAATCA GTTTTGTAAT GCGTGCTGAA CTTTTGCCAA TTATTCCCAT
CCCCTGTTAG AGGGCTATAA TTCTGCTTAT CTGATGATTA AACAAATGAT GTGCCAAATT GGGAGAAAAT ATACCATGAA
GGCATTGCCA TACCTCATTG GCCTTCTTAT TTTTATTTTA TTGTTAATTT TTTATTGCTG CGTTATCAGT TCTTTTGGTG
TATTTCTTGA TGTTTGCTGT AGTGATGATT CTCTCTTTTT TTATTCATAT TTACCTCTCT TGTTAACCTA GGCTATATTT
GTAATTTGCT CAGTCACACA AAAGGCCACA TAAGTTACTA TGTTACTGGC AAAGAGGATG AGCATCCGGC TGTTTTTACT
GGAGATACAT TGGTAAGATG ATTGATCAAT CTTTTCCATA TCAGAAAAAA ATGTAGTTAT TTTGGAAAAC ATGTAATAAA
CTTGTTCTTA AAGCCGTCAC AAGTGCTTGA AGTCAAGGTA TGTGACTTTT ATTTGGTTCT CTCTTTTAAA ACTTTTATGG
ATATGAATTT TGAAGAGGCT CTTCTTTCAA ATCTCTACAT TTGCTGTCTT ATTGCTGGTT TACAGTTTAT TGCTAGTTGT
GGGAAATTTT TTGAGGGAAC TGCTGAACAG ATGTATCAGT CTCTCAATGT AACACTAGGT TCATTGCCAA AGACAACTCG
AGTATACTGT GGCCATGAGG TAAATCATAC TGAAGTCACC ATCTATACTA AAAAAAAATT ATTATGGGGA GTGTCAATTT
TGTTTATCTA TATAGGTAGT GTCAATAATG ATCAATCTTC TTATAATTTA AATGAGGAAT GGAATTGATC CAAAAGACTT
CTTAAACAGT CAGTTCACTC ATGATTTTTA ATGCTAAATA CTTCTAATTT GATTAATGGA GAAAGGGGGT TGGGGGATGA
TGCAAACATT TAAAAGTATT AAATAATACA GACTAATCTT CTTGGTCCAG TTCACACACG TTAATATTAT GTAAAAACTG
TATTATGGGA AATGTACACC AATTTTTGCG GCATATAGTA GTCAACCTGA TATGAATATA ATGGAGTACG AGGTTCAAAC
GAATTGATAC TCAATTATTG TCACAAATTT TGTGCTAAAA TTAGGTCTTT AGGTATTCAT GAATACTGTT TCCTAACCTT
TTGTTATGCT AGAGTCTGTG TTAGTCCATC GAAATGTCTA GATTGATAAA TCATATTTTG GTTCGGAGTT AGCATTCTGC
CACAGTAACC CTTGAGCAAG TAAATCAATA CATCCTTCAT TCTTTAGAAC ACAATTCTAT GTTCTTTTCT GAAAAAATAA
AATATAATTG GTTTTTAAAT GTATATATTC AGCTACTCAG ATGTGAAGTT ATGATTTGGA ATGAGTGAAT TGCTTTAGAT
AATCTGTAGT GACTGTTCAT AAGAACTCGT TTGTTTGGAA TTGATCGTGC ACTGTTTATC TTGCAAAACT ATGACTTGCA
TTAAATAAAA AATGCAACTT TGAGGCATAA GGTGAGGAGG GGGAAATTTT AGATTGCTTT ACTTTTGGCA TATAAAAGCC
TAAATTCTCA GTGGCCTATT TCTTATATGC TGTTTCCACT TATAATCACT AGTAAGAGTG TGAAGTTTTT ATCTCCAGTA
TTCAGTGAAG AACTTGCAAT TTGCTCTGAC ACTTGAGCCA GACAATTCGA GGACACAACA GAAATTAACC TGGGCTCAGA
ATCAGAGACA AGCTGGTCAA GCAACAATTC CCTCAACCAT TGAGGATGAG TTGGAGACCA ATCCCTTTAT GAGGGTTGAT
CTACCTGAGA TCCAGGTTTG ACACCTCTCC ACCCTCTTTT CAAAGTGGGA ACCAAAATAT ATTATTTCCT GTTGATTAGA
GGGTAGAATG AAATATAGAA TCAGAAAAAG TTTCAGGAGT TTATTGGTGC TTTCTACAAT CAAACTGAAA TTCTAACATA
GTTAGAAAAG AAGCTGTTAT TTGTGCAGTT TTTATTTATT TTTTTCTTGG GTAAAAAATA TAGTGACTTA CAAAAGTTGA
ACCTGAAGCT TTTCTTAAAC TGAAAATTTT CAGGAGAGGG TGGGCTGTAA GTCACCTGTT GAAGCATTAG GAGAGATAAG
GAAGCGGAAA GACAACTGGA GAGGCTAATG AAACTAGCAT TCTCATTTGT TCATACTTCA ATTTCCTGTT CTGTTTTATA
ATATGAATAA GGCCTTTATG TAGATACTGT AACCGTTTGA TTTACCTGAA ACTGAAATGA GAGTCAGAGG CTTGTCAAGC
TAGGGGCACG GATTCTGATT AGCAATGTCG CCTATATGCA TATT

>Vigan.03G137000.01
CAATAAGGTT CATGTGATAT CTTTAACACA ATCGTTCTAA CAAGAGTCCT AATCAATAAA ATTGAATTCC ATTGATTTTA
TGATAAAGTA TATATATAAA CATTATGGAA ATGAAAATTT TAGTCCATTT ATAAATCCGT CGCCGCTAGA TACTCGAAAG
GAGTCGAATT TTGGAAGAGT GTTTGAATCG GAAAGGGAAA GATGAAAATC CAACACATAC CATGTCTCGA AGACAATTAT
TCTTATCTGA TCGTCGATGA GAGCACCAAG GAAGCCGCGG CGGTGGACCC AGTCGAGCCG GAGAAGATTC TCGAAGCTGC
CAACTCGTAT GGTGTCACTC TCAAACTCGT CCTCACCACC CACCATCACT GGGATCATGC TGGTGGAAAC GAGAAGATAA
AACAACTGGT GCCTGGAATC AAGGTCTATG GTGGTTCCAT CGATAACGTG AAGGGTTGCA CCGACAAGGT TGAAAACGGT
GATAAGGTCT CCCTTGGAGC TGACGTCACT ATATTGGCCC TTCATACACC TTGTCACACA AAAGGCCACA TAAGTTACTA
TGTTACTGGC AAAGAGGATG AGCATCCGGC TGTTTTTACT GGAGATACAT TGTTTATTGC TAGTTGTGGG AAATTTTTTG
AGGGAACTGC TGAACAGATG TATCAGTCTC TCAATGTAAC ACTAGGTTCA TTGCCAAAGA CAACTCGAGT ATACTGTGGC
CATGAGTATT CAGTGAAGAA CTTGCAATTT GCTCTGACAC TTGAGCCAGA CAATTCGAGG ACACAACAGA AATTAACCTG
GGCTCAGAAT CAGAGACAAG CTGGTCAAGC AACAATTCCC TCAACCATTG AGGATGAGTT GGAGACCAAT CCCTTTATGA
GGGTTGATCT ACCTGAGATC CAGGAGAGGG TGGGCTGTAA GTCACCTGTT GAAGCATTAG GAGAGATAAG GAAGCGGAAA
GACAACTGGA GAGGCTAATG AAACTAGCAT TCTCATTTGT TCATACTTCA ATTTCCTGTT CTGTTTTATA ATATGAATAA
GGCCTTTATG TAGATACTGT AACCGTTTGA TTTACCTGAA ACTGAAATGA GAGTCAGAGG CTTGTCAAGC TAGGGGCACG
GATTCTGATT AGCAATGTCG CCTATATGCA TATT

>Vigan.03G137000.01
ATGAAAATCC AACACATACC ATGTCTCGAA GACAATTATT CTTATCTGAT CGTCGATGAG AGCACCAAGG AAGCCGCGGC
GGTGGACCCA GTCGAGCCGG AGAAGATTCT CGAAGCTGCC AACTCGTATG GTGTCACTCT CAAACTCGTC CTCACCACCC
ACCATCACTG GGATCATGCT GGTGGAAACG AGAAGATAAA ACAACTGGTG CCTGGAATCA AGGTCTATGG TGGTTCCATC
GATAACGTGA AGGGTTGCAC CGACAAGGTT GAAAACGGTG ATAAGGTCTC CCTTGGAGCT GACGTCACTA TATTGGCCCT
TCATACACCT TGTCACACAA AAGGCCACAT AAGTTACTAT GTTACTGGCA AAGAGGATGA GCATCCGGCT GTTTTTACTG
GAGATACATT GTTTATTGCT AGTTGTGGGA AATTTTTTGA GGGAACTGCT GAACAGATGT ATCAGTCTCT CAATGTAACA
CTAGGTTCAT TGCCAAAGAC AACTCGAGTA TACTGTGGCC ATGAGTATTC AGTGAAGAAC TTGCAATTTG CTCTGACACT
TGAGCCAGAC AATTCGAGGA CACAACAGAA ATTAACCTGG GCTCAGAATC AGAGACAAGC TGGTCAAGCA ACAATTCCCT
CAACCATTGA GGATGAGTTG GAGACCAATC CCTTTATGAG GGTTGATCTA CCTGAGATCC AGGAGAGGGT GGGCTGTAAG
TCACCTGTTG AAGCATTAGG AGAGATAAGG AAGCGGAAAG ACAACTGGAG AGGCTAA

>Vigan.03G137000.01
MKIQHIPCLE DNYSYLIVDE STKEAAAVDP VEPEKILEAA NSYGVTLKLV LTTHHHWDHA GGNEKIKQLV PGIKVYGGSI
DNVKGCTDKV ENGDKVSLGA DVTILALHTP CHTKGHISYY VTGKEDEHPA VFTGDTLFIA SCGKFFEGTA EQMYQSLNVT
LGSLPKTTRV YCGHEYSVKN LQFALTLEPD NSRTQQKLTW AQNQRQAGQA TIPSTIEDEL ETNPFMRVDL PEIQERVGCK
SPVEALGEIR KRKDNWRG*