GBrowse Details

Vigan.03G132500.01

Basic Information:
Name: Vigan.03G132500.01
Multiple alignment
Variant Information
Position: Chr03:15257509..15260138 (+ strand)
Length: 2630
Functional Information:
Description: Similar to Fructose-bisphosphate aldolase. [V7B6Z4, Phaseolus vulgaris]
GO: Biological Process: glycolysis (GO:0006096)
Molecular Function: catalytic activity (GO:0003824)
Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332)
InterPro: Fructose-bisphosphate aldolase, class-I (IPR000741)
Aldolase-type TIM barrel (IPR013785)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:178.08,505.23,670.74,137.30,1463.30,1738.25,953.04,436.82
Arabidopsis thaliana homolog: AT2G36460.1, AT3G52930.1, AT4G26520.1, AT4G26530.1, AT5G03690.1
Automatic updates:
Name: NM_001255438 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max fructose-bisphosphate aldolase, cytoplasmic isozyme-like (LOC100778363), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001278967 NCBI(nuccore)
Organism: Cicer arietinum
Description: Cicer arietinum Fructose-bisphosphate aldolase, cytoplasmic isozyme (ALDC), mRNA.
PubMed ID: -
Status: Known Variant
Name: NM_001354889 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative fructose-bisphosphate aldolase (LOC100783089), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:15257509..15257797 (+ strand)
Length: 289
Type: five_prime_UTR
Position: Chr03:15257798..15257825 (+ strand)
Length: 28
Type: CDS
Position: Chr03:15258288..15258515 (+ strand)
Length: 228
Type: CDS
Position: Chr03:15258980..15259800 (+ strand)
Length: 821
Type: CDS
Position: Chr03:15259801..15260138 (+ strand)
Length: 338
Type: three_prime_UTR

>Vigan.03G132500.01 class=Sequence position=Chr03:15257509..15260138 (+ strand)
ATAAATGTGG GCTGGTCAGT CCACCGAAAA CCAAAACCGC CATTCAATTT TGGTGTCCTT GATTCCAACG GCAGTCCACA
GAGACAAAAC ACACACTCAC CAACTTCGCG AGTGCGCTTC CTAAGACCCT AGTCCCTTTT GCTGTTGTCG TCTCCTCAAC
GCAACATCAT TATCACCATC ACTATTTAAA CCCCTCTTAA CCCTTTCCCT CGTGTTCACT TTTTCCCCAA TCTCACACCT
ACCTTGCTAT CTCCGTTCAA CTACCTCATC GTCTTCTTCC TCCTCGATCA TGTCTCACTT CAAGGGCAAG TACCATGGTA
CTTCTCTTCC TCTATGCACT CTCTTTTACT TCGATCTATT CTCATATCAG TCGTTTGTTT CTAGATCTAA CTGTTTCATA
TGTTTATCTA TTGATCCGTT TATTTTATGC CTTTTTTTGG ATTAATTTGA ACTTGTTTGC GTGGATTTAG TTCTGAGAGA
TTCAGATCTG GTTTTTCATT CGAATTTTTA TGGAAAGCTC GTGTGTGACT GTTTATATAT GTGCTCTTTC GAGGGATTTT
GTTGTGGTTT ATGAATTCTG CGTCGTTGTT GATGGTCTAA GGTTTCTTTG TCTCGGCTGC TGTTTTTACT CCACATCTTT
GTTCAAACGA TGAAGTTCAA CTTGTTTTCT GTTTATTTTG TTCATGTTTT GGATTTGTCT GTGATCGATG CTGTTTTGTT
TTTTGGAAGC TTGGAAATGA TGTCTGTGTG GTTCTGTTGA TTGATTATTT TGTTTGCAGA TGAGCTTATT GCAAATGCTG
CCTACATTGG CACTCCTGGA AAGGGTATTC TTGCTGCTGA TGAGTCGACA GGTACGATTG GTAAGCGTTT GGCCAGCATC
AATGTAGAGA ACGTTGAATC CAACAGGCGT GCTCTTAGGG AGCTTCTTTT CACTGCTCCT GGTGCTCTTC AATACCTCAG
TGGAGTCATC CTCTTTGAGG AAACCCTCTA CCAGAGCACA GCTTCAGGTA CTCAATTTTC AAGGATCTTA ATTTGTTTAG
TTTGTGATGA ACTGTGTTGC GTCAATCAAC GTCAATTTTC TGGTGATCAT TGACGGTGCA GAAAATTGTG GTCAAATGTG
GTCGACGCAG GCACAATTAT ACCACCGATT TTTTTGGGAA CTTGTTTTAA GTGCAAAGTT AAAAATAATT CAATATGTGC
TTTTGATGTT CATGTAATTA TGTAAATCTT TATTGTCTTA TTGAGAAATT CTAATTTTTA TTGGAGACGA AACTTTAAAT
AACTAAGGAA TTGCATTAAG TTTTGTTTTA TTTCGAAACC TTTAATTCAT GATTTTTTTC TTTTTCTTTT TCCCTTATGG
TTAGCCAATA TCCTTTTTTT TACTTGTGGA ATCGTCTTCA TTTGAATGAA GATGGATCAT AGTGTCATAT ATTTTACACT
ACTAACCTTG TTGTAAATGG ATTTTATGTA GGCAAGCCCT TTGTTCAGTT GTTGACGGAG GCTGGTGTGC TTCCTGGTAT
CAAGGTTGAC AAGGGCACCG TTGAGCTTGC TGGGACCGAT GGGGAAACCA CCACTCAGGG TCTGGATGGC CTTGGTCAGC
GTTGTGCCAA ATACTATGAA GCAGGTGCAC GATTTGCCAA ATGGCGTGCC GTGCTAAAGA TTGGTCCCAA CGAGCCATCA
GAGCTCTCCA TCCATGAGAA TGCCTATGGC TTGGCCAGAT ATGCTGTCAT ATGCCAGGAA AATGGGTTGG TTCCCATTGT
TGAACCCGAG ATCCTTGTTG ATGGACCTCA TGACATTCAC AAGTGTGCCG CTGTCACCGA GCGTGTCCTT GCAGCATGCT
ACAAGGCTTT GAATGATCAC CATGTTCTTC TTGAGGGAAC TCTGTTGAAG CCAAACATGG TGACACCTGG ATCTAAATCT
GCAAAGGTTG CTCCTGAGGT GGTTGCTGAA CACACTGTTA GAGCCCTGCA GCGAACTGTA CCTGCTGCAG TTCCTGCGGT
AGTTTTCTTG TCTGGTGGAC AGAGTGAGGA GGAGGCAACC CTCAACCTCA ATGCCATCAA CCTGGTTAAG GGGAAGAAGC
CATGGACACT CTCTTTCTCT TTTGGAAGGG CACTTCAACA GAGTACCCTT AAGGCATGGA GTGGAAAAGA TGAGAATGTG
AAGAAGGCTC AAGAAGCCTT ATTGGTAAGA GCCAAGGCTA ACTCAGAGGC AACTCTTGGA ACCTACAAGG GTGATTCAAA
GCTTGCTGAG GGTGCCTCAG AGAGTCTCCA TGTTGAGGAC TACAAGTACT GAGAAAAGTT GGTTCTCTTT ATCGAGACTA
GTGCGGGGTA GGAATCGGGT GACAACCGAA TTTCTTGCTA ATGAGTATTG TGGTTTGACT CCTCCCAGAA TAATCGTTTG
AAATTTTGCT TTTTGTTTTA GTGTTCTGCA ATATCATTTT AGTTTCAATG TATTGGTCAA ACATGCGCAA ATGGAGGGGA
TTTTAATTTG TTTTCTTGGA AGACACCACC TTTCTAAACG AAGCTTTGTG TTTACTTACA ATTCTCCCGC TGTTTTGTTT
TCGATGAAAT CAATAAATGG AAGGGTTTAT GATATTCACT TTCCTACCTT TTTAATTCAT CAATATTTTG 

>Vigan.03G132500.01
ATAAATGTGG GCTGGTCAGT CCACCGAAAA CCAAAACCGC CATTCAATTT TGGTGTCCTT GATTCCAACG GCAGTCCACA
GAGACAAAAC ACACACTCAC CAACTTCGCG AGTGCGCTTC CTAAGACCCT AGTCCCTTTT GCTGTTGTCG TCTCCTCAAC
GCAACATCAT TATCACCATC ACTATTTAAA CCCCTCTTAA CCCTTTCCCT CGTGTTCACT TTTTCCCCAA TCTCACACCT
ACCTTGCTAT CTCCGTTCAA CTACCTCATC GTCTTCTTCC TCCTCGATCA TGTCTCACTT CAAGGGCAAG TACCATGATG
AGCTTATTGC AAATGCTGCC TACATTGGCA CTCCTGGAAA GGGTATTCTT GCTGCTGATG AGTCGACAGG TACGATTGGT
AAGCGTTTGG CCAGCATCAA TGTAGAGAAC GTTGAATCCA ACAGGCGTGC TCTTAGGGAG CTTCTTTTCA CTGCTCCTGG
TGCTCTTCAA TACCTCAGTG GAGTCATCCT CTTTGAGGAA ACCCTCTACC AGAGCACAGC TTCAGGCAAG CCCTTTGTTC
AGTTGTTGAC GGAGGCTGGT GTGCTTCCTG GTATCAAGGT TGACAAGGGC ACCGTTGAGC TTGCTGGGAC CGATGGGGAA
ACCACCACTC AGGGTCTGGA TGGCCTTGGT CAGCGTTGTG CCAAATACTA TGAAGCAGGT GCACGATTTG CCAAATGGCG
TGCCGTGCTA AAGATTGGTC CCAACGAGCC ATCAGAGCTC TCCATCCATG AGAATGCCTA TGGCTTGGCC AGATATGCTG
TCATATGCCA GGAAAATGGG TTGGTTCCCA TTGTTGAACC CGAGATCCTT GTTGATGGAC CTCATGACAT TCACAAGTGT
GCCGCTGTCA CCGAGCGTGT CCTTGCAGCA TGCTACAAGG CTTTGAATGA TCACCATGTT CTTCTTGAGG GAACTCTGTT
GAAGCCAAAC ATGGTGACAC CTGGATCTAA ATCTGCAAAG GTTGCTCCTG AGGTGGTTGC TGAACACACT GTTAGAGCCC
TGCAGCGAAC TGTACCTGCT GCAGTTCCTG CGGTAGTTTT CTTGTCTGGT GGACAGAGTG AGGAGGAGGC AACCCTCAAC
CTCAATGCCA TCAACCTGGT TAAGGGGAAG AAGCCATGGA CACTCTCTTT CTCTTTTGGA AGGGCACTTC AACAGAGTAC
CCTTAAGGCA TGGAGTGGAA AAGATGAGAA TGTGAAGAAG GCTCAAGAAG CCTTATTGGT AAGAGCCAAG GCTAACTCAG
AGGCAACTCT TGGAACCTAC AAGGGTGATT CAAAGCTTGC TGAGGGTGCC TCAGAGAGTC TCCATGTTGA GGACTACAAG
TACTGAGAAA AGTTGGTTCT CTTTATCGAG ACTAGTGCGG GGTAGGAATC GGGTGACAAC CGAATTTCTT GCTAATGAGT
ATTGTGGTTT GACTCCTCCC AGAATAATCG TTTGAAATTT TGCTTTTTGT TTTAGTGTTC TGCAATATCA TTTTAGTTTC
AATGTATTGG TCAAACATGC GCAAATGGAG GGGATTTTAA TTTGTTTTCT TGGAAGACAC CACCTTTCTA AACGAAGCTT
TGTGTTTACT TACAATTCTC CCGCTGTTTT GTTTTCGATG AAATCAATAA ATGGAAGGGT TTATGATATT CACTTTCCTA
CCTTTTTAAT TCATCAATAT TTTG

>Vigan.03G132500.01
ATGTCTCACT TCAAGGGCAA GTACCATGAT GAGCTTATTG CAAATGCTGC CTACATTGGC ACTCCTGGAA AGGGTATTCT
TGCTGCTGAT GAGTCGACAG GTACGATTGG TAAGCGTTTG GCCAGCATCA ATGTAGAGAA CGTTGAATCC AACAGGCGTG
CTCTTAGGGA GCTTCTTTTC ACTGCTCCTG GTGCTCTTCA ATACCTCAGT GGAGTCATCC TCTTTGAGGA AACCCTCTAC
CAGAGCACAG CTTCAGGCAA GCCCTTTGTT CAGTTGTTGA CGGAGGCTGG TGTGCTTCCT GGTATCAAGG TTGACAAGGG
CACCGTTGAG CTTGCTGGGA CCGATGGGGA AACCACCACT CAGGGTCTGG ATGGCCTTGG TCAGCGTTGT GCCAAATACT
ATGAAGCAGG TGCACGATTT GCCAAATGGC GTGCCGTGCT AAAGATTGGT CCCAACGAGC CATCAGAGCT CTCCATCCAT
GAGAATGCCT ATGGCTTGGC CAGATATGCT GTCATATGCC AGGAAAATGG GTTGGTTCCC ATTGTTGAAC CCGAGATCCT
TGTTGATGGA CCTCATGACA TTCACAAGTG TGCCGCTGTC ACCGAGCGTG TCCTTGCAGC ATGCTACAAG GCTTTGAATG
ATCACCATGT TCTTCTTGAG GGAACTCTGT TGAAGCCAAA CATGGTGACA CCTGGATCTA AATCTGCAAA GGTTGCTCCT
GAGGTGGTTG CTGAACACAC TGTTAGAGCC CTGCAGCGAA CTGTACCTGC TGCAGTTCCT GCGGTAGTTT TCTTGTCTGG
TGGACAGAGT GAGGAGGAGG CAACCCTCAA CCTCAATGCC ATCAACCTGG TTAAGGGGAA GAAGCCATGG ACACTCTCTT
TCTCTTTTGG AAGGGCACTT CAACAGAGTA CCCTTAAGGC ATGGAGTGGA AAAGATGAGA ATGTGAAGAA GGCTCAAGAA
GCCTTATTGG TAAGAGCCAA GGCTAACTCA GAGGCAACTC TTGGAACCTA CAAGGGTGAT TCAAAGCTTG CTGAGGGTGC
CTCAGAGAGT CTCCATGTTG AGGACTACAA GTACTGA

>Vigan.03G132500.01
MSHFKGKYHD ELIANAAYIG TPGKGILAAD ESTGTIGKRL ASINVENVES NRRALRELLF TAPGALQYLS GVILFEETLY
QSTASGKPFV QLLTEAGVLP GIKVDKGTVE LAGTDGETTT QGLDGLGQRC AKYYEAGARF AKWRAVLKIG PNEPSELSIH
ENAYGLARYA VICQENGLVP IVEPEILVDG PHDIHKCAAV TERVLAACYK ALNDHHVLLE GTLLKPNMVT PGSKSAKVAP
EVVAEHTVRA LQRTVPAAVP AVVFLSGGQS EEEATLNLNA INLVKGKKPW TLSFSFGRAL QQSTLKAWSG KDENVKKAQE
ALLVRAKANS EATLGTYKGD SKLAEGASES LHVEDYKY*