GBrowse Details

Vigan.03G131200.01

Basic Information:
Name: Vigan.03G131200.01
Multiple alignment
Variant Information
Position: Chr03:14835428..14836448 (+ strand)
Length: 1021
Functional Information:
Description: Similar to protein. [A9TM45, Physcomitrella patens subsp. patens]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:54.12,33.39,15.29,13.07,30.06,35.30,33.67,8.46
Arabidopsis thaliana homolog: AT5G58920.1
Automatic updates:
Name: NM_001250333 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305827 (LOC100305827), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:14835428..14835515 (+ strand)
Length: 88
Type: five_prime_UTR
Position: Chr03:14835516..14835555 (+ strand)
Length: 40
Type: CDS
Position: Chr03:14835753..14836192 (+ strand)
Length: 440
Type: CDS
Position: Chr03:14836193..14836448 (+ strand)
Length: 256
Type: three_prime_UTR

>Vigan.03G131200.01 class=Sequence position=Chr03:14835428..14836448 (+ strand)
ACTTTCCAGG CCTTGGCCAA CGCTACGAAA CCACGTCATC GCCACCAGTA TTCAATGATG ATCGAATGAT CGAATTCTCA
CTCTCGCAAT GCCTCGGAAG CGCTTTCAGG AGCCACAACC CAAAACAGGT ATCTCTCTTT CTACATACCC AAAATTTGGA
AAAACTATAA ATATCTTACC AACGTACGTG TTAAACCATA TCAACGGCAT GCGGGTCGAT TTTCGCATAC TCAAACCTTG
AACACAAGGT GTTTGATAAA ATGTTTCAGA CAGGAATCTT GCATCTTTGA TTAAGTTTTG TGGACCCGTC TATGTTCTAA
CGCAGGTGTA CAACATGCCC AGGATTTCCT GAGGAAAATT GGGTTGGGGA AGGAGAACTA CTACTTCTGG AAGCAGATTG
GAAAGGCTTT GGTATGCACG TACGCAGTGA TGGGGGCAGT GTGGTGGTAC AACGAGACAT CGCCACTGGG TTGGTGGACA
CTGAAGCCAA AGCCAAAGGA AGAGAAGGAG CTTGCTCATT TGTACGAGCG GAGGATGTTT CCTTACCCGG GTGATGAAGA
GGCAATGCAG GAGTTCATTG CCAAGGGTGG AATGATTGGG ACAAGCATTG CTCCCAAAGG AGCTGCTGAG GATGATAAGG
ATGAGAGTGA TTACAAGAAG GAGATGAAGG ACAAGAAGTT TGAACAGGAG GCTCAGAAAC TTTGGATCAG GATGAGGAAT
GAGGTCATTG CTGAGTTCAA GGAGAAGGGC TTTGATGTGG AATGAATGAC TGAAGTGAGT GCTCAAAACT ATTGGTGGTA
GTAAATATTG AGTTTGTTTG GATATTGTAA TTTCAATAAA TGTGTCATAG GGAAAAGACT AATCACTCTA TTTGTTGTTC
TTTGTTGATG GATATGTATG TATATGTGAA CCTGACTAGT GTCACAGCAA TTTCACTTAT TGAACTGGGC TTTTTTCTGT
TTTCCTTATT TACAGTTTTC ATAAATTCAA GCAATGGCAA TGCAACGAGC ATTGGTAAAT A

>Vigan.03G131200.01
ACTTTCCAGG CCTTGGCCAA CGCTACGAAA CCACGTCATC GCCACCAGTA TTCAATGATG ATCGAATGAT CGAATTCTCA
CTCTCGCAAT GCCTCGGAAG CGCTTTCAGG AGCCACAACC CAAAACAGGT GTACAACATG CCCAGGATTT CCTGAGGAAA
ATTGGGTTGG GGAAGGAGAA CTACTACTTC TGGAAGCAGA TTGGAAAGGC TTTGGTATGC ACGTACGCAG TGATGGGGGC
AGTGTGGTGG TACAACGAGA CATCGCCACT GGGTTGGTGG ACACTGAAGC CAAAGCCAAA GGAAGAGAAG GAGCTTGCTC
ATTTGTACGA GCGGAGGATG TTTCCTTACC CGGGTGATGA AGAGGCAATG CAGGAGTTCA TTGCCAAGGG TGGAATGATT
GGGACAAGCA TTGCTCCCAA AGGAGCTGCT GAGGATGATA AGGATGAGAG TGATTACAAG AAGGAGATGA AGGACAAGAA
GTTTGAACAG GAGGCTCAGA AACTTTGGAT CAGGATGAGG AATGAGGTCA TTGCTGAGTT CAAGGAGAAG GGCTTTGATG
TGGAATGAAT GACTGAAGTG AGTGCTCAAA ACTATTGGTG GTAGTAAATA TTGAGTTTGT TTGGATATTG TAATTTCAAT
AAATGTGTCA TAGGGAAAAG ACTAATCACT CTATTTGTTG TTCTTTGTTG ATGGATATGT ATGTATATGT GAACCTGACT
AGTGTCACAG CAATTTCACT TATTGAACTG GGCTTTTTTC TGTTTTCCTT ATTTACAGTT TTCATAAATT CAAGCAATGG
CAATGCAACG AGCATTGGTA AATA

>Vigan.03G131200.01
ATGCCTCGGA AGCGCTTTCA GGAGCCACAA CCCAAAACAG GTGTACAACA TGCCCAGGAT TTCCTGAGGA AAATTGGGTT
GGGGAAGGAG AACTACTACT TCTGGAAGCA GATTGGAAAG GCTTTGGTAT GCACGTACGC AGTGATGGGG GCAGTGTGGT
GGTACAACGA GACATCGCCA CTGGGTTGGT GGACACTGAA GCCAAAGCCA AAGGAAGAGA AGGAGCTTGC TCATTTGTAC
GAGCGGAGGA TGTTTCCTTA CCCGGGTGAT GAAGAGGCAA TGCAGGAGTT CATTGCCAAG GGTGGAATGA TTGGGACAAG
CATTGCTCCC AAAGGAGCTG CTGAGGATGA TAAGGATGAG AGTGATTACA AGAAGGAGAT GAAGGACAAG AAGTTTGAAC
AGGAGGCTCA GAAACTTTGG ATCAGGATGA GGAATGAGGT CATTGCTGAG TTCAAGGAGA AGGGCTTTGA TGTGGAATGA


>Vigan.03G131200.01
MPRKRFQEPQ PKTGVQHAQD FLRKIGLGKE NYYFWKQIGK ALVCTYAVMG AVWWYNETSP LGWWTLKPKP KEEKELAHLY
ERRMFPYPGD EEAMQEFIAK GGMIGTSIAP KGAAEDDKDE SDYKKEMKDK KFEQEAQKLW IRMRNEVIAE FKEKGFDVE*