GBrowse Details

Vigan.03G078500.01

Basic Information:
Name: Vigan.03G078500.01
Multiple alignment
Variant Information
Position: Chr03:7674622..7677569 (+ strand)
Length: 2948
Functional Information:
Description: Similar to Protein yippee-like. [V7BA85, Phaseolus vulgaris]
InterPro: Yippee/Mis18 (IPR004910)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:42.33,23.08,48.10,31.89,18.63,51.70,41.90,47.16
Automatic updates:
Name: NM_001251118 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100500435 (LOC100500435), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:7674622..7674985 (+ strand)
Length: 364
Type: five_prime_UTR
Position: Chr03:7674986..7675081 (+ strand)
Length: 96
Type: CDS
Position: Chr03:7676267..7676310 (+ strand)
Length: 44
Type: CDS
Position: Chr03:7676834..7676942 (+ strand)
Length: 109
Type: CDS
Position: Chr03:7677050..7677105 (+ strand)
Length: 56
Type: CDS
Position: Chr03:7677209..7677290 (+ strand)
Length: 82
Type: CDS
Position: Chr03:7677291..7677569 (+ strand)
Length: 279
Type: three_prime_UTR

>Vigan.03G078500.01 class=Sequence position=Chr03:7674622..7677569 (+ strand)
AATAAATAAT TACGGGGGAA GCAGACACGT CTTGTCGGGT TCTCTTTTCG CAGAAAAAAG CGAAGATTGA TTGTTTCTCT
CTCCACATTT CTTGCAAGTC CTCTCCTTCT CTTCTCTTCT CTTCTCTTCT CAGGTAATTT TCAACGATTC CCTTTTTCAT
TTCCCTTCCT CTTCATCATC GTCATCGTAA TCTTCATCTT CTTCTTTTTC TTCTTCTATC CTTCATCGAT TGACGCTATG
TCTAGATCAT CACCGCTTCA ATTTGACCTT TGCGTGATTT CGCTTTGACT GAGTCCTTTC TTTAGTTTAC CCTTCGTCTG
AAAATCCCGG TTGATCTTCA GCCTAGAATT TTCCGAATTG ACCTATGGGG AGGTTGTTTG TGGTTCATCT CGAGGGGAAG
GTCTATAGCT GCAAACACTG CCGTACCCAT CTTGCTCTCT ATGAAGACAT CGTTTCCAAG GTTGTCTTTT TATTTATTTT
CTTTCTTTCC CCTACTTTTA TGACTCACTT TTTTTTCTGC TTTTCTAACT TCGTTCTGGG TTTTTATCTC ATCCCTGTTA
ATTTTATCCG CTGGATGATG AGTTTGTGCA CTAATGTGGG TTTGAATAGT CACTTTATCT GCTTCTCAAG CATTTCTTTT
TCTTTTCCTC TGATAGTCTG TCCATACAAT TTTGAGAGTA CAAATTGTTA ATTTTAATGA TTGATTTGAT ATACATCTTT
TAGTTATTGT TTACTTGTAT TGTATTCCTC TGGCTCAATT TGGGATTTTT TCTTATTCTT TTTCCCAATT TCCTGGGGAA
ACATCATGTG CCAAGGCTAT AGCATAGATG TAAAACCACT TATGAGTTTT CACCTAATGG CTATTAGTTA AAGCTTTTAG
GAGGGTTGGT TATTGTTGTG GTATCACTGT CTTTGCGATC AAGCGATTAA CAGTTTAATC CTTGACTGGA TTGCATCCTT
GTTTACCAAT TCTTTTTGCA AATGAACTTT ATTGCTAAGA TCCTGTAAAT CATGAAGATA CTTGTGTCAT TTGTTGTGTT
TTGTATTTTT GTATATAAAT TGTAATAGTT AATGGACACA AGTCTTGTGG AGGTAACCTT TCTTTGCTGG TTTAACTCTG
AACAATTAAC TCGTTGCTGC GTATTCTTAG ATAATAGATA CTTTGCTTAA AAAGAGAGGG TGAAAGTAGA TATTTTTCTG
GTTGGCTGTA TGCCCAGAGG AGAACCGAGA AAGATGTTCT CTAAATTAAT GGCTAACCAC CGTGGTTTGG CTGGTACAGC
ATATTTCTTA GAGAAGCTGT GAAAAGCCAA GCTATTTGGA TTTTGATTCT TCATGATTTT GTGAATATAA GATGTGCAAA
TAAATTATAA GTGGCAGAAC TTTTGGTTCT ACTTGGCCCT TTACTTGCTG AAGTGCTCCT ATCCTCTTAC ATGGAATTTG
AACCCACTCG ATTGTCTCGG TTGAAGAAAA TTTGTTGTGT TAAGTAGTAT ACTTTAATGG GCCAAAGCAT CAGTTATGCC
ATTGTGATAA TTTTTCATCT TCATTGTATT GGTTTTGAGC TTTCGCTCAC ATTGTTTTAT TCACATCTCG CCTTCTTCTA
TAAAATATTT CTGATTTCCA TTTTTTCTTG TGCTGTTTTA TCCAGTCTTT CCACAGCAGA CATGGGAAAG CTTATCTCTT
CAGTAAGGTG TAAGTTATCC TTGATCTTGG AACCTTATTT ATCATTATGT GATTTCTAAA TGAAACTAAG ATAAACGTTC
TCTTTTTTGT ATGAATGTAT CTGGACAATT AGTGATAAAA TTTTGAAATA TAGTTGTAGG CCAATTACAT TGTCTAAAAG
TAAGGCCAAA AAATCAAGGG ATTTTTAATG ACATTTTGTT TGTCCTAGAA CTTGTTTGAG TGTATACATT ACACATTGCT
ATTATAGTCC TTGTTTTGTG CATCATGAAT TCACTCATGC TGTCTTTATG ACTTGGCAAT AGAAGTCATA TGTGCATCGC
AGCTACATAG CAAGAACAAT GCATAGCTGC ACTCTAATCA ACCGACATTT AGGTGAATGT AGATCTTGTA GCTTGTAACC
GAAGTGTTAT GCGGAAGAGA TGTCTTTGTT ATTCATGGCT TCTCGCTTCT GAATGTCCAA AGATCTAGCA ACGTTATGTT
TTATAGTTGG TTCTGTTTAT AGATGCAGTT AATGTATTTT ATTCGTTTAC AGCGTGAATG TTACTGCTGG AGAAAACGAG
GACAGACAGA TGCTCACTGG GATGCATACT GTGGCTGACA TTTTCTGTGT GGGGTGTGGA TCAATTGTGG GTTGGAAATA
CGTAAGATTT ATAACTGTGT TTTCGTAAGA TTTATAACTG TGTTTCACGA GTACGATTTT TTCTATTTGT ACGTGTAATT
TAGCAGTTAC CACTTGGGTT TCTTTCAGGA GACAGCTCAT GAAAAAATCC AGAAGTACAA GGAAGGAAAA TCTGTACTTG
AACGGTAAGA GAAATGTTGT GTGAGAACTG AGAAAACACT CTTTATACAT GAAGTTCTTT GGAAGACAAG TATCTGGTGG
ACTTAACATG TTTTTACTTA TGGCCAGGTA CAAGGTGTCA GGTCCTGATA GCTGCAATTA TTGGGTCGGC CATGAAGCAC
ATGGTGGAAG TGATGCAGAT GACGCTTAGT CATCTGCCTT TGACAATTGA ATTGTACATT CTTTAATCCC CTTCCCCTGT
TGTTCAACGA GTGTGGATTT TATTCGGGCA GTATTGCAAA ATCTGCATGT TGTCCCAAAG ACAATTTAAA TACATTTGAT
TGTTAATTCT GATGTAAAAA AAAAAACAAC TAATGTTAAA ACTTCTAAGT TCGAATCAAT CATGTTTTTC TTGTTGTATA
TTGATCTCCA TTCGCTATTT TCAATTGTCA GGAGTTGGCT TGTAGCGTCA AACTCAAGTA CTTTCGGG

>Vigan.03G078500.01
AATAAATAAT TACGGGGGAA GCAGACACGT CTTGTCGGGT TCTCTTTTCG CAGAAAAAAG CGAAGATTGA TTGTTTCTCT
CTCCACATTT CTTGCAAGTC CTCTCCTTCT CTTCTCTTCT CTTCTCTTCT CAGGTAATTT TCAACGATTC CCTTTTTCAT
TTCCCTTCCT CTTCATCATC GTCATCGTAA TCTTCATCTT CTTCTTTTTC TTCTTCTATC CTTCATCGAT TGACGCTATG
TCTAGATCAT CACCGCTTCA ATTTGACCTT TGCGTGATTT CGCTTTGACT GAGTCCTTTC TTTAGTTTAC CCTTCGTCTG
AAAATCCCGG TTGATCTTCA GCCTAGAATT TTCCGAATTG ACCTATGGGG AGGTTGTTTG TGGTTCATCT CGAGGGGAAG
GTCTATAGCT GCAAACACTG CCGTACCCAT CTTGCTCTCT ATGAAGACAT CGTTTCCAAG TCTTTCCACA GCAGACATGG
GAAAGCTTAT CTCTTCAGTA AGGTCGTGAA TGTTACTGCT GGAGAAAACG AGGACAGACA GATGCTCACT GGGATGCATA
CTGTGGCTGA CATTTTCTGT GTGGGGTGTG GATCAATTGT GGGTTGGAAA TACGAGACAG CTCATGAAAA AATCCAGAAG
TACAAGGAAG GAAAATCTGT ACTTGAACGG TACAAGGTGT CAGGTCCTGA TAGCTGCAAT TATTGGGTCG GCCATGAAGC
ACATGGTGGA AGTGATGCAG ATGACGCTTA GTCATCTGCC TTTGACAATT GAATTGTACA TTCTTTAATC CCCTTCCCCT
GTTGTTCAAC GAGTGTGGAT TTTATTCGGG CAGTATTGCA AAATCTGCAT GTTGTCCCAA AGACAATTTA AATACATTTG
ATTGTTAATT CTGATGTAAA AAAAAAAACA ACTAATGTTA AAACTTCTAA GTTCGAATCA ATCATGTTTT TCTTGTTGTA
TATTGATCTC CATTCGCTAT TTTCAATTGT CAGGAGTTGG CTTGTAGCGT CAAACTCAAG TACTTTCGGG 

>Vigan.03G078500.01
ATGGGGAGGT TGTTTGTGGT TCATCTCGAG GGGAAGGTCT ATAGCTGCAA ACACTGCCGT ACCCATCTTG CTCTCTATGA
AGACATCGTT TCCAAGTCTT TCCACAGCAG ACATGGGAAA GCTTATCTCT TCAGTAAGGT CGTGAATGTT ACTGCTGGAG
AAAACGAGGA CAGACAGATG CTCACTGGGA TGCATACTGT GGCTGACATT TTCTGTGTGG GGTGTGGATC AATTGTGGGT
TGGAAATACG AGACAGCTCA TGAAAAAATC CAGAAGTACA AGGAAGGAAA ATCTGTACTT GAACGGTACA AGGTGTCAGG
TCCTGATAGC TGCAATTATT GGGTCGGCCA TGAAGCACAT GGTGGAAGTG ATGCAGATGA CGCTTAG

>Vigan.03G078500.01
MGRLFVVHLE GKVYSCKHCR THLALYEDIV SKSFHSRHGK AYLFSKVVNV TAGENEDRQM LTGMHTVADI FCVGCGSIVG
WKYETAHEKI QKYKEGKSVL ERYKVSGPDS CNYWVGHEAH GGSDADDA*