GBrowse Details

Vigan.03G067100.01

Basic Information:
Name: Vigan.03G067100.01
Multiple alignment
Variant Information
Position: Chr03:6490811..6495382 (- strand)
Length: 4572
Functional Information:
Description: Similar to Uncharacterized protein. [I1M7K0, Glycine max]
GO: Biological Process: lipid metabolic process (GO:0006629)
Molecular Function: hydrolase activity (GO:0016787)
Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788)
InterPro: Lipase, GDSL (IPR001087)
SGNH hydrolase-type esterase domain (IPR013831)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.03,0.02,12.53,64.17,0.02,27.94,0.25,35.83
Arabidopsis thaliana homolog: AT2G42990.1
Automatic updates:
Name: NM_001252935 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max GDSL esterase/lipase At2g42990-like (LOC100809260), mRNA.
PubMed ID: 14624337 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr03:6490811..6491168 (- strand)
Length: 358
Type: three_prime_UTR
Position: Chr03:6491169..6491362 (- strand)
Length: 194
Type: CDS
Position: Chr03:6493638..6494127 (- strand)
Length: 490
Type: CDS
Position: Chr03:6494854..6495219 (- strand)
Length: 366
Type: CDS
Position: Chr03:6495220..6495382 (- strand)
Length: 163
Type: five_prime_UTR

>Vigan.03G067100.01 class=Sequence position=Chr03:6490811..6495382 (- strand)
AAAAAATGGG AATAAACCCA GAAACGTGAT AACACATGCA AACCCTCATT AAAATCTGCA ACCAAACTTT CTCAGCCAAT
TAATCACACA CATCTAATTT CGAACCACTA CTATAAAACC TTCTTCTCCG TTAACTTTTC TTCCCCACCA GCAAATTATC
ATCATGACCC TCACATGCCT ATTACTGTTC TTAATCCACA TTGTGGTGGT AAAAAATTCT GAGACTAGTA ACAATGTCCC
TGCTGTCATA GTTTTCGGAG ACTCCTCTGT GGATTCTGGG AACAACAACG CCATAGCCAC TGTTCTCAAG AGCAACTTCA
AGCCCTATGG TCGTGACTTC GAAGGTGGTC GTCCTACGGG ACGCTTCTGC AACGGTCGTG TCCCTCCAGA TTTCCTTGCT
GAGGCCTTTG GCGTCAAATC AACCATTCCT GCATACTTAG ATCCTGCTTA TACCATTCAG GATTTCGCCA CCGGTGTTTG
CTTTGCCTCT GCTGGAACTG GTTATGATAA TGCTACTTCT GCTGTTCTGG TAAGTGTCTT TTCGGGTTTT TTCTTTTCAA
TCATCAAACA AAGTAATCCT ACCTACTTCT GCAGTTGCCG GATTTCTTTT TAGGAAATAG AGTTTCTATT TTTTTATCTT
TTCATAATTT AAAAGAAGTT GTAACCCGGT TTATCAGCTC ACAAAATCAA GAAGAAACCC CACAAACATA TTTTTAGAAT
GTCTGGTAAA TCTTACCATC TTTAGCATCA AGTTAAAGGG ATTCTTTGCA AGAGTTTAAT TTTGATAAAA TCAAATAGTG
TTGAACTATT ATGTAGTCAA ACTCCCCTAA TAACATTCTG TTGCATGAAT GGTATTTTAA AAAAAATGTT TTGAATTAAT
TAAAATATAA AGAGAAGTGT TAATAAAACA CATTTTGGAA CAAACTTTAC TGATATGTTA TCTTATATAT TTAAAAGGGT
GTTAGAAAGT GATTCACCAA ATAATAGTAT GCCATTAAAA TTCAATTCAA GAGTGCTATG TTGAATGTAT ATATAATATT
ACTGTTATGG ATCTGACTCT GTCATCATCA TTAATATATT TCCATCCTCT CAATGTTTTT TATTCAATCA CTTCAATGTT
GTATTGAATC TTTCACTTTA ATATCTTGTC TTCTTGCGCC AGTGATACAG TACGCTGGAC GGAGACCATT CAATTTGTAT
AATTAATAAC ACGTTCAGTG TTTTTTTTTT TTCTGTTACA TCTTAAATCT TGCAGAACGT GATACCACTG TGGAAGGAAC
TAGAGTTCTA CAAGGAATAC CAAACCAGAT TGAGAAGCCA TGTTGGTGTA GAAAAAGCCA ACGAGATCAT AAGCGAAGCC
TTGTATTTGA TGAGTCTAGG AACCAACGAT TTTCTTGAGA ACTATTATGT GTTCCCAACC CGAAGGATCC ACTTCACCGT
GTCACAGTAT CAAGATTTTC TACTGAGTAT TGCTGAGAAT TTTGTGAGGG AATTGTATGC ACTTGGAGCA CGCAAATTGT
CCATAACTGG TCTTATTCCC ATAGGGTGTC TACCCTTAGA GAGGGCCACC AACATTTTGG GGGACCATGG TTGCAACGAG
GAATACAACA ACGTTGCTTT GACCTTCAAT GCCAAGCTGG AGAATGTGAT AGCAAAGCTT AATAGAGAAC TACCACAGTT
GAAAGCTTTG TCGGCAAATG CATACTCTAT TGTCAATGAT ATCATTACAA GACCTTCTGC TTATGGTATG TGTTATCTTC
TTCTACTCTC ACTTCTCGTG TTTTTGTTTT TATCTGGTAT GCATGAACAT GGTGATGGTG ACGATGATTA TGGTGTTCTG
TGCTCTGTGC TCCTTTTTTT TCTTTCTTCC TCGTATTGAA CGAAATAAAA TAGAAAATAA TCATTTTCAA GTTTATAAAA
AGAAAGCAAG GCTACTATAT AAATTCAATT ATACAAAGTA GAAAGATAAA ATAGGAAATA GTAAATGCAT GCAATTAATA
TACAAAAGAA TGCAGTGCCG TGTTATAACC AAAGAAATAC ATTATTCATA TCATCAAAAT CCACCCCACC AATAGTTGGT
CATACTTTTT TTTATCAGAA AATTATATAT GAATATATAT ATATATATAT ATATATATAT ATAAAGAATA TTTTAAGATG
TTCAAATTCA TATGTAAAAC AAAAAAATTA TATAAAATTG TGCAAAAAAA GTTAAAATAT ATTTATATTA TGAAAAGTAT
AAATATGAGA ATGTTCTTCT CCCTACTTAA ATTTTAAATG GGATGTAATA GATGTTTCCT TCAAATTCAG TTTTACTAGA
TTTTCAAGTG TCCTATTAAT AATCAATAAT ATATTTTATT AGGTATTTTA ACTATTTCAG AAGTTTCTAT CAATTTTTTT
TAGTTTTAAT GTAATAAATA TATTTTAACG ATTTTTTATT TTTTATTTAA AGGTTCACAT ATATTTATGT AGATTTTTTT
TTAAATGTTT AAAACTGTAC TTATTACTAA TTTTAATATT CTTATTCAAT AAACACATTG TAAATACTAT ATTCTAAAAA
AATGTTAAAT TTCCTAATAT GGACGGAAAT TAAGCATAGT TTACGGAAAT TAAGCATTAA TATTAATATG GACGAGTTTC
TAATAATATG ACGCATAATA CCAGTTAATA TCAATAGTGA TAACTTTGGC AATTTTATGC TTAAACAAAA CAAAATTTTA
TATAATTTAA AGCTATTAAA TTGGAAACAT TTAGTGAAGC ATGCTAGTTT GGTGGTATAA AATTATATAA ATGATATCTG
CATGATTTTT AATTTTCTAG AGGGGTAATT ACAATTTTAT GCTTTTAGTT AATCTTGAAT TGTTAAAAAA TTTGGAGAAA
GATTAAACAA TAAATTAAAA AAAATTAAAG GAGATAAAAA TGGTAAAATC ATTGAGCATT GTTGAGAATA AAAGAAAAAA
AAAAACAATA GAATATAAAT TCATTAATTA GCTACTTCAT GTAAGAAATG TTATAATAAA TTAATGAGAT CGAACCTCTC
TTGAATACTT CTGTCACAGT CAAACAAAAT TATAAAAATA TTAAGTAACA GTTGCATCTC CTAGAGTAAC CAGCAGATAT
AGTGTGGTTT TTTTTTGTAG TTCATTTGAA TTTAATTAGG AAATAGTAGA TGTAAGAAAA ACATAGCATT TAATTCTAAA
TTTTAATGGT CACTGAAAGC TTGTGTGCTT GCCTACACAG CTTTTAGGTA TGCTTTCACT TCTTATCATT AATACTAATT
TATTGGCACC AGGTCACACT ATCAACAACC ACAATCAAAT TCATAAAAGG TTTAATTTTG AACCCAATAA TTTCACGCAA
CACACATATT TCTGTGTGTG ATTTACACAC ATATACAACA AAACTAAGTT AGTTCTGCAT ATTTTTAACC AACTTTTAAA
TGTCTAATGT GGTTGTTTAA ATGTCTTTTA ATCAATTTAA AGCACTTGTT TATCAAATTT CTATAAATAA GAAGTACGAA
ATGAATATAA ATTGAACAAG TGTATATTCT AACTGATAAA CCTTTTTAAT TATAGGTAAA AACTATAATT TAAATTTAAC
TCAATTTTAT AAAATAAATT TGTAATTAAA GTAGCTCTAA TACAAATAAA CTTTAAATTT AAGTTACTCT TATTAAATCA
ACTTATCAAA TAAAAAGTTT GCAGTTATTG TAAGTTAACT AGTAGGGTGA GGTTTGCACC ACTTATAAAG TATGAATTGG
CCTAATAGCG GCCCGATAAT GGGTGAAAAC AAAAATGTCC ACTTAGAATT CGCTACTGAT ACCATGTTAG AAGTGAACTT
TAAACCTAAT TCAACCCCAC AAAATCGGTT TATAAGGTGA GATTTGCACT CACTTATAAA TTATGAATTG GTCTTATCTC
TAGTCGATGT GGAATTTCCA AGACTATGTT ACTCTTTCAG TTCAGTTCAT GTATCAATTC TATAAGTTGA AAATTATTGA
AACTCATAAA TTGATTTCAG GATACGAGGT TGTAGAAAAG GCGTGTTGTT CGACAGGAAC GTTTGAGATG AGCTACTTGT
GCAGTGACAA GAGTCCACTT ACATGCACAG ATGCGGAAAA GTATGTGTTT TGGGATGCAT TTCATCCTAC TGAAAAGACA
AATCGCATAG TTTCAAACTA TTTGATTCCA AAGCTTAAAG CAACCTTTCG ATGATCATCA TCATCAGCAC GCATTACTTT
AGAAGATTGC ACAGTCTTGC CTAGAGCAGC ATCAAAATAT ACAGATAGCT AGGTTTTATA TTGGGTTCCC ATGCATACAT
GTTCGACATG TATACATTTT ATGTCTTCTG CTATGGCAAA TAAATTAACA CCTGAATTGT AGTCATGTGC ACCACTTAGA
ACCTCGTGTT GTGTTTGGTT TTTTCGCTTT TTAATTCATT CATGTGTGCC TGTTGGCTTT TTCATTTTAC GTGATTTTGT
GTTGCCAACT TTGATTAACT TGTAAACCAG ACTAAACATT GTTCAACTAA CCATCTCCCA GGATCCTTGA TTACCTTGCA
CCTAAAATAG AA

>Vigan.03G067100.01
AAAAAATGGG AATAAACCCA GAAACGTGAT AACACATGCA AACCCTCATT AAAATCTGCA ACCAAACTTT CTCAGCCAAT
TAATCACACA CATCTAATTT CGAACCACTA CTATAAAACC TTCTTCTCCG TTAACTTTTC TTCCCCACCA GCAAATTATC
ATCATGACCC TCACATGCCT ATTACTGTTC TTAATCCACA TTGTGGTGGT AAAAAATTCT GAGACTAGTA ACAATGTCCC
TGCTGTCATA GTTTTCGGAG ACTCCTCTGT GGATTCTGGG AACAACAACG CCATAGCCAC TGTTCTCAAG AGCAACTTCA
AGCCCTATGG TCGTGACTTC GAAGGTGGTC GTCCTACGGG ACGCTTCTGC AACGGTCGTG TCCCTCCAGA TTTCCTTGCT
GAGGCCTTTG GCGTCAAATC AACCATTCCT GCATACTTAG ATCCTGCTTA TACCATTCAG GATTTCGCCA CCGGTGTTTG
CTTTGCCTCT GCTGGAACTG GTTATGATAA TGCTACTTCT GCTGTTCTGA ACGTGATACC ACTGTGGAAG GAACTAGAGT
TCTACAAGGA ATACCAAACC AGATTGAGAA GCCATGTTGG TGTAGAAAAA GCCAACGAGA TCATAAGCGA AGCCTTGTAT
TTGATGAGTC TAGGAACCAA CGATTTTCTT GAGAACTATT ATGTGTTCCC AACCCGAAGG ATCCACTTCA CCGTGTCACA
GTATCAAGAT TTTCTACTGA GTATTGCTGA GAATTTTGTG AGGGAATTGT ATGCACTTGG AGCACGCAAA TTGTCCATAA
CTGGTCTTAT TCCCATAGGG TGTCTACCCT TAGAGAGGGC CACCAACATT TTGGGGGACC ATGGTTGCAA CGAGGAATAC
AACAACGTTG CTTTGACCTT CAATGCCAAG CTGGAGAATG TGATAGCAAA GCTTAATAGA GAACTACCAC AGTTGAAAGC
TTTGTCGGCA AATGCATACT CTATTGTCAA TGATATCATT ACAAGACCTT CTGCTTATGG ATACGAGGTT GTAGAAAAGG
CGTGTTGTTC GACAGGAACG TTTGAGATGA GCTACTTGTG CAGTGACAAG AGTCCACTTA CATGCACAGA TGCGGAAAAG
TATGTGTTTT GGGATGCATT TCATCCTACT GAAAAGACAA ATCGCATAGT TTCAAACTAT TTGATTCCAA AGCTTAAAGC
AACCTTTCGA TGATCATCAT CATCAGCACG CATTACTTTA GAAGATTGCA CAGTCTTGCC TAGAGCAGCA TCAAAATATA
CAGATAGCTA GGTTTTATAT TGGGTTCCCA TGCATACATG TTCGACATGT ATACATTTTA TGTCTTCTGC TATGGCAAAT
AAATTAACAC CTGAATTGTA GTCATGTGCA CCACTTAGAA CCTCGTGTTG TGTTTGGTTT TTTCGCTTTT TAATTCATTC
ATGTGTGCCT GTTGGCTTTT TCATTTTACG TGATTTTGTG TTGCCAACTT TGATTAACTT GTAAACCAGA CTAAACATTG
TTCAACTAAC CATCTCCCAG GATCCTTGAT TACCTTGCAC CTAAAATAGA A

>Vigan.03G067100.01
ATGACCCTCA CATGCCTATT ACTGTTCTTA ATCCACATTG TGGTGGTAAA AAATTCTGAG ACTAGTAACA ATGTCCCTGC
TGTCATAGTT TTCGGAGACT CCTCTGTGGA TTCTGGGAAC AACAACGCCA TAGCCACTGT TCTCAAGAGC AACTTCAAGC
CCTATGGTCG TGACTTCGAA GGTGGTCGTC CTACGGGACG CTTCTGCAAC GGTCGTGTCC CTCCAGATTT CCTTGCTGAG
GCCTTTGGCG TCAAATCAAC CATTCCTGCA TACTTAGATC CTGCTTATAC CATTCAGGAT TTCGCCACCG GTGTTTGCTT
TGCCTCTGCT GGAACTGGTT ATGATAATGC TACTTCTGCT GTTCTGAACG TGATACCACT GTGGAAGGAA CTAGAGTTCT
ACAAGGAATA CCAAACCAGA TTGAGAAGCC ATGTTGGTGT AGAAAAAGCC AACGAGATCA TAAGCGAAGC CTTGTATTTG
ATGAGTCTAG GAACCAACGA TTTTCTTGAG AACTATTATG TGTTCCCAAC CCGAAGGATC CACTTCACCG TGTCACAGTA
TCAAGATTTT CTACTGAGTA TTGCTGAGAA TTTTGTGAGG GAATTGTATG CACTTGGAGC ACGCAAATTG TCCATAACTG
GTCTTATTCC CATAGGGTGT CTACCCTTAG AGAGGGCCAC CAACATTTTG GGGGACCATG GTTGCAACGA GGAATACAAC
AACGTTGCTT TGACCTTCAA TGCCAAGCTG GAGAATGTGA TAGCAAAGCT TAATAGAGAA CTACCACAGT TGAAAGCTTT
GTCGGCAAAT GCATACTCTA TTGTCAATGA TATCATTACA AGACCTTCTG CTTATGGATA CGAGGTTGTA GAAAAGGCGT
GTTGTTCGAC AGGAACGTTT GAGATGAGCT ACTTGTGCAG TGACAAGAGT CCACTTACAT GCACAGATGC GGAAAAGTAT
GTGTTTTGGG ATGCATTTCA TCCTACTGAA AAGACAAATC GCATAGTTTC AAACTATTTG ATTCCAAAGC TTAAAGCAAC
CTTTCGATGA 

>Vigan.03G067100.01
MTLTCLLLFL IHIVVVKNSE TSNNVPAVIV FGDSSVDSGN NNAIATVLKS NFKPYGRDFE GGRPTGRFCN GRVPPDFLAE
AFGVKSTIPA YLDPAYTIQD FATGVCFASA GTGYDNATSA VLNVIPLWKE LEFYKEYQTR LRSHVGVEKA NEIISEALYL
MSLGTNDFLE NYYVFPTRRI HFTVSQYQDF LLSIAENFVR ELYALGARKL SITGLIPIGC LPLERATNIL GDHGCNEEYN
NVALTFNAKL ENVIAKLNRE LPQLKALSAN AYSIVNDIIT RPSAYGYEVV EKACCSTGTF EMSYLCSDKS PLTCTDAEKY
VFWDAFHPTE KTNRIVSNYL IPKLKATFR*