GBrowse Details

Vigan.03G059100.01

Basic Information:
Name: Vigan.03G059100.01
Multiple alignment
Variant Information
Position: Chr03:5672637..5675175 (+ strand)
Length: 2539
Functional Information:
Description: Similar to CM0545.330.nc protein. [B0BLA9, Lotus japonicus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.96,9.00,49.04,1.83,10.96,2.35,10.16
Arabidopsis thaliana homolog: AT3G44020.1
Automatic updates:
Name: NM_001250471 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305836 (LOC100305836), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:5672637..5672662 (+ strand)
Length: 26
Type: five_prime_UTR
Position: Chr03:5672663..5672950 (+ strand)
Length: 288
Type: CDS
Position: Chr03:5673576..5673612 (+ strand)
Length: 37
Type: CDS
Position: Chr03:5674570..5674653 (+ strand)
Length: 84
Type: CDS
Position: Chr03:5674901..5674953 (+ strand)
Length: 53
Type: CDS
Position: Chr03:5674954..5675175 (+ strand)
Length: 222
Type: three_prime_UTR

>Vigan.03G059100.01 class=Sequence position=Chr03:5672637..5675175 (+ strand)
TATTATTATT TGATTTTGTT TTATCAATGG CCACTCTTCC TTACTGCACT CTTCATCCTC TATCTTCTTC TCTCAGTCCT
TCTTCCACTT TGGTTCACCT TTGTTCATGC TCTTCCACAC CTTCTCGTCC TCTTCTCCAA TTCCCCTCCA ATCTCAGACG
CAAAGCCACC AAGAAGCCCA GACTGTTTTT GATCGTTCAC CCCATTTTTC TCTTTAACGG CGTCGCCACC ACTTTCTATT
TTGACACCCA AACAGTCATC GTTACTGTTA GTGTTTTGGC CGCCATTGCT CTTTCTCTCT TCCTTGGCCT CAAGGTTCTC
CCTTTTCATT CTTTTAACTA TGGGCTTCTC TCACTTTACA TAAAAACGAA AACTTTTTTA TTTTCGTTTT TATATGTAAT
GTTAGACTTA CTATTTCACC ATAAGACCCA CGTGCATTTA GTGTTTATGT ATTCACTTAT CTAATATTTC GGAAATGTGT
TCACTTTAGC ATATCATGCT TCCAATTTTG CTAATTATTT CTTTTTATTG AATGATGTTT CTTGTCTTTA ATTAAGATTG
TTACTTCTGC CTTGTGCTTA CTTTCTGCTG CTTCAATTTT TGTTATGGAA AATTGTGGAG TGGGAATGAT AAATGTGATA
AGTGATCTGA AAGAAAAGCA ATGTGGAAGT GAGTTATAAG AGAAAATTAA TTTACACTTA TAATTATCTT CTGAAATTTT
TGGGTTTTGA TTTCATAAAG TGATAAACAT TTTTTTTAGA GTGGTGGTGG TGTTGGTGAA TGTTGGCAGC CTACCTCATT
CAGAAGTGTA ATATAGTATG CATATGCATA ACTGCATCAA CATTTGCTCA CGGAAGTGTG TGCTACTTTT TAACAGTAAC
ATTATGGGTT AAATTAAAGT TGATACTTCT GTTTGTTAAT GAGTGATGGG GTTTTGCAGG GTGATCCGGT GCCTTGTGAG
CGATGTGGTG GCAATGGTAA TTATCTTTCA GCATTTGAAC TTAAACATTG TTGTGCTTTA GTGTTGAATT TTAGGGAATT
ATTGAGGCTT GAATCGTGAT GGTAACAATA CGAGGAACAT TTTAGATATT GGTGACGAGG ATATCATTAT TCATGTGTTT
AGGACATTGA CTTGAATAAT TGTAGTTGGG GAATAATGAT TGTTTTGAAT AAGGATACTT GGGGTCTGCT TGATTGAGCA
AGTGAGAAAG TGAAGAATAG AAACAGTTTT GGACTAAAGT TATTGGTCAG AGTTGAAAGG AGATTGTTTT ATTTCCCACT
CTTTGTGGTG TTTCTATCAT ACCAGTCAAA GGTGTAGTGC TTTTCATGTG AAAATCTTCA CCTCTTATTT TCAACCTATT
CAACCAAGCT GTCATTTAGG ACCAATTGGT TCTAGTTTCA AAAAATATTC CCAGCAGCAA CACGCCTGAT TGTTGTATTT
GCATAAAGGG AGTGGCTGAC ATGTGCTTTG TGAAAGTTTT TGGATCAGGG TAATCTTTAG AAGTTAGTGG GTAACATATG
ATCTTTTAAT TTTTTGGCTT GATGACTGAT GTTGTGTTTT TCAGCCACTA CAATGTATGA TACAGAATAT AAAGCTTCCA
CCAATTGTTT TTGCATTAAG ATTGCGCTTG TATTATCCCA ATAACTTCAA AATTTTCTCC TTACCCCTTT TCAATAATTA
TATCACTATG AATGGAGATG TATTCTATGA CAATAGTTCA TTTGGATTGG ATAAAGAAAG TGTTGTAGTA CCTATTTTAG
TGATGGTTAT GAATGAGAAT TCTACTTTCT AATGTCATTG CCCCTCTCAC TATTGTGATT CCTGTAAGTG TGCATTGACC
TGCGTTTTTA CATTGCATGT GTGAAATAAA TGGGAACTTG TTTCAGTATC GTTGACAGAA GATACTATTT TGAATGCCGT
TGCTGACAAA CAGGTGGGAC AAAATGCGTG TTTTGTGACT ATGGCAAGAT GAAGCAAGAT ATGGGGTTAA TTAACTGTAA
AGTATGCAAG GGTTCAGGTA TATCTCTCTG TTATCATATG TGTAAAACAA ATTATAATGA TTGCATTTTC TTACCTGAAT
ATTTTGGGTG CATTTCCTTT CCTTTACCAC TTTTAAGGAA TTGTTTGATC TGGTACGTGA AAATCAATAT ATTGTATTCC
CTCAAGGGAA AAAAAGAGAT TATACTCTTT TTTCCATGTT CAACCATGGC TTATTTACTG TCTTCACTGT TCTTTTTGTT
TATGCATGTG TTTCCACTCT ATAGGATTGA TTTTCTGCAA GAAATGTGGA GGTTCAGGCT ATTCCCGTCG GCTATGAGCT
GTGAAATTCC TCCTATATGT TAAGACCATC TGTTCTGAGA TATGTAAGAT GTTGTAACAA TTTTACTTCA TAGTGTCTTT
TTCTCTGTGA ATCATTTTAA TCAAGTTATT CTGAAGTCCT CTTAGCTAAT TGGTTTTTCC ATAAAAATTA GTCTAATTTT
GGTAATAGTG TTTAATATGG TTTCTTCTTG AAAATATAAG TTAGGTAAAA ACATGGTTG

>Vigan.03G059100.01
TATTATTATT TGATTTTGTT TTATCAATGG CCACTCTTCC TTACTGCACT CTTCATCCTC TATCTTCTTC TCTCAGTCCT
TCTTCCACTT TGGTTCACCT TTGTTCATGC TCTTCCACAC CTTCTCGTCC TCTTCTCCAA TTCCCCTCCA ATCTCAGACG
CAAAGCCACC AAGAAGCCCA GACTGTTTTT GATCGTTCAC CCCATTTTTC TCTTTAACGG CGTCGCCACC ACTTTCTATT
TTGACACCCA AACAGTCATC GTTACTGTTA GTGTTTTGGC CGCCATTGCT CTTTCTCTCT TCCTTGGCCT CAAGGGTGAT
CCGGTGCCTT GTGAGCGATG TGGTGGCAAT GGTGGGACAA AATGCGTGTT TTGTGACTAT GGCAAGATGA AGCAAGATAT
GGGGTTAATT AACTGTAAAG TATGCAAGGG TTCAGGATTG ATTTTCTGCA AGAAATGTGG AGGTTCAGGC TATTCCCGTC
GGCTATGAGC TGTGAAATTC CTCCTATATG TTAAGACCAT CTGTTCTGAG ATATGTAAGA TGTTGTAACA ATTTTACTTC
ATAGTGTCTT TTTCTCTGTG AATCATTTTA ATCAAGTTAT TCTGAAGTCC TCTTAGCTAA TTGGTTTTTC CATAAAAATT
AGTCTAATTT TGGTAATAGT GTTTAATATG GTTTCTTCTT GAAAATATAA GTTAGGTAAA AACATGGTTG 

>Vigan.03G059100.01
ATGGCCACTC TTCCTTACTG CACTCTTCAT CCTCTATCTT CTTCTCTCAG TCCTTCTTCC ACTTTGGTTC ACCTTTGTTC
ATGCTCTTCC ACACCTTCTC GTCCTCTTCT CCAATTCCCC TCCAATCTCA GACGCAAAGC CACCAAGAAG CCCAGACTGT
TTTTGATCGT TCACCCCATT TTTCTCTTTA ACGGCGTCGC CACCACTTTC TATTTTGACA CCCAAACAGT CATCGTTACT
GTTAGTGTTT TGGCCGCCAT TGCTCTTTCT CTCTTCCTTG GCCTCAAGGG TGATCCGGTG CCTTGTGAGC GATGTGGTGG
CAATGGTGGG ACAAAATGCG TGTTTTGTGA CTATGGCAAG ATGAAGCAAG ATATGGGGTT AATTAACTGT AAAGTATGCA
AGGGTTCAGG ATTGATTTTC TGCAAGAAAT GTGGAGGTTC AGGCTATTCC CGTCGGCTAT GA

>Vigan.03G059100.01
MATLPYCTLH PLSSSLSPSS TLVHLCSCSS TPSRPLLQFP SNLRRKATKK PRLFLIVHPI FLFNGVATTF YFDTQTVIVT
VSVLAAIALS LFLGLKGDPV PCERCGGNGG TKCVFCDYGK MKQDMGLINC KVCKGSGLIF CKKCGGSGYS RRL*