GBrowse Details

Vigan.03G049800.01

Basic Information:
Name: Vigan.03G049800.01
Multiple alignment
Variant Information
Position: Chr03:4680833..4684374 (- strand)
Length: 3542
Functional Information:
Description: Similar to uncharacterized LOC101203554. [XP_004156055.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:24.99,20.44,13.73,18.22,23.24,22.15,17.82,14.16
Structure :
Position: Chr03:4680833..4681214 (- strand)
Length: 382
Type: three_prime_UTR
Position: Chr03:4681215..4681268 (- strand)
Length: 54
Type: CDS
Position: Chr03:4681486..4681545 (- strand)
Length: 60
Type: CDS
Position: Chr03:4682342..4682382 (- strand)
Length: 41
Type: CDS
Position: Chr03:4682557..4682629 (- strand)
Length: 73
Type: CDS
Position: Chr03:4682711..4682761 (- strand)
Length: 51
Type: CDS
Position: Chr03:4684198..4684263 (- strand)
Length: 66
Type: CDS
Position: Chr03:4684264..4684374 (- strand)
Length: 111
Type: five_prime_UTR

>Vigan.03G049800.01 class=Sequence position=Chr03:4680833..4684374 (- strand)
GAATAAAAAG CAATTATCAT AGTGACTGAG GTTGCGTTTC TCCGTTCTCA GTGAAGTCTT CTCCTTCAAG AAGACGAAGA
ATTAGAAGAA AGAAGGGTTT GCAGTGCAAG CATGGATGAA GCTGAATTTC AACGCCTTCT CCAACTCTTC CCCGTTGTTC
GTTGTCGCGA TTACTCTGTA CCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTGTT TAGGGTTTAC AATTGTATGC
CTTCTCCTTA ATTTTTTTAT CTCCATAACT CTGCATTAGT AATCTGGCTT CTCTGCTGGT TAAAGTTTCG ATCTTTCAGA
GACCCATGTT GTGATTTTTG CATTTCACGT AATGCTTCTC TCTAATGCAA TTAAATCCTT TTTGGTTTTG ATGTTAGTTT
AAGGTGGTAG TGCAGTTTGA TGTATATTAG TGTCTCAATT CTTGAGGAAA TTTTAGGGGA AAGTTTTAGG TTACGAATAC
CATAAAACAT GAGAAGGATT TGGTATGAGA TCTTTGACAA GGTCCAGGAA TGAATTGGGA GGACTTTATC GGTAAGAAAT
ATATGGTTTC AGTTTTGGTG GTTAAATTGG GTATTTTAAT TATATACTTA TCGAGTTGAA AGAAAATTTT AGAAAAGATG
TACTCAGTTT TACCTTGGGA TTGAAGCCAG AGGCTTTGGT AGGAGGTGGG AGCAGTGAGC TACTATCGAA TTTTGCAAAC
CAATGGTGTA TTTCGTTGAA ATGGATTGAT TTTATGTTTA AGGATATTCA TCTCTGTGGA GTTTTCGTGG GAAAAGGCTG
TATTCAATTC ATGGATATTA CCTGGGTCCC TTCTCATGCC TTTTTGAGGA AACATCTGTT CTAAATACTT TCAAGTTTCC
TTGTTGTGTT GTACTCTTTT TTTCTATTGT TATTATTTAG TCTTTTTGGA AGATAGCTCA TCTCCTTCCT TTGTGTTCTT
TCTCTTTTTC ATATTATGAT ACTTGTTTTA TAGAAAATTA CCAATGTCAT AGTATTCTGC GCCAACTTTT GAACTTCATT
GAAACAATTT GAACATACTG AAATCCAAAA GTCTTCTCTT GCTTGTTACG GTTTGAAGGA TCATTTAATT TAACTATTTT
GTTCTTTGTT GGTTGATGAA TGAGAAATAC TTGGATGATG TTAGCGCACA TGCTACTGGA CCTATTTTAG AGACAAAACC
TTGACCTTTC TCCTTCTATA TCTTTACATC CTTTGTGCGA AGTTTGGATT ATGAAGATTG CCTTACGGTT GGTAGGAGTT
GCCCCGGAAT TTGTCAATAC TAGTTAATGT TATCTCATCT TATTCTTATT TTTTATTAAA TACAAAGATT GGAATAATTT
CCCATTTCTG TTCCACTTAC ATATGTAGTG TCCACAATGC TGACGTTTTA TTTTATACGA ATCAATTGGT TTTCTCTACC
TTAAATTCCT TTACTCCTTT GAGTGGCATT TTCTGAAATT GTGATTCAGA TGGAGCGTAC TCTCAAACTA TATATGATCC
AAATTTCAAA ATTTGTGTTT CTTTGCTTAA ATAATTTACG AATTATATCT GAACATGCAT TCAAGTACCA AATTGATAAC
AGTTAAATTT CAGGCAGAAG CAGCGTCATC CAGACAAATT CCATCTGGGG TAGCACAGAA TGAGGTGGTA ATGCTGAACC
TGCATCTGTT ATAGGCACGG ATGTTTGCAT ATATATCATG CCAACTAACG AATTTGTATC TTCAGGTAAA GCAATGGCAA
GATGCATGGG ATGAAAAGGA AATTAACGAT TCTGAGCAGC AAGGACTTGA TCAACATGGT ACAACTATCT TTGGGACATT
TTTTTCAACT TCAATTTCCT AGAAAGCGCA TCAACATCCA TGAGTTGCAT GGAAATATAT TTATTTATTT TGGTTATAAC
TAGTAGGAAA CAGAATAATG ATTTTGAAAA ATTAATGCAT GCTATTCTTG TGTGAATTCT TCAAATGTAC AGATTCATTT
TGGAGCAAGC TAAAGACGGA GGCTGCTAGG AAGGTATTCT AAAATTTACC TGTTATTATA TGCATATAAA TTTGTTTCAG
AATTAGCATC ATAGCACATT ATCAGAAATT TGTTTGCACC CTTAACAACT TTGAAGCTGA TTATGTGAAT ATTGAAGTTT
TAATTGGAAG TAATGGCATG TCTTAGATGC ATCCATGGTT TAGCCTACCC GTCCATAAGA GGAATTTGAC ATATGAAGGG
ATGCATTGGT TTTTATTTGT GTCGTCAATT CCTTACTATT TTCTTGATTA AACCCAAAAT TTCTATTTTC TATATTATTA
TTATAATTAT TTGGAGTCCC ATATGGTATG TCAATATATC AACTGTTTTG CATCATTGCC TCCTCCCTTG GGAAAACAGT
AACCTGGTTT ACTTGATTTG CCCAGTTGAA ATTTCCACTT AATGATGGAC CTTTATTTTG TCAAGAATTT TTTGGGTACT
TTATTTTGTA AAGATAAGGA TAAAAGCATT CCAATGTAAT TTGATTTTGT CTTTTTGGTT ATAGGAGAGA AACATTCGTA
TTATTGTTTT TGTCCATGAA TGAATGTTAC TCTCTGGCAA CTTCCCTTTT TTGTAAACCT GTTTTTGAGA AAGTATAATT
TACTCTTAAA CCCATGCAAG CACAGTGGTG ACAAATGAGA GAAGGGAGTT ATGTCATAGT ATTTATGCTT TAAGCCTATA
AATTTGGTGA TGTTATTGAG AATCCATGAT ATTTACCTGT CATTATTAAA TAAAGCTGTC AATTATGCTT TGAGTGAAAC
TCAGCTCATT GATTGTAATG TTCCAACAGA TGGATGCAGA AGAAGCAGAG AGATTTTGCA AGGCATTCCG ACAAATCCAT
AAGAAACTAG TATGTGCCTT TTAAATTTCA TTTATCTCAT TGTTCATAAT AAATACTACG AAAGATATAT TTTCTCCCTG
AAATTACAGA AAATGAAAAA AGGGGAAAAG AAACTAAAAT TGTTGCTTCT AATGCAATAA ATAGGAACTG TTTCCTTAAT
AGTATTGCAT TTAACGAAAT TTTTTGTTGT TTGATTTTAT GTTTTCCATT ATATTTTATT TTTTAGGTGA ATGAAGAGTT
GAGTTTAGAT GCAGCTCGAA GCTTCTTAAA ATCATCCTAG AGTTCCAAAG AATATGCTTT CAACATTTTC CTTGTGATTC
AACAATCGGC CATTGTAATT CTTTTGTACT GTATCAAAGT GTTTTATAAT ACCTGTGACA TGGCATTTTA ATTTTTATCT
GTAGTTATTT ATTACTTTTG TAATATTAAG AACTAATATA TCTTCTTTTT TTCATTTCAA TTGTTTGAAT TTCGATTTTT
ATGTGCATAG AAGGTGGAGT TTCAATCATT CCGTGTGGTT CTGATCGTGT CAGCATCATC GATAAAGTCT GTTTGTTAGC
ATTGATACTG AAATTAATTT GTACATTCTC AACTTACAAA CCTATATATT GTAACTGCAA AAACACAAAA CAGAAAAGAG
TTTTTCTCTT TTTATCCTTT TA

>Vigan.03G049800.01
GAATAAAAAG CAATTATCAT AGTGACTGAG GTTGCGTTTC TCCGTTCTCA GTGAAGTCTT CTCCTTCAAG AAGACGAAGA
ATTAGAAGAA AGAAGGGTTT GCAGTGCAAG CATGGATGAA GCTGAATTTC AACGCCTTCT CCAACTCTTC CCCGTTGTTC
GTTGTCGCGA TTACTCTGCA GAAGCAGCGT CATCCAGACA AATTCCATCT GGGGTAGCAC AGAATGAGGT AAAGCAATGG
CAAGATGCAT GGGATGAAAA GGAAATTAAC GATTCTGAGC AGCAAGGACT TGATCAACAT GATTCATTTT GGAGCAAGCT
AAAGACGGAG GCTGCTAGGA AGATGGATGC AGAAGAAGCA GAGAGATTTT GCAAGGCATT CCGACAAATC CATAAGAAAC
TAGTGAATGA AGAGTTGAGT TTAGATGCAG CTCGAAGCTT CTTAAAATCA TCCTAGAGTT CCAAAGAATA TGCTTTCAAC
ATTTTCCTTG TGATTCAACA ATCGGCCATT GTAATTCTTT TGTACTGTAT CAAAGTGTTT TATAATACCT GTGACATGGC
ATTTTAATTT TTATCTGTAG TTATTTATTA CTTTTGTAAT ATTAAGAACT AATATATCTT CTTTTTTTCA TTTCAATTGT
TTGAATTTCG ATTTTTATGT GCATAGAAGG TGGAGTTTCA ATCATTCCGT GTGGTTCTGA TCGTGTCAGC ATCATCGATA
AAGTCTGTTT GTTAGCATTG ATACTGAAAT TAATTTGTAC ATTCTCAACT TACAAACCTA TATATTGTAA CTGCAAAAAC
ACAAAACAGA AAAGAGTTTT TCTCTTTTTA TCCTTTTA

>Vigan.03G049800.01
ATGGATGAAG CTGAATTTCA ACGCCTTCTC CAACTCTTCC CCGTTGTTCG TTGTCGCGAT TACTCTGCAG AAGCAGCGTC
ATCCAGACAA ATTCCATCTG GGGTAGCACA GAATGAGGTA AAGCAATGGC AAGATGCATG GGATGAAAAG GAAATTAACG
ATTCTGAGCA GCAAGGACTT GATCAACATG ATTCATTTTG GAGCAAGCTA AAGACGGAGG CTGCTAGGAA GATGGATGCA
GAAGAAGCAG AGAGATTTTG CAAGGCATTC CGACAAATCC ATAAGAAACT AGTGAATGAA GAGTTGAGTT TAGATGCAGC
TCGAAGCTTC TTAAAATCAT CCTAG

>Vigan.03G049800.01
MDEAEFQRLL QLFPVVRCRD YSAEAASSRQ IPSGVAQNEV KQWQDAWDEK EINDSEQQGL DQHDSFWSKL KTEAARKMDA
EEAERFCKAF RQIHKKLVNE ELSLDAARSF LKSS*