GBrowse Details

Vigan.03G034500.01

Basic Information:
Name: Vigan.03G034500.01
Multiple alignment
Variant Information
Position: Chr03:2655102..2659397 (- strand)
Length: 4296
Functional Information:
Description: Similar to hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like. [XP_003545077.2, Glycine max]
GO: Biological Process: ubiquinone biosynthetic process (GO:0006744)
Molecular Function: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity (GO:0008425)
InterPro: Ubiquinone biosynthesis O-methyltransferase (IPR010233)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:9.88,8.53,4.67,5.14,5.30,10.74,3.60,3.80
Arabidopsis thaliana homolog: AT2G30920.1
Automatic updates:
Name: NM_001254325 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max hexaprenyldihydroxybenzoate methyltransferase, mitochondrial-like (LOC100783802), mRNA; nuclear gene for mitochondrial product.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr03:2655102..2656346 (- strand)
Length: 1245
Type: three_prime_UTR
Position: Chr03:2656347..2656556 (- strand)
Length: 210
Type: CDS
Position: Chr03:2656662..2656811 (- strand)
Length: 150
Type: CDS
Position: Chr03:2656974..2657023 (- strand)
Length: 50
Type: CDS
Position: Chr03:2657679..2657727 (- strand)
Length: 49
Type: CDS
Position: Chr03:2657859..2657936 (- strand)
Length: 78
Type: CDS
Position: Chr03:2658155..2658233 (- strand)
Length: 79
Type: CDS
Position: Chr03:2658693..2658782 (- strand)
Length: 90
Type: CDS
Position: Chr03:2658992..2659203 (- strand)
Length: 212
Type: CDS
Position: Chr03:2659204..2659397 (- strand)
Length: 194
Type: five_prime_UTR

>Vigan.03G034500.01 class=Sequence position=Chr03:2655102..2659397 (- strand)
AATAAGAACT ACAAAAACAC ATTATATCAC GAGACTAAAA ATTTAATTAA GTCAATAATT TAAAAATTAA TAAAACAGTA
ACCCGATTTT CACAATCGGG TCAAAACAGG AGCCCCGACA AGTCCACAGC CGCGGATCTA TCCAGCTGAA GGGTTCAGGA
AAGAGAGGAA GATTTTGAGC ACGGGATCAT TGCAATGGCC ATGGCTGCTA ACCATCTCCG AAACTCGACT CGCAGCTCTC
TCCACCGCAT TCTCCATCAC CGTTTTCAAC CTCTCCTCAA TGCTGCTAGG TTTTTCTCCG ATGCTGCTTC TTCAATGCCT
CAACCGCAAC CTAATCAGCA ATCTCCGCCT CCTTCGTCCT TGAAGGATTA TGAACTCGCC AAGTTCGCTG CAATTGCTGA
TTCCTGGTGA GCTTTCAAAC AGAAAGAGAG AATTTGTTCA ATGAATTTAT GGCTACAGAC ACAACACGAA ACTGAATTGT
ACAATTTTTT TTTCAAGGGG TGAATTTGTT TAATATATAT TGACGTCGCT GCTACCGCGT GCATGATTTT TCTGTGTATG
TGTGTTAGTT TGGGAATATG GATGACATGT TTTGCCCTTT CCTTGATGCT TATAGGTGGG ATTCTGAAGG TCCCTTTAAG
CCATTGCATT TGATGAATCC TACGAGACTT GCTTTTATCC GTTCTGCATT ATGTCGTCAT TTTAAGTAAG TCTCCTCTTT
CTTTTAGTTC TTTTTATGTC CATTTTTTGG GTTTGGGGTG TTTATTGTTG AAGCTACTTT AGTTAACGAT CTGTACAATG
TTTTAATTGA TTCCAAACAA CTTTTGTAAT CTATTAACTT CATGAATTAT TCTTATAGCA GTGTCATTCT TGTAGCTGTT
ATAACTTATT AATCCAATAG TAGCACTAAG CATTTGCCAC ACATACATAG TAGAGATTTG GTTTAGTATT CTCCGAATAA
AATATGATCT CACGAGGACG TGTAAGAAGA TGACTGAAAT GAGGTATTGT TAGTAAAAAA GTGTTAACTG AATTGGTTTT
TTACACATAC CAAAGAGGAA ACAACAAGAT AAACGAAAGA AAAAAGTTAT TACTTAATAG GTTAGTATTC TAATTTTGTC
TCTTCGGACT TCTATTCTAA TGATAATTAG TTTTCCCTTG TCAGGAAGGA CCCTTATAGT GCTAAACCTC TTGAAGGACT
TAAAATTGTT GATGTTGGAT GTGGAGGTGG AATTCTTTCT GAGGTATATC TATTCTCTTA TTTCTTGTGA TGTTTGGAAA
AAGACCTTTT CCTTTTTTGG TCTCCTGGCC TATGATAAAC CAATATTGGT TTAATCAGTT CAGACTTCAG AGATGACTAT
ATATATTTTT TAAGATTGTC AGTTGTTTTT CATTGCAAAT TTTATGCTGT TTGTTATGGT TATTTTATGA TTTATAGCTT
TGTTTCTCTT TTGTTCGTCA GCCACTAGCT CGATTGGGAG CTAATGTGAC GGGTGTTGAT GCTGTTGAGA AGAATATCAA
GATTGCTCAA CTTCATGCTG TATGTATATT CTGTAACTGG CCTTTCCTCC AAGTTGATTA GGTTATTGTT CATCGGTGGA
AGCAGTTGCT AACTTTACAT CTTCAGATTC TTCACTATTA GCTAGACAAC TTATTATTTC CTGTAATCAG GGTTTGGATC
CAGTAACTTC AACTATTGAA TTTTGTTGCA CAACGGCCGG TATACATGCA AACCTTGCAG CATTCTTGAA TACTTATGTC
TTACATCCAT GAAGTGCATG CTTCAAGTCT TTTACATCCA TGGATTGCAG ACCTTTGTTG GATATGATGC ATGAGCATAA
AAAGCTTAAA TATTTGCACT TCCTACTGGC TTTTGTTTTA TTGGGCTTCT TCATTGGTTG TCATTCTTGC TGCTTGCAGA
AAGTAACCAT TATTTATTTA ACTTATAGTG CATCTTTGGC TTTAGAAAAA TCATTTTTTC CCTTTGGTTT CGTTTCTTCC
TTCCCACTAG TATCTTTTAT TGAAGAAAGT TTTATATCCA TCCCTTGACG TTTCTCATGA AACAAGGTGT CAACTTGGAC
GTACTAAACC GCTCAAGTGG GAGAACAGGT TTTCAACTAA AAGAGTCGTT ACACGTACTT ATCACTTCAT CCTCTCTACA
TCACAAGAAT TATAGGTCTC AGTGGCGGTG TCCATTCAAT TTCTTTGCTT GCAATTAGGT ATCATGCTAG TAAAAACTTA
AATGGTCTGT GTACGTCAGG GCATGCATTT TGCAAGTGTA GGTTGCATTC TATAATTGTC CTTATGGTTT TTCTTTTTGT
GAATTATGCA CTGTATTTTA CAAATCACCA ACAATTTTTA AATTTATCGA TCAGAGAAAC TAGTTGAAGA AGGAAGAAAA
TTCGATGCCG TTATGGCCTT GGAGGTACTC TCTCATTTCC CCCTTCCTCT CTGTATGCTT GAATATTGCA GTGCATAAAT
GTGATCTTGA GCTATAAAAA AACGATGCGT GTATCCTACA GTTGTATAAA TCTTTGATAG TATTACTCAG GCGGCGTTGG
TTCATTTGGT TCGAATTTTT GTTCAGGTGA TTGAGCACGT GGCAAATCCT GCAGAGTTCT GCAAATCTCT TGCAGCACTA
ACAGTTCCTG ACGGCGCCAC TGTGATATCG ACCATTAATC GTTCTATGCG AGCCTACGCA ACTGCCATTG TTGCTGCAGA
ATACATTCTC CGCTGGGTAT TTATCATTCT CAACTTCCTT CCACACGCTT ATTCTCTCAT ACAAAACTCT TTGATGCTTC
AATTCAATTG ACACACTAAC TTCGCGTTCG AAACTCGGCA GCTTCCGAGA GGCACTCATC AATGGTCCAG TTTTCTGACG
CCAGAGGAAC TCGTCCTCAT CCTGCAACGC GCCGGTATCA ATGTACGTAC ACGAAAGGAA CTCATAATTC ATAAACAATT
TCATTTGCCA GGTTTTAGTC ATCGCCTACT TCATTTGTTG CATTGGACAT ACAGGTGGAG GAGATGGCCG GATTTGTGTA
CAACCCGGTG ACAGGACGGT GGTCTTTATC AGACGATATC AGCGTAAATT TCATCGCCTT CGGCACCAAA TCAAACAACA
CCGAATAGCA AGATATATAG ATAAAATAGC ATTACTATTA GTACTGTTAT ATTATTATAA TTGAAATTGT TTTTGAATGG
CGAATAATAA TATCCGTGAA ATTGGAACAA TCAGGGAGTG GAGGGAGAGA GTTTCCTGAG AGTGATAGAG GTGCGTTTGG
ATTGAGTCAA CTGTCGACCC TGCCATATCT GAAACTCCGG TGAGCGATTA ATTTCGTGTT TCCAATGGTA GCGTGCTTCT
CCGGACATGA GGATCAATGA GCCAGGGGTG AGGAGAACGG GAACGGAGAG GGAGGCGTTG GTGAAGTGCA TGACGCAGTC
GGACTCGAGG GAGAGGATGG CGATGCCGTC GTCGAAGCGG AGGAGGTCGA CGTGGGCGCA GATGCCTTCG CCGGGCTGGT
AGACGTTGGC GATCATCTGG TCAAAGAGGG GTTCTCTGTG GAGGATGTGG GGCGGGAAGG GGGGTGGGTT ATGGGCCTGG
AGGCGGATGG AGCGGCGAAT GGAGTGGGCC AGAGGAGGGG CCCAAGAAGG GAGGTGTTGG AGGCCGAAGC GCATGGCCTG
GTTGATGGAG GGAGAGGGGA ACCAGTTTTG GGATTGGATG GATGCGAGTA TACGGGATTG GTGGCGTGGA GAGAGGAAAT
TGGGACACAG CCATAGACCC TTCACTTCTG AGATTGACTC CCACTCCCAC TCACCTTCCC TTTCGCCGTC GCTGTAGCCG
TCACTGCCAT CAGATTCCTC GGATGAAGAC CCGAAGATTT GTTCCAACAC CGCCTTCTCC TCCTCCTCCT CTTCCCTCAT
CTTTCTTTCT TCCACTTCTC TTCTCTTCTC TTCCCAGTTC CTGCAGATTA AGTCTTCTTC CCTTCCTCTT CTTCAATTCA
TGCATGCTCG ATTTTTACCT TCCTTGCTGC TTTATATCAA ATGATGGAAT CAGCTATAAA TTTGATCCTC CATTCTCCTC
ACTCACCTTT TTTTTTTCTT CGGCGCACAC CTTGAAAGTA CAACATATTG CTTTGGCGGG CTGGCCCAAC ACATTATTTT
TTGTCTGAAC CAAAATATTA GATGAAAATT TCTGCACCCC CATAATTACT AACTACATTT TCATAGTTTT CAAAATAACC
ATTCTACCTG TCTTCTGGAT TATTTTTTTC TAGAACTTTT GCAAGATGAT TTTCAG

>Vigan.03G034500.01
AATAAGAACT ACAAAAACAC ATTATATCAC GAGACTAAAA ATTTAATTAA GTCAATAATT TAAAAATTAA TAAAACAGTA
ACCCGATTTT CACAATCGGG TCAAAACAGG AGCCCCGACA AGTCCACAGC CGCGGATCTA TCCAGCTGAA GGGTTCAGGA
AAGAGAGGAA GATTTTGAGC ACGGGATCAT TGCAATGGCC ATGGCTGCTA ACCATCTCCG AAACTCGACT CGCAGCTCTC
TCCACCGCAT TCTCCATCAC CGTTTTCAAC CTCTCCTCAA TGCTGCTAGG TTTTTCTCCG ATGCTGCTTC TTCAATGCCT
CAACCGCAAC CTAATCAGCA ATCTCCGCCT CCTTCGTCCT TGAAGGATTA TGAACTCGCC AAGTTCGCTG CAATTGCTGA
TTCCTGGTGG GATTCTGAAG GTCCCTTTAA GCCATTGCAT TTGATGAATC CTACGAGACT TGCTTTTATC CGTTCTGCAT
TATGTCGTCA TTTTAAGAAG GACCCTTATA GTGCTAAACC TCTTGAAGGA CTTAAAATTG TTGATGTTGG ATGTGGAGGT
GGAATTCTTT CTGAGCCACT AGCTCGATTG GGAGCTAATG TGACGGGTGT TGATGCTGTT GAGAAGAATA TCAAGATTGC
TCAACTTCAT GCTGGTTTGG ATCCAGTAAC TTCAACTATT GAATTTTGTT GCACAACGGC CGAGAAACTA GTTGAAGAAG
GAAGAAAATT CGATGCCGTT ATGGCCTTGG AGGTGATTGA GCACGTGGCA AATCCTGCAG AGTTCTGCAA ATCTCTTGCA
GCACTAACAG TTCCTGACGG CGCCACTGTG ATATCGACCA TTAATCGTTC TATGCGAGCC TACGCAACTG CCATTGTTGC
TGCAGAATAC ATTCTCCGCT GGCTTCCGAG AGGCACTCAT CAATGGTCCA GTTTTCTGAC GCCAGAGGAA CTCGTCCTCA
TCCTGCAACG CGCCGGTATC AATGTACGTA CACGAAAGGA ACTCATAATT CATAAACAAT TTCATTTGCC AGGTTTTAGT
CATCGCCTAC TTCATTTGTT GCATTGGACA TACAGGTGGA GGAGATGGCC GGATTTGTGT ACAACCCGGT GACAGGACGG
TGGTCTTTAT CAGACGATAT CAGCGTAAAT TTCATCGCCT TCGGCACCAA ATCAAACAAC ACCGAATAGC AAGATATATA
GATAAAATAG CATTACTATT AGTACTGTTA TATTATTATA ATTGAAATTG TTTTTGAATG GCGAATAATA ATATCCGTGA
AATTGGAACA ATCAGGGAGT GGAGGGAGAG AGTTTCCTGA GAGTGATAGA GGTGCGTTTG GATTGAGTCA ACTGTCGACC
CTGCCATATC TGAAACTCCG GTGAGCGATT AATTTCGTGT TTCCAATGGT AGCGTGCTTC TCCGGACATG AGGATCAATG
AGCCAGGGGT GAGGAGAACG GGAACGGAGA GGGAGGCGTT GGTGAAGTGC ATGACGCAGT CGGACTCGAG GGAGAGGATG
GCGATGCCGT CGTCGAAGCG GAGGAGGTCG ACGTGGGCGC AGATGCCTTC GCCGGGCTGG TAGACGTTGG CGATCATCTG
GTCAAAGAGG GGTTCTCTGT GGAGGATGTG GGGCGGGAAG GGGGGTGGGT TATGGGCCTG GAGGCGGATG GAGCGGCGAA
TGGAGTGGGC CAGAGGAGGG GCCCAAGAAG GGAGGTGTTG GAGGCCGAAG CGCATGGCCT GGTTGATGGA GGGAGAGGGG
AACCAGTTTT GGGATTGGAT GGATGCGAGT ATACGGGATT GGTGGCGTGG AGAGAGGAAA TTGGGACACA GCCATAGACC
CTTCACTTCT GAGATTGACT CCCACTCCCA CTCACCTTCC CTTTCGCCGT CGCTGTAGCC GTCACTGCCA TCAGATTCCT
CGGATGAAGA CCCGAAGATT TGTTCCAACA CCGCCTTCTC CTCCTCCTCC TCTTCCCTCA TCTTTCTTTC TTCCACTTCT
CTTCTCTTCT CTTCCCAGTT CCTGCAGATT AAGTCTTCTT CCCTTCCTCT TCTTCAATTC ATGCATGCTC GATTTTTACC
TTCCTTGCTG CTTTATATCA AATGATGGAA TCAGCTATAA ATTTGATCCT CCATTCTCCT CACTCACCTT TTTTTTTTCT
TCGGCGCACA CCTTGAAAGT ACAACATATT GCTTTGGCGG GCTGGCCCAA CACATTATTT TTTGTCTGAA CCAAAATATT
AGATGAAAAT TTCTGCACCC CCATAATTAC TAACTACATT TTCATAGTTT TCAAAATAAC CATTCTACCT GTCTTCTGGA
TTATTTTTTT CTAGAACTTT TGCAAGATGA TTTTCAG

>Vigan.03G034500.01
ATGGCCATGG CTGCTAACCA TCTCCGAAAC TCGACTCGCA GCTCTCTCCA CCGCATTCTC CATCACCGTT TTCAACCTCT
CCTCAATGCT GCTAGGTTTT TCTCCGATGC TGCTTCTTCA ATGCCTCAAC CGCAACCTAA TCAGCAATCT CCGCCTCCTT
CGTCCTTGAA GGATTATGAA CTCGCCAAGT TCGCTGCAAT TGCTGATTCC TGGTGGGATT CTGAAGGTCC CTTTAAGCCA
TTGCATTTGA TGAATCCTAC GAGACTTGCT TTTATCCGTT CTGCATTATG TCGTCATTTT AAGAAGGACC CTTATAGTGC
TAAACCTCTT GAAGGACTTA AAATTGTTGA TGTTGGATGT GGAGGTGGAA TTCTTTCTGA GCCACTAGCT CGATTGGGAG
CTAATGTGAC GGGTGTTGAT GCTGTTGAGA AGAATATCAA GATTGCTCAA CTTCATGCTG GTTTGGATCC AGTAACTTCA
ACTATTGAAT TTTGTTGCAC AACGGCCGAG AAACTAGTTG AAGAAGGAAG AAAATTCGAT GCCGTTATGG CCTTGGAGGT
GATTGAGCAC GTGGCAAATC CTGCAGAGTT CTGCAAATCT CTTGCAGCAC TAACAGTTCC TGACGGCGCC ACTGTGATAT
CGACCATTAA TCGTTCTATG CGAGCCTACG CAACTGCCAT TGTTGCTGCA GAATACATTC TCCGCTGGCT TCCGAGAGGC
ACTCATCAAT GGTCCAGTTT TCTGACGCCA GAGGAACTCG TCCTCATCCT GCAACGCGCC GGTATCAATG TACGTACACG
AAAGGAACTC ATAATTCATA AACAATTTCA TTTGCCAGGT TTTAGTCATC GCCTACTTCA TTTGTTGCAT TGGACATACA
GGTGGAGGAG ATGGCCGGAT TTGTGTACAA CCCGGTGA

>Vigan.03G034500.01
MAMAANHLRN STRSSLHRIL HHRFQPLLNA ARFFSDAASS MPQPQPNQQS PPPSSLKDYE LAKFAAIADS WWDSEGPFKP
LHLMNPTRLA FIRSALCRHF KKDPYSAKPL EGLKIVDVGC GGGILSEPLA RLGANVTGVD AVEKNIKIAQ LHAGLDPVTS
TIEFCCTTAE KLVEEGRKFD AVMALEVIEH VANPAEFCKS LAALTVPDGA TVISTINRSM RAYATAIVAA EYILRWLPRG
THQWSSFLTP EELVLILQRA GINVRTRKEL IIHKQFHLPG FSHRLLHLLH WTYRWRRWPD LCTTR*