GBrowse Details

Vigan.02G325500.01

Basic Information:
Name: Vigan.02G325500.01
Multiple alignment
Variant Information
Position: Chr02:44222443..44227165 (+ strand)
Length: 4723
Functional Information:
Description: Similar to Uncharacterized protein. [I1MGK8, Glycine max]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:26.23,14.58,19.45,4.98,64.36,11.10,19.42,14.50
Arabidopsis thaliana homolog: AT4G15790.1
Automatic updates:
Name: NM_001250587 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306099 (LOC100306099), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:44222443..44222694 (+ strand)
Length: 252
Type: five_prime_UTR
Position: Chr02:44222695..44222730 (+ strand)
Length: 36
Type: CDS
Position: Chr02:44222818..44222856 (+ strand)
Length: 39
Type: CDS
Position: Chr02:44222943..44222996 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44223120..44223173 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44226580..44226633 (+ strand)
Length: 54
Type: CDS
Position: Chr02:44226708..44226779 (+ strand)
Length: 72
Type: CDS
Position: Chr02:44226897..44227019 (+ strand)
Length: 123
Type: CDS
Position: Chr02:44227020..44227165 (+ strand)
Length: 146
Type: three_prime_UTR

>Vigan.02G325500.01 class=Sequence position=Chr02:44222443..44227165 (+ strand)
ATAAGAGGCT TTGCAACTTG GTTGTGTATT TCCAAATCCC GCCCAATTGG ATATCTTTAT CCTTGTTTTT TCAAAATTTG
TGCTCGTTTC TTGTCTGTTG TGACTTTAAC GTTGGTGTTT CTTTCTAGAG TCTTGTTCGG AACACTCACC AAACCACGCT
CCTCTTCAAA TTCATATATA CCCAGACAAA CCCTAGAACA ACAAACAATA CAAAACAAAT CCTCTTTTCC CAAATCTTCC
ATCCCATCCT CAATGGCCAA CTCAGATTCA TCTCTTCCTC TATCCACCGT GTGTTTTCTT CTCTTTCATC ATTTTTCCAA
TTCAATCTTT TATTGCAATT CTCAAAATCC CTTCTAATTT TGTTTTCCTT TTCAGAAGAA GGAGAACGTC ACTCCCGTTA
CGTCTAAAAT CGCGGTATTT TTTTTTCTTT TTTTACATTT TCTTTTTATT CGTAAAATGG AACTCACAAC CGCGTCTAAA
CCTTCTTTGT GTTGTTCCAG GAACTTAATG AATCGAGATC GGAGCTTCTC GGAAGAATTC AGAGTTTGAA AAAGGTTTTT
TTTTCTTAGT TGTGCATTGT TTGTTAGCTA TGAAGATTAT AGTTCACTAT TCTACCTGCT GGTTTGCTGC TGCTGCTTTT
TTTTTTTTTT AATTTGTTTC TTTGGATCTA TTTGTAGGAT TTGCAAAGTT GGAGGTTTAA ATTAGATACA CAAGTCAAGG
TCTATCGCGA TGTAAGTGAT GATGATGATG ATGATTGATC CATGTTTGCG AAACACTGCA TTTTTGCTTT ATAGTGTCGT
CTGAAAAGGA TTCCTTGGAG TTCTTTGCGT GTTTGGGTGT ATTCTTGAAA TAGAAGAAAT TAAATGATTG ATTATTCTGG
TATAGACAAT CTATGGCTTA ATTTATTATA TATTAAAGAG ATGATAAAGT ATCACCAACT TAATGTTTAA CTGAATTTTC
TTTATTTTTT TTAATGTCAT GTAAACTTCT CAACTTTTTT CCTCTTTCTA AACATATATT GCCGACCTGA AATTCAGACA
TAGTTTTGAA CTGCAGTTTC GTCTTGATCT TTGACATTGT GGTCAATTGC TGTTGCAATA TGGCTGTGGT GACAAAACAC
ACCTTTACAC TGCAGTCCCC ATTGCGATTG CAACCCACAA TTTAAACCAT GATTTCGTGT AGTTTTGAAG ATGGCGTTTT
GGGACCAAGT TGTATCATAC TGGATGAGGA TGACTACATA TCGCACGACA ACATTCAACT CAGTTATTAA CGAAAGCTTC
AAGAAAATAT TTATCAGGAG GTCTCCCTTG ACAAATTCCT CCGAAGTTCT TCTTGGTTTC CCTGTTCTTG TTTTTTAACT
GGATTAAAAT TCATGCAATC CACTCTATTT GGTGGTGCCA AAACCTACTC TTTTCGCTTG CGTGTCTCTT GTGATCTTTT
TGTACATGTC CAAATTATCA TATCTAATCT TCTGTCATCC TTTTCTCAAT CATTGGTATC CCAACCTTAC TGATTTTCTT
TTTCTGTATG TGTATAATCA ATATGTATAT CGTCCTTTCT CATTGGTTAC ACATTCTTAT TTAACAATCA CATTTTTTCC
ACTCCCACCT TTCTCTCATG CTGTTCATTT TAAGTCTACC ATTCCCTATC ATATAGGGTA TGTTTGGGCA AACTTTTTCC
TAAACATTTT TAGGAAAGAA AAAAAAATGA AAAGAGTTTT TCTGTAAGTT ACAATTAGTT TATACGTAAC CCAATTTGTG
AAAGTTCTTT TGTGTAGCTT GTCTAAATTC TTATTTTTAA CTTGTGCATA AACTACTTGT ATTTTAGAGA AAATCATTTT
GTTTTTTCCT TTTTATTTTT CTCTACTAAA AGTGTTTATG AATAAACATG TCCAAACAGA CCCATAGTAT AGCAACACGG
TAAAACTTGT TTGAGTTTAG TAGATGCTTT TAGATCATGA ATAACTCTGG ACGTCTTTCT CCATGTTAGC TATACCAATA
GTGTAACAGT ATTTTTCCAT TTTTTGTAAT TGCATTTGAG GCTATTATGT TTGATTTGCT TGTAGAAAAC TAGCAACTTG
TTTTTTCTTT CGTAATTTTT CTTTGTTATT TGTTTTCTTT GTCAGGACTT GTATTCTGAT CAAATAAAGT TTCATTCAGG
GTGCACATGA AACAGTCTAT GATATGCAAA CTTATTTTCG CATCATGATT TTTGTGCTTT TAAAGGCAAT TATTTGGTGT
GTTCCATGTG TGTATCAACT CATTGTTGAT GTGTGGTTAA ATGCTTATAT TGGGTATGCA TAACCATGTA CTGACGTGGG
AAATGGCACA ACTGTAATGT ACCAATTGGT TGTTTCAACA CTCGCCTGAC AATTACATAA CATATGTTTT TAATTTTATA
ATTAACTTGA TTAGGCATTT CTTGTGCCAA ATCTATTGTG TATCTGAAAG GAAACCTTTG GGTCTGCAAT TTAAAGCATT
GGCCTTCCTT ATCCTTATCT TAACACTGAA GTTTGTATTT TGATTTCTGT CAATGCTAGA AATGCTAAGA TCACCTGGTG
AACCATTGCT TTCAACAAGT GTAAGGAGTT CTGGAGTTGG TACGGTGCAC CCTTGAGTGT CGCTGTAAAG AAGTGATATT
CAGATAATCT ATACTAGATT TTACATCTGT CACAAACTTA TTATTCTCAA TCTAAACGGC ATTGGATTTG TTAATTCATC
TTAACAAGAT TTCCCAATCA TTTTCCGTAT TTCATTTCAC GCTTACATAT TACAAGTCAT GTTATGTGGC TCTCTTGATC
TTCCTTTTTC TGTTTCATTA TTTGTCTCCT TAAGTTCCCT CCCTTTTCTA TTCCTTTGTT TCTATGCTCT TGTGTAATAA
ATTCCAATTT TTATAGTGTC CTACTTCACT TCTATTTTTT GTAAGCTATG TTTGTTCCAA GAAAAATTCT ATGTCCTGAC
CCTTGCTTCA TGTATCAAAA TGCAAGAGTT CCTTTCGGTG GAGAATGTCT ACGATAAAAC CAGGAGCTTT TCTGGTTTCA
CAAATTTTAG TTTTGAGGAT TTGAAAACAC TCAATCCTCA TTCAAACAAA GTTACCTTTG TTTTGATCTT TATTATTTCA
CATTGTATAG GATTATTTTT TATCCTATGT TCTGTTCATT CTACTTCCTT AGATCTCCCA GTTCACATTA TGCTATTTTT
TTTATCTAAT TTGCTATATT ATTTTTCTAT TCATTATGCC ATCATCTTCC ATTGTTTTAC ATTTTTACTA TATTCTTATT
GCTTCTGTAT TGATGGTGAT TGTGTGCGTA AACATGACTT CAATTTTATC TGTAATTCCT TTCTTTGTTT TTTTAGTATT
TCTGTCAAGT ATAAAATCAG GTTGTATTAT CATATTTAAA ACGGTGGTCA TACAACTATT GATTGTGCTT TCCGAGTTAG
CTACTGTGTC ATATAGTCTT CACAGGACGT GGAAAGCCCT TACCTTTGAC ATTGATTCTA TGAGGTTGGA TTAGTTTCTT
AGCCCAAATT CCAAGAACAT GTATGAAGAC TGAAGATATT ATATTCAGTC GTTAAAAGTA ATTTACAATT TGATCCTTAT
ATTTCATAGT AGTTTCACCA CTATTTCTTG GTTTTGGTTG ACAGGCAATA AGAACTTTGT GTAACTAGTA CATTTTTTTT
TCTATTGGAC CAAGTTCATA GTGTGTAATA AATGTATACT ATGTAGGACC TAAAATATAT TTGTTTTTTC TCTAAGTGTA
GTAAGTTGGT GAAAAATCCA TTTATTGGAT GCGCGTATAC ACTTAACCTT CAGAGTAGAA CAACCAACAA GAAATCTGAT
ATTTTATTAT GCTGGTAGAT ATGCATTTAC ACGTCATTTA TTTGCTCTAC TTTCGTAAAT GAAATGATTT TTTATGGTCC
ATGGTTGTAT TTATCATTAT TTTGCTTAGT TCAGACACGG TCCACACATG TAGTTATAAC TAAAGATTTA ATGAACAATA
GGTTTACTGT ACTCGTGTTT TTCTGGTTAT ATTGATACGT AGCCGAACTC TCTTTTTATT ATTGCTGGTT TGGATGTTAC
TTCAGCTTCA CCCTAATTTT ATATGTAACT TCTAATGGCT TTTCATTTTT CATGCAGGAG CTGTCAGAAC TTAAGAAAAC
ACTTAATGTT GAAGTGGACC AACTTCGAGT AGTAAGTATG CTTTTAAGTT TTTTCTGTCA ACTAAGTTTT GTCGCTTGAA
ACTTTGTTTA TGAAATCAAA ATCAGGAATT TCAAGATTTG AGGGCTACCC TTCAGCAGCA ACAAGAGGAT GTTACTGCTA
GCTTAAGAAA CTTGGGGGTA AGTCTTGGAA GAATCATTTG ACTCTACAAC TTATGGGTCT TTTTTTGAAA AGTTCTTGCC
AGATGACGTT GTATTTCTTT TATTAAATGC ACCAACATCA ATGAATGATT GCAGCTTCAG GATGCCTCAG ACGTCAAGCA
TGCTCCAGCA CAGGAGACAA AGATTGAAGA AGTTGACAAA GAAGAACATG AGGTGGTAGC AGGAGAAGAT AATAACATTG
AAGTAGCTGA AAATTAAACG GCCTTTAATT TGGAGTATTA GTGTTACACC CTGGATAAGC AGAATGACTC TGCAGTATTG
TTAGATATTT GATGTGTTTC ATTACTACTA TTGGTTGTAA TATAGAACTT TAAATCAATG GTAAATTTCC CGTTACCCCT
CCT

>Vigan.02G325500.01
ATAAGAGGCT TTGCAACTTG GTTGTGTATT TCCAAATCCC GCCCAATTGG ATATCTTTAT CCTTGTTTTT TCAAAATTTG
TGCTCGTTTC TTGTCTGTTG TGACTTTAAC GTTGGTGTTT CTTTCTAGAG TCTTGTTCGG AACACTCACC AAACCACGCT
CCTCTTCAAA TTCATATATA CCCAGACAAA CCCTAGAACA ACAAACAATA CAAAACAAAT CCTCTTTTCC CAAATCTTCC
ATCCCATCCT CAATGGCCAA CTCAGATTCA TCTCTTCCTC TATCCACCAA GAAGGAGAAC GTCACTCCCG TTACGTCTAA
AATCGCGGAA CTTAATGAAT CGAGATCGGA GCTTCTCGGA AGAATTCAGA GTTTGAAAAA GGATTTGCAA AGTTGGAGGT
TTAAATTAGA TACACAAGTC AAGGTCTATC GCGATGAGCT GTCAGAACTT AAGAAAACAC TTAATGTTGA AGTGGACCAA
CTTCGAGTAG AATTTCAAGA TTTGAGGGCT ACCCTTCAGC AGCAACAAGA GGATGTTACT GCTAGCTTAA GAAACTTGGG
GCTTCAGGAT GCCTCAGACG TCAAGCATGC TCCAGCACAG GAGACAAAGA TTGAAGAAGT TGACAAAGAA GAACATGAGG
TGGTAGCAGG AGAAGATAAT AACATTGAAG TAGCTGAAAA TTAAACGGCC TTTAATTTGG AGTATTAGTG TTACACCCTG
GATAAGCAGA ATGACTCTGC AGTATTGTTA GATATTTGAT GTGTTTCATT ACTACTATTG GTTGTAATAT AGAACTTTAA
ATCAATGGTA AATTTCCCGT TACCCCTCCT 

>Vigan.02G325500.01
ATGGCCAACT CAGATTCATC TCTTCCTCTA TCCACCAAGA AGGAGAACGT CACTCCCGTT ACGTCTAAAA TCGCGGAACT
TAATGAATCG AGATCGGAGC TTCTCGGAAG AATTCAGAGT TTGAAAAAGG ATTTGCAAAG TTGGAGGTTT AAATTAGATA
CACAAGTCAA GGTCTATCGC GATGAGCTGT CAGAACTTAA GAAAACACTT AATGTTGAAG TGGACCAACT TCGAGTAGAA
TTTCAAGATT TGAGGGCTAC CCTTCAGCAG CAACAAGAGG ATGTTACTGC TAGCTTAAGA AACTTGGGGC TTCAGGATGC
CTCAGACGTC AAGCATGCTC CAGCACAGGA GACAAAGATT GAAGAAGTTG ACAAAGAAGA ACATGAGGTG GTAGCAGGAG
AAGATAATAA CATTGAAGTA GCTGAAAATT AA

>Vigan.02G325500.01
MANSDSSLPL STKKENVTPV TSKIAELNES RSELLGRIQS LKKDLQSWRF KLDTQVKVYR DELSELKKTL NVEVDQLRVE
FQDLRATLQQ QQEDVTASLR NLGLQDASDV KHAPAQETKI EEVDKEEHEV VAGEDNNIEV AEN*