GBrowse Details

Vigan.02G269200.01

Basic Information:
Name: Vigan.02G269200.01
Multiple alignment
Variant Information
Position: Chr02:37624896..37629643 (- strand)
Length: 4748
Functional Information:
Description: Similar to Heme oxygenase 1. [K9K2Z7, Glycine max]
GO: Biological Process: heme oxidation (GO:0006788)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: heme oxygenase (decyclizing) activity (GO:0004392)
InterPro: Haem oxygenase-like (IPR016053)
Haem oxygenase-like, multi-helical (IPR016084)
Haem oxygenase (decyclizing), plant (IPR016951)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:396.39,162.79,65.40,83.92,96.11,62.76,44.88,30.84
Arabidopsis thaliana homolog: AT2G26670.1
Automatic updates:
Name: NM_001317450 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max heme oxygenase 1, chloroplastic (LOC547612), mRNA.
PubMed ID: 18228149 NCBI(pubmed)
11402195 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:37624896..37625305 (- strand)
Length: 410
Type: three_prime_UTR
Position: Chr02:37625306..37625398 (- strand)
Length: 93
Type: CDS
Position: Chr02:37625581..37625688 (- strand)
Length: 108
Type: CDS
Position: Chr02:37627846..37628069 (- strand)
Length: 224
Type: CDS
Position: Chr02:37628892..37629303 (- strand)
Length: 412
Type: CDS
Position: Chr02:37629304..37629643 (- strand)
Length: 340
Type: five_prime_UTR

>Vigan.02G269200.01 class=Sequence position=Chr02:37624896..37629643 (- strand)
AGTAATTGTG TTTTTAAAAG AAAATAAAAG AGATAAGTAG TGAGTCGAAC ACATGGGTCG GGTCGAACTT AAGAAGAAGG
CACATACATA GAAATCTGCA GACATCTCCG ACAATCGTCC TTCGCTCTAT CTTTGAAAGC ACCAATCAAC ATCATTATTT
TATTATTTTC TTTATATTAT ATTTATTATT ATTCGGAATC CATCGCTTTT TCTTGAAGAT TACTGCATCA TCCATTCCTC
TTATTTTAAT CTCTGTATCG CACACACTCA CTCACGAGTA GCGTGCCCGT TCTTCTGCTG CGCCTTCACA TCAACGTTTT
CGTGCACTCA ACTATCTCCA ATGGCGTCAC TAATAGCTGT GTCGCAGACC CAATTGCTGT ATATTAAGCC CCGTTTGGTG
TCGCCGCCTC ATCAATCACG CTCCCTTTTC TTGCCAACGG GGTTACCAGC GGGAGTTCGA GGGGTCCGGG CTACCATGCC
GAGAAAGGCG GTTATTGTGT CGGCGGCGAC GGCTGAGACG CCGAAGAAGA AGGGGGAGTC TAAGGGCTTC GTGGAGGAGA
TGAGGTTCGT GGCGATGAGG CTGCACACCA GGGACCAGGC CAAGGAGGGG GAGAAGGAGG TGAAACAACC CGAAGAGAAA
GCCGTTACCA AGTGGGACCC AACTGTTGAA GGCTACCTCA AGTTTCTTGT GGATAGTAAG GTCGTTTACG ACACGTTAGA
AGACATCGTT CAAGAGGCTC CTCATCCTTC TTGTGAGTGT CGCTTTTCTC CCTGGATATT TTAGTTAAAT GGTTTTTTTT
TTCTTTTGTC TGTTTTGGAT GTGCAGTTGA TTGTGGTGTT TATTGTGAGG TCATTCTTGC GGCTGATGTG TGTCTTGCGT
TGTGGTTTTC TGTTCTACGA GTTGCACGAG TTTTATGTGA TGGTTGTTTT AACTCCAACT AATCATGAGG GCAATTAATA
ATTATTGCTG TATTTGATAG ACAAATGCTA ACTAGTGTCT CTTCTTAAGG AATTGAAAGG AAATTTGTTT CTTCTTTCAA
GTCCTTAACC AGTGCCATAC TGGTTACCAA GTGAGCTGTG GTGAATCTTA GCCCTTTTTG TTGTTTAATT CTAGAGGCTA
CTTAAGGAGT TTGAGTCTCT GCTCCTGTCT TTGGCTATTT CATTTCTTTG ATTTTTAATT TTTGCTTTGG TGTGCTCATA
TTGTGATCTT CATGAGGTCT CCCATTTTTT TATTGCTAAT ATTGTGTGCA AACGATCATC CATAGTATTT TGGGAATGAA
GGCGAGATTA TATATGTGGG TACAAGTGGG ATAGACAGGG TTACAACAAG GTCATTCGAG AGTATCCATC ACCTGATTCG
TTCATGTTTG ACTTGATGAT GCTGAAGATA AATTGATTGT AACCAATTTT TGTGAGCAAG ATTTTTCTAA TTCAGTGTGT
TTCTTGTTGT TATCCATATA GGTTGTACTA TTCTGTTACA TCTACCATAT CTACAACTGA CATTTTGGTG TCGGTATATA
TATATGTTTA AATCCAATTG TTAAATGCCC TATGCACTTC TCTTTCTTGT GTAGATGCTG AATTCAGAAA GACTGGATTG
GAAAGGTCTG AAAGTTTGAA AGAAGATTTG GAGTGGTTCA AGGAGAAAGG TTATACTATT CCTGAACCTT CTTCTCCAGG
ACTTACCTAT GCACAGTATC TTAAGGAATT ATCCATGAAG GATCCTCAAG CATTCATTTG CCACTTTTAC AACATCTACT
TTGCTCATTC AGCTGGTGGT CGAATGATTG GGAGAAAGGT AAACAATTAC ATACATGCTT AAAGAGGTTC AATTATGTTG
TTACATTTTT TTTAGAACAT CTTTGGTTGA TTGCTATTAT GGGCTGGAAC ATCAGTTTTA TGATTTATAG GCGCATTCAT
ATCTGGGGAC ATATTCTCAT TTGTCCTCTC CCTATGGATT GTTTACCACT CTATATTTCT CCTCTGAGAA TGTGAGAACA
TAATGAAGTT TTTAATGAAA TGGGAATATC TCATCTTTCC TTTACGTCTG CAATGTTTTA TGTCTGATAC CAGTAGTAGG
TATATATGAT CTGGCATGTG GCTATTTCCA CAGATATTTG CAGAATGTTG CACATATGTA CCATATGTTC TATTTTGTTA
GTATTGTCGA TGTTAATTAA TCAATAATAC TAAAGAGTGA TACACGTATA ATTAGCCTAT CACTTAAAAG AACTATAGAC
ATCTCAGTCC AGAGCTCTTT CTGAAGCATT TTGATTATAA GCTTTTCAAA AGTAAAATAC ACAATGCACC TGAACCTGAT
AAGCAATGCA ACAGCAAGGA TTAAAATTGT GCCTCTTTTA GTTTAGGTTA AACCCCTTTA GTTGTCCCTA TTTATGTGGG
ATTTTCCCAG TTTGATCCCT GTTTTTTTAA AATCCCCAAT TGAGTCCTAA AAAGTGCTAA TTTGAATCAA TTGAGCCCTT
GCCGTTAATT TGGCTTAACG GGGTTAAGTT TTTGATGAGG TTGGAGGTTG GCATGTCAAG TTTTGTAAAC GTGACATGCT
GAGAGGAATG TGCTTGTGCC GTCGTCAGCA CCATGGGCAA CCCTAGGCCG CCGTCAACCA CCCTGCCGCC TTGCCGCAAC
CTCGCCATCA CCCAACACCA GCGTCGCCGC CGCAAGACCA CCTTGTGTCG CCGTCACACA ATCAATTTAT AGCATTCCAG
CAACCATCTT CATCTTCTCC AGCAGAACCC TTGAACGAAC GCGAATCGCA ACGCTGTCCC GAGTTCGATT TCTCCACCAG
TTTGCGAACA TCTTCATCAA CCTCCCTCAC CGTCATTCAA ACACCACCCA ACACTGCAAG TCGTCGTTGT TCCCCCTGGT
GGTTTGGTTG CCCCAATTGA TGTCGTTGTT CCCCCCGGTC TCGATCCATC TCAGACCTCT TTCTTCCAGG TGCCTAACAT
TCCAACCGGT CTTGAGCCAT CGCTTGGCTT CTCCATATCG TGCTTTAACA TCTGGAATAA TTGTTGTTAT CTCAAAATAG
GAACCCCAAT TCCAAAACAG AACCAGAAAG CCATAATCCC AAAATCTCGA TCATCAACTC AAATGAAACT TACGAGATCA
AGAACACAAG AAGCAAAACT CTGACCCCAA ACGCAATTTG AGAAAACAAG AATAGAGCAC CTAGAAGAGA ATTCCTAAAC
AAGATCAAAA ACCCCAATTT GCAAGAACAA ATTGCAAACC CTAACCCCCA ATTCGTGAGA CCCAAAACTG CAGAAAAGAT
TTAAGAGAAC ACCCAAAATC GCAACAATCA GGAAACCCAA TTTCAAGCAC GATTCCAAAC ACGAAAACTC ATTCAAGCCC
TAGTCATCTT CCATTTTCTT TTTCTCTGAT AAAATGCCAA CGAAAGATAG CTTGATGTCT GAGGAAGACG ATGTCGATGT
CTGAGGAAGA CGATGAATCT TTGGGTTTCA ATTTTCAGAA TTTTCTTTTT AATAATATAT TCCACGTACA AAGGTATGAG
AATGCCACGT TTAAAAAAAT TGACACGTCA ACTTCCAATC TCAGCAAAAA CTTAACTCCG TTAAGCCAAA TTAACGGCAG
GGGCTTAATT GATTCAAATT AGCATTTTTT AAGATTCAAT TGGGGATTTA AAAAAAACGG GGATCAAACT GGGAAAAACC
CACATAAATA GGGGCAACTA AAGGGGTTTA ACCTTTAATT TATTACTAAC CATAAAAGAA AAAGAAATGA CAACAAGCTT
CTTACAAATC TGTGGGTTCC TACTTCTTTT TTTTTGGATG AAATTTGTTT ATCTCCAAAT GTAATTGTTC TTACAACACT
GGACATCCAT TAAGCTTCAC TATGTTCTAA ATATTTTGCT TTCATTATCA CTTGACGAGA TAAATGCTAA TACTTATCCT
TTCTATAATC AGTAAATTCT TCCTGCATCT TACAGGTTGC TGAACAGTTG CTTGACAACA AGGCATTAAA GTTCTACAAA
TGGGACGGTG ACCTTCCCCA GTTGTTACAG AGCGTGAGGG ACAAATTGAA TAAAGTTGCT GAAGTAAGTT TCTTTTGATT
TTCTTAATTA TTTGCATACA TTTCTTTCCA ATTGTCTAAG GAATCATCAA GAGGTTTATT TCTTTTGCGG TCTTATACGT
AATTAACAAA GGATACAGTG ATAGCTTCCA AATTTTCTTA GTTAGGGTGT TGAATTTACC TTTTTGATAT TCCTTTTTTT
AACAGGGTTG GACTAGGGAA GAAAAGAACC ACTGTCTGGA AGAAACAGAA AAGTCGTTCA AGTTATCGGG AGAGATTCTC
CGACTGATTC TATCGTGATA TTAAAGTGCC CTGCTGTATG TGCTATCTGT GTAATTATGG TTATTAAAGT GCATGGCGGA
AGCCAAGAAC ATTATATGTG AATTATTTAA TTTCCAATGC AAAGAAATAA TAGGACTGAT GTTGATTAAC TTGCTTTTGT
CAAATGGGGG GCTTTGATGG GTCCTAAGAC AAAAAAAAGG CTTCCATGAT ATTGATAGAA GCTGACTTTT ATTGATAACT
CTTGAACTTG ATCAGAAAAT TTAGAAGTGT AAAGATAAAT TTATAGGTCA GTATCTACGT TGAATTTCAA TCCTAAATCT
ACTTCCTTCT GGGATTTTCC TGTCAATTCA GGCTCCACTT GCTTTATCTA TCTTTTCCTT AAATTCTTGT TCGCTCTAAA
TCGTATATCC CTTGCCCACA ACACCACC

>Vigan.02G269200.01
AGTAATTGTG TTTTTAAAAG AAAATAAAAG AGATAAGTAG TGAGTCGAAC ACATGGGTCG GGTCGAACTT AAGAAGAAGG
CACATACATA GAAATCTGCA GACATCTCCG ACAATCGTCC TTCGCTCTAT CTTTGAAAGC ACCAATCAAC ATCATTATTT
TATTATTTTC TTTATATTAT ATTTATTATT ATTCGGAATC CATCGCTTTT TCTTGAAGAT TACTGCATCA TCCATTCCTC
TTATTTTAAT CTCTGTATCG CACACACTCA CTCACGAGTA GCGTGCCCGT TCTTCTGCTG CGCCTTCACA TCAACGTTTT
CGTGCACTCA ACTATCTCCA ATGGCGTCAC TAATAGCTGT GTCGCAGACC CAATTGCTGT ATATTAAGCC CCGTTTGGTG
TCGCCGCCTC ATCAATCACG CTCCCTTTTC TTGCCAACGG GGTTACCAGC GGGAGTTCGA GGGGTCCGGG CTACCATGCC
GAGAAAGGCG GTTATTGTGT CGGCGGCGAC GGCTGAGACG CCGAAGAAGA AGGGGGAGTC TAAGGGCTTC GTGGAGGAGA
TGAGGTTCGT GGCGATGAGG CTGCACACCA GGGACCAGGC CAAGGAGGGG GAGAAGGAGG TGAAACAACC CGAAGAGAAA
GCCGTTACCA AGTGGGACCC AACTGTTGAA GGCTACCTCA AGTTTCTTGT GGATAGTAAG GTCGTTTACG ACACGTTAGA
AGACATCGTT CAAGAGGCTC CTCATCCTTC TTATGCTGAA TTCAGAAAGA CTGGATTGGA AAGGTCTGAA AGTTTGAAAG
AAGATTTGGA GTGGTTCAAG GAGAAAGGTT ATACTATTCC TGAACCTTCT TCTCCAGGAC TTACCTATGC ACAGTATCTT
AAGGAATTAT CCATGAAGGA TCCTCAAGCA TTCATTTGCC ACTTTTACAA CATCTACTTT GCTCATTCAG CTGGTGGTCG
AATGATTGGG AGAAAGGTTG CTGAACAGTT GCTTGACAAC AAGGCATTAA AGTTCTACAA ATGGGACGGT GACCTTCCCC
AGTTGTTACA GAGCGTGAGG GACAAATTGA ATAAAGTTGC TGAAGGTTGG ACTAGGGAAG AAAAGAACCA CTGTCTGGAA
GAAACAGAAA AGTCGTTCAA GTTATCGGGA GAGATTCTCC GACTGATTCT ATCGTGATAT TAAAGTGCCC TGCTGTATGT
GCTATCTGTG TAATTATGGT TATTAAAGTG CATGGCGGAA GCCAAGAACA TTATATGTGA ATTATTTAAT TTCCAATGCA
AAGAAATAAT AGGACTGATG TTGATTAACT TGCTTTTGTC AAATGGGGGG CTTTGATGGG TCCTAAGACA AAAAAAAGGC
TTCCATGATA TTGATAGAAG CTGACTTTTA TTGATAACTC TTGAACTTGA TCAGAAAATT TAGAAGTGTA AAGATAAATT
TATAGGTCAG TATCTACGTT GAATTTCAAT CCTAAATCTA CTTCCTTCTG GGATTTTCCT GTCAATTCAG GCTCCACTTG
CTTTATCTAT CTTTTCCTTA AATTCTTGTT CGCTCTAAAT CGTATATCCC TTGCCCACAA CACCACC

>Vigan.02G269200.01
ATGGCGTCAC TAATAGCTGT GTCGCAGACC CAATTGCTGT ATATTAAGCC CCGTTTGGTG TCGCCGCCTC ATCAATCACG
CTCCCTTTTC TTGCCAACGG GGTTACCAGC GGGAGTTCGA GGGGTCCGGG CTACCATGCC GAGAAAGGCG GTTATTGTGT
CGGCGGCGAC GGCTGAGACG CCGAAGAAGA AGGGGGAGTC TAAGGGCTTC GTGGAGGAGA TGAGGTTCGT GGCGATGAGG
CTGCACACCA GGGACCAGGC CAAGGAGGGG GAGAAGGAGG TGAAACAACC CGAAGAGAAA GCCGTTACCA AGTGGGACCC
AACTGTTGAA GGCTACCTCA AGTTTCTTGT GGATAGTAAG GTCGTTTACG ACACGTTAGA AGACATCGTT CAAGAGGCTC
CTCATCCTTC TTATGCTGAA TTCAGAAAGA CTGGATTGGA AAGGTCTGAA AGTTTGAAAG AAGATTTGGA GTGGTTCAAG
GAGAAAGGTT ATACTATTCC TGAACCTTCT TCTCCAGGAC TTACCTATGC ACAGTATCTT AAGGAATTAT CCATGAAGGA
TCCTCAAGCA TTCATTTGCC ACTTTTACAA CATCTACTTT GCTCATTCAG CTGGTGGTCG AATGATTGGG AGAAAGGTTG
CTGAACAGTT GCTTGACAAC AAGGCATTAA AGTTCTACAA ATGGGACGGT GACCTTCCCC AGTTGTTACA GAGCGTGAGG
GACAAATTGA ATAAAGTTGC TGAAGGTTGG ACTAGGGAAG AAAAGAACCA CTGTCTGGAA GAAACAGAAA AGTCGTTCAA
GTTATCGGGA GAGATTCTCC GACTGATTCT ATCGTGA

>Vigan.02G269200.01
MASLIAVSQT QLLYIKPRLV SPPHQSRSLF LPTGLPAGVR GVRATMPRKA VIVSAATAET PKKKGESKGF VEEMRFVAMR
LHTRDQAKEG EKEVKQPEEK AVTKWDPTVE GYLKFLVDSK VVYDTLEDIV QEAPHPSYAE FRKTGLERSE SLKEDLEWFK
EKGYTIPEPS SPGLTYAQYL KELSMKDPQA FICHFYNIYF AHSAGGRMIG RKVAEQLLDN KALKFYKWDG DLPQLLQSVR
DKLNKVAEGW TREEKNHCLE ETEKSFKLSG EILRLILS*