GBrowse Details

Vigan.02G267400.01

Basic Information:
Name: Vigan.02G267400.01
Multiple alignment
Variant Information
Position: Chr02:37477397..37480549 (+ strand)
Length: 3153
Functional Information:
Description: Similar to IDS4-like protein. [A2TEC3, Phaseolus vulgaris]
InterPro: SPX, N-terminal (IPR004331)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.73,6.87,4.82,9.59,6.40,9.41,2.50,2.92
Automatic updates:
Name: JN201530 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SPX domain-containing protein 3 mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001353524 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max SPX domain-containing protein 3 (GMSPX3), mRNA.
PubMed ID: 25074550 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:37477397..37477647 (+ strand)
Length: 251
Type: five_prime_UTR
Position: Chr02:37477648..37477917 (+ strand)
Length: 270
Type: CDS
Position: Chr02:37478773..37478899 (+ strand)
Length: 127
Type: CDS
Position: Chr02:37479617..37480065 (+ strand)
Length: 449
Type: CDS
Position: Chr02:37480066..37480549 (+ strand)
Length: 484
Type: three_prime_UTR

>Vigan.02G267400.01 class=Sequence position=Chr02:37477397..37480549 (+ strand)
GAATAATCTG TGAATAGATA ACTAAACGAC CACGTTCCAA ACGGAAGGAA TAAAACCCTA AATATACTCT TATTCGCATT
GGATATCCAA AAACACCCAC GAATATTCTC TTCCTCGTTA CCCTTATACC AGTCACACGA TTCCTCTTCC CTCCTTTTAA
CCCCACCATT TCATTCTTCA CCACATTCAC TTTCTTCCTT TCTCAAAGTT TTTCTTTTTC TCTCTCATTT CTTCAATCTG
TTAACGTAAC CATGAAATTC GGGAAGAGTT TGAGCAACCA GATCGAGAAA ACACTGCCTC AATGGCGCGA CAAGTTTCTC
TCCTACAAGG AACTGAAGAA GAAGTTGAAA CTCGTGGAAG CCGCCCCCAA ATCCTCGGAG GAACGCCCGG CGAAACGCGC
AAGGCTCGAT GCGGACATGT CTGTGGAGGA AATCGACTTC AGGAACTCGC TCGAACAAGA ACTCCACAAA TTCAACACCT
TCTTTGAGGA GAAAGAGGAA GAGTGCATCA TCAAATTGAA GGTAGTAGAG TTTTCATTTT CTTATTTCCT CATTGCATAA
ATACCACTTC ACTCAACTCT TTTCAAGTTG TTTATTGTGT GATTTGTTTT TTTGTAAAAT ATATCGAATA ATATTAATTG
AAATTATTTA AAAGTAAACT GTTAACAAAT TGATATCTGG ATAGCTTTGG AATCTGATGC GAATATAGCA GACATAAACC
TTTATTAATA AATAAAAAAT TGTTGATATA AAACTGTAAG TAAATCATAG AAGCGTTTCA GTGTAGTTGT ATTTATGGAA
GCGGTTACCC CCTTAATATT TGTAGAGGGA TACCATGGTA ACTTTTATAG AATATTGTAA CTTAATGTGG CCTACGTTTT
TTAATATATT CACTGTAAAA CATTGTACCA CTTAAAAAAA TCGACATGAA TAATGATGAA AATAGTGAAT TCTAATTGAA
TGATTGGATT GACAAAAGTA ATCTTTTATG AGTTCATATA TATAATTTAC ATTTTGTGTT TAATATTTTT TTTATTTAAT
TTCAGTTCTA AAAATAATAT CTTGGTATTA ATTGTTATTG TTTTTTTTTA TATCTGATTA GGAAAATATT AATCATTGAA
AAATTATTTA AATTTTAATT CTATAAATTG ATATTTTCTT AGAAAAATAT TTTTTAAAAA AAATTACTAA ATTTACTAAT
CCAATCTAAT TCAATGATAA TTAGGTTTGA TTATTAATTA AAAGAAGATA AACCTTACCT AATGAATTGA AAATTTGGCA
GCACCTTTGC CCCTACTTAT TCTTAACCTT TAGCTTAATA AAGAGCACCC TAGATTTGGC GCGCAAGTAA CAGTGAGTTG
TGGTTGAAAC GTGCAGGAGC TACAAGATAG GGTGGCCAAA GTAAAAGATT CTAATGAGCA GTTAATGGAA ATTCGCAAGG
AAATTGTGGA TTTCCATGGA GAGATGGTCT TGCTCGAAAA CTATAGTGCT CTTAACTACA CAGGTACATT CAACTTTTGA
CATATTAATG TTATGTTTTT AAATAAGATT CCCACAATAG GCACTATTTT TTAACATATG AACTGAAGCA TGCTATGTAA
CTTACGGTCT GACTAAATGC AATAGAAAGT GTAGTAGTAT ATTAGAAAAA GGGTTTCGTT TCCCATATAA AGATTTTCTA
TAGATCATGA CATTTGTGTG GGCAGCTTTG TAAAACAATG AATATAAAGA ACGTTAGGAG ACAGACTTAC ATGTGTTTCC
AGTTAGATAT GTGTTTGAGT GCGGCATACT GCCTATACAA ATTACTATTT AAATTTTCAG ATGTGTGAAA TATTATGAGC
TAAAAAAAAC ATTTCGAAAT ATCAAGCATA ATTTTCATTA CTAGAGGATC AATGAGATCA AAACTTGATC TTTCAACCGA
TTTTGAGTTG AACATTTTGG TAAACCCACT GCATGAGTTA ATCACAATAA CGAATTCCAC ACTTATTCCG GCATTAAATT
TTCGGAGATG ACATCAACTA AAAGCCAAAT TGATATTTCG CCCTTTAATG TTCGGACATG GTCCTATAAC CAAAGATATA
CACAACCCAC ATGTTATGTT GGGGGATAAA ATCTGTTGCT TAAAATTGAA TTGCAGTGAT GTTTTTAATC TAAAGTATTT
TCTGCTACAA TGAAGTTTGA TTTGCCTAAG AGTCATCTCA ATGCTTCAAT TTTGTCACAG GACTAGTGAA AATACTAAAG
AAGTATGACA AGAGAACTGG TGCTCTCATT CGCTTGCCTT TCATTCAGAA GGTCTTGCAA CAGCCTTTCT TCACCACTGA
CCTTCTCTAC AAACTTGTGA AGGAGTGTGA AACAATGCTG GATCAGCTTT TCCCGGTGAA TGATCCTTCC ATTTCCGGTG
AGGCAACTCC CCAAGCTGAG GGGTGTGAGG CTTCAACTTC AACCAGCACA AAGAATAATG AGGATCCGCT GATGCCTAAA
GAGTTAGCAG CCAACCAGCA CATCGACGAG AGCCTCTACA TGAAGAGTAC CATTACAGCT TTACATGTTT TGCAGGAAAT
TAGAAAGGGA AGCTCAACAG TAAGCATGTT TTCATTGCCA CCGCTGCAGA TGAGTGGTTT GGAAGAAACA TGGAACAAAA
TCCCAATTCT GGAACAGACA GCCAAGTAAT CTACTGGATT ACAGTGGTTG ATTGAAGTCG AGTTAGTGTG CCATGAGAGT
TCACCTTTTT GTTGATTTCA AAATCCAGTT GTAACATGCC GCAGATAACA AACAACACGG ATGTAAAATG CTGAAGATAG
AGAATATATT GACACAAAAG AATTTTAGAC TCATATAAGA AAGACGAAAA ACCTTCTCCA ACTATGATCA TGTGCAAAAA
CATGTATTTA TACTTGAAGC TCACGTACAA ACACTTTTAT ACGCACACAC GTCTCATAGT TGATAAGAAT TCCTTGAGTT
CTACGCATAA ATTTAGTTTA TAATGTTATT GGGTCCTTCT GAAATCTTTG CAAGCCTTTA TCAATTTGGT TTATGGTGTA
ATGATAAAGT GTGAGTTCAT ATACTTGGGA GAGAAACTTT TCTTAGAGAA GGAAGAGAAA CTTGTTATTT GTTGTAAACT
GGATCATAAA ACAGTTGTAA AATACGATCT AGA

>Vigan.02G267400.01
GAATAATCTG TGAATAGATA ACTAAACGAC CACGTTCCAA ACGGAAGGAA TAAAACCCTA AATATACTCT TATTCGCATT
GGATATCCAA AAACACCCAC GAATATTCTC TTCCTCGTTA CCCTTATACC AGTCACACGA TTCCTCTTCC CTCCTTTTAA
CCCCACCATT TCATTCTTCA CCACATTCAC TTTCTTCCTT TCTCAAAGTT TTTCTTTTTC TCTCTCATTT CTTCAATCTG
TTAACGTAAC CATGAAATTC GGGAAGAGTT TGAGCAACCA GATCGAGAAA ACACTGCCTC AATGGCGCGA CAAGTTTCTC
TCCTACAAGG AACTGAAGAA GAAGTTGAAA CTCGTGGAAG CCGCCCCCAA ATCCTCGGAG GAACGCCCGG CGAAACGCGC
AAGGCTCGAT GCGGACATGT CTGTGGAGGA AATCGACTTC AGGAACTCGC TCGAACAAGA ACTCCACAAA TTCAACACCT
TCTTTGAGGA GAAAGAGGAA GAGTGCATCA TCAAATTGAA GGAGCTACAA GATAGGGTGG CCAAAGTAAA AGATTCTAAT
GAGCAGTTAA TGGAAATTCG CAAGGAAATT GTGGATTTCC ATGGAGAGAT GGTCTTGCTC GAAAACTATA GTGCTCTTAA
CTACACAGGA CTAGTGAAAA TACTAAAGAA GTATGACAAG AGAACTGGTG CTCTCATTCG CTTGCCTTTC ATTCAGAAGG
TCTTGCAACA GCCTTTCTTC ACCACTGACC TTCTCTACAA ACTTGTGAAG GAGTGTGAAA CAATGCTGGA TCAGCTTTTC
CCGGTGAATG ATCCTTCCAT TTCCGGTGAG GCAACTCCCC AAGCTGAGGG GTGTGAGGCT TCAACTTCAA CCAGCACAAA
GAATAATGAG GATCCGCTGA TGCCTAAAGA GTTAGCAGCC AACCAGCACA TCGACGAGAG CCTCTACATG AAGAGTACCA
TTACAGCTTT ACATGTTTTG CAGGAAATTA GAAAGGGAAG CTCAACAGTA AGCATGTTTT CATTGCCACC GCTGCAGATG
AGTGGTTTGG AAGAAACATG GAACAAAATC CCAATTCTGG AACAGACAGC CAAGTAATCT ACTGGATTAC AGTGGTTGAT
TGAAGTCGAG TTAGTGTGCC ATGAGAGTTC ACCTTTTTGT TGATTTCAAA ATCCAGTTGT AACATGCCGC AGATAACAAA
CAACACGGAT GTAAAATGCT GAAGATAGAG AATATATTGA CACAAAAGAA TTTTAGACTC ATATAAGAAA GACGAAAAAC
CTTCTCCAAC TATGATCATG TGCAAAAACA TGTATTTATA CTTGAAGCTC ACGTACAAAC ACTTTTATAC GCACACACGT
CTCATAGTTG ATAAGAATTC CTTGAGTTCT ACGCATAAAT TTAGTTTATA ATGTTATTGG GTCCTTCTGA AATCTTTGCA
AGCCTTTATC AATTTGGTTT ATGGTGTAAT GATAAAGTGT GAGTTCATAT ACTTGGGAGA GAAACTTTTC TTAGAGAAGG
AAGAGAAACT TGTTATTTGT TGTAAACTGG ATCATAAAAC AGTTGTAAAA TACGATCTAG A

>Vigan.02G267400.01
ATGAAATTCG GGAAGAGTTT GAGCAACCAG ATCGAGAAAA CACTGCCTCA ATGGCGCGAC AAGTTTCTCT CCTACAAGGA
ACTGAAGAAG AAGTTGAAAC TCGTGGAAGC CGCCCCCAAA TCCTCGGAGG AACGCCCGGC GAAACGCGCA AGGCTCGATG
CGGACATGTC TGTGGAGGAA ATCGACTTCA GGAACTCGCT CGAACAAGAA CTCCACAAAT TCAACACCTT CTTTGAGGAG
AAAGAGGAAG AGTGCATCAT CAAATTGAAG GAGCTACAAG ATAGGGTGGC CAAAGTAAAA GATTCTAATG AGCAGTTAAT
GGAAATTCGC AAGGAAATTG TGGATTTCCA TGGAGAGATG GTCTTGCTCG AAAACTATAG TGCTCTTAAC TACACAGGAC
TAGTGAAAAT ACTAAAGAAG TATGACAAGA GAACTGGTGC TCTCATTCGC TTGCCTTTCA TTCAGAAGGT CTTGCAACAG
CCTTTCTTCA CCACTGACCT TCTCTACAAA CTTGTGAAGG AGTGTGAAAC AATGCTGGAT CAGCTTTTCC CGGTGAATGA
TCCTTCCATT TCCGGTGAGG CAACTCCCCA AGCTGAGGGG TGTGAGGCTT CAACTTCAAC CAGCACAAAG AATAATGAGG
ATCCGCTGAT GCCTAAAGAG TTAGCAGCCA ACCAGCACAT CGACGAGAGC CTCTACATGA AGAGTACCAT TACAGCTTTA
CATGTTTTGC AGGAAATTAG AAAGGGAAGC TCAACAGTAA GCATGTTTTC ATTGCCACCG CTGCAGATGA GTGGTTTGGA
AGAAACATGG AACAAAATCC CAATTCTGGA ACAGACAGCC AAGTAA

>Vigan.02G267400.01
MKFGKSLSNQ IEKTLPQWRD KFLSYKELKK KLKLVEAAPK SSEERPAKRA RLDADMSVEE IDFRNSLEQE LHKFNTFFEE
KEEECIIKLK ELQDRVAKVK DSNEQLMEIR KEIVDFHGEM VLLENYSALN YTGLVKILKK YDKRTGALIR LPFIQKVLQQ
PFFTTDLLYK LVKECETMLD QLFPVNDPSI SGEATPQAEG CEASTSTSTK NNEDPLMPKE LAANQHIDES LYMKSTITAL
HVLQEIRKGS STVSMFSLPP LQMSGLEETW NKIPILEQTA K*