GBrowse Details

Vigan.02G261700.01

Basic Information:
Name: Vigan.02G261700.01
Multiple alignment
Variant Information
Position: Chr02:36744012..36748324 (- strand)
Length: 4313
Functional Information:
Description: Similar to Uncharacterized protein. [Q8W3Y5, Glycine max]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: iron ion binding (GO:0005506)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705)
Molecular Function: heme binding (GO:0020037)
InterPro: Cytochrome P450 (IPR001128)
Cytochrome P450, E-class, group I (IPR002401)
Cytochrome P450, conserved site (IPR017972)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.69,2.41,16.45,1.98,0.75,23.85,0.76 ,1.11
Arabidopsis thaliana homolog: AT5G07990.1
Automatic updates:
Name: NM_001250086 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max flavonoid 3'-hydroxylase (SF3'H1), mRNA.
PubMed ID: 22258749 NCBI(pubmed)
18423787 NCBI(pubmed)
19055742 NCBI(pubmed)
17764520 NCBI(pubmed)
12586717 NCBI(pubmed)
12175012 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:36744012..36744205 (- strand)
Length: 194
Type: three_prime_UTR
Position: Chr02:36744206..36744853 (- strand)
Length: 648
Type: CDS
Position: Chr02:36744949..36745380 (- strand)
Length: 432
Type: CDS
Position: Chr02:36747738..36748184 (- strand)
Length: 447
Type: CDS
Position: Chr02:36748185..36748324 (- strand)
Length: 140
Type: five_prime_UTR

>Vigan.02G261700.01 class=Sequence position=Chr02:36744012..36748324 (- strand)
AAAAAACGGT GAGAGAAAAA AAAAATATTT TGCTATATAT ATACCACCTA GTTTGAGCCA AACTGAAGAA AAACCCCAAC
AGACTACTTC TTCTACTACA GTTTCATTTC AAAATAGTAA CAACTGTTCC AAAACTAACC ATGTCTCCGT TCATGGTTGT
CTTCGCAACA ATCGCAGCAG CGATCCTCCT ATGTCGTTTA ATAAACTTCT TAAAGCGTTC TTCTTCTCTG CCACTCCCTC
CAGGCCCAAA ACCCTGGCCC GTTCTCGGGA ATTTCCCACA CATGGGCCCA GTGCCTCACC ACTCCCTCGC CGCCTTGGCC
CGCGTTCACG GCCCGTTGAT GCACCTGCGT CTCGGATTCG TCGACGTCGT CGTGGCGGCG TCCGCGTCGG TAGCCGAACA
GTTTTTGAAG ATTCATGACT CTAATTTCAG CAGCCGGCCA CCGAACGCCG GAGCCAAATA CATAGCCTAT AACTACCAGG
ACCTGGTGTT CGCCCCCTAT GGCCCGCGGT GGCGGTTGCT CCGGAAACTC ACCTCCGTTC ACCTCTTCTC CGGGAAGGCC
CTGGATGTAT TTAGACACTT GCGTGAGGTG AATTTTCTGT TTCCACTATA CACGTAAACT ATACATACAC ACACATATAC
ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATATACACAC
ATGCATATTT CTATTTTCAT GTAAAAAATT ATTTTATTTT TCTTCTATGA ATATTTGAGT TTATAAATTT TTATGAATTT
ATTCATAGTG TATATAACAA GGGCTTTAAT TCTATATACA CGAATTATGT GTTTTAGTTT AGATTATACC TTTTTGTGAT
GGGAAAAAGT ACATGCTAGT TTGAGGAAGT TTTATTTGGA TTTGAGTGGT TTAAAATGAA GAGACGTGTA TGTAAGTAAA
TAAAATTAAT TTTGTAAACC TTATGCTATT ATTGATAGTT TCTATTTTAC TATTTTTTGA GTTATTATTC TTAACTCTAT
GTTTTTCTTC TTCTAATTTT TTACAGAATT TAATTTAAAA TTACGTATTT TTTTTCTTTC AAACCAATAT CTTTTCGCTT
TTGACTTTTT ATTTTACTTT ATAAATTCAA CTATTTCACA CTATCAATGT AGAACTTAGT TCTTAGTCAT AAAAGCTTTT
CACCTGATTT AAGCAACAAG CTTACTTTTT TTTTCAACTC ATATTAAAAG TGTCGATTTT AATGTCAAGG CACAATTTAT
TTTCTAATTT ATTTAAAGTA ACAACCTAAT CAGTATAATT CATTTCTTTT TCAACGCCAC ATATTAAAAG TGTGGGTTTT
AATATCAAGG CTCAATTTAA TTCATAGATA CGATAACTCT TCTTAATATA AAAAACTCTA TTCAAAGCTT CTCAATTTAA
TGTCACTTAT TGCATTTGTT TTGTTAACAT TCTAAAAAAA ATAGTTTCAA GATAGTCCTT AAAAAATGTT AAAAATTGGT
CCCGAATTCA TATTTACAAA AGTTAAAAAT TACTTGTTTG TACAGAAGTA GTACAATTTT ACATTTTAGC GCAAGAAGAC
AGACCTAACC TACTAGAAAA CAAGAAGTAC AACGCAATCT ATACACTATT TTTTTTAAAA GAAGAAAATC CAGGTAATAA
TATAGTTTTA ATTTATTGTT CTTCGCTATA AAAATATTGA TAAAACAATT AATATTTTAT CACTTTATAA TAAATATTTG
AAAATAAAAT ATTTTCTTTC AATCTATCGA TTAACATATT TAAAATAAAA TAAGTTTGAA GTAAATTCAA TGCTAAAACT
ATTTTTTACT ACAAAAATAA TTACAAATAT CATTACTTGA AAAATACATG TATTAAAAAA TGTTTTGCAT AATTAATATT
ATCTAGTGCG AAATTTATTC TATTATTATT CTTTTTTGTA ATATCTCTAT TAGATAATAA TACTTGAAAG AAGGTTTTTT
GAACCGACAC GCTACTTTAA CCTAATCATG CATTACTGAT GATGCCTGTT CCCACACCAG GCTCAACTTT CATTCATCAC
AACAAAACTG TTTTCCTTTT TATGTTTACT TATTTAAGAT ATATTTTGCT TATCATTTAG AAAAAATTGT TTTTAACATA
TTTTTTTAAC ATTTTAATAT TGAAAAAAGA ATTGTGATTA GTTCGTTTTA AAAAAAAATT TAAAAATAAA TTCAAACAAA
TTAATAATAT AATAACATAT GTGACTGTTG TCAAAAAAAT TATTATGAAA AGGTTATTGA TATATTAAGG TCCTTATTTC
ATAGAGTAAA AGAAAAAGAA ATTTTCAAAA AATAAAATAA ATATGACTAT ATTTAAAATG TAATTTTTTT TCAATATTTT
TTTTTCTTTA GAAGATAAAT ATTTTTACTA ATTTACACGA GAAAAAGTGT CAACAATCAA ACCAAATCAA TTATTGTTTA
TAAAACCAAC AAAAAGAAAA AATTTGTGCT CCGTGCATGT TAGTGTTCTC TTCATATACT ACGCGGCGGC ACATTTCGAC
TTGTAGAATT TTCATGCTAA TAATTATGCA AGGCGTGTGT CACACATGGT GTGCTCGCAT CCGCGCCAAT GTTTTATTTG
CGGTCATGGG CGGCATTCAC GTCACCTTCT TACAAAAGTG TCACACACTG TAAGTGTTGC AAAACATTTG TTTTTTTTAT
TCATATTTTA AAACTTAAAA GCTTATTATT AGCAAATCTT AAATAAAATA TATCTTTTAT TATAATTTAA AGAAAATATA
TATTTAATTT TTGAAAGTAC TCGTTAATGC CATAAGATAG AGATTGAAGT TCATGTGAGT GACGTAGGTG TAACAGTTGA
CATTAATGAA GTCTGTACAT TAATAATAAA AACCTAATTG AGAAAATGAA CGACACGATT TCAGGAAGAG GTGGGAAGAC
TTACACGTAA CCTGGGGAGT TCAGAGGGAA AAGCAGTGAA TTTGGGGCAA GTGTTGAACG TGTGCACCAC GAACGCATTG
GCGAGGGTGA TGATCGGACG GCGAGTGTTC GACGACGGGA ACGGCGGCTG CGATCCTAGG GCTGACGAGT TCAAGAACAT
GGTGGTGGAG GTGATGGTGT TGGCCGGCGT TTTCAACATC GGCGACTTTA TTCCGTCGCT CGAGTGGCTT GATCTTCAAG
GAGTGCAAGC TAAGATGAAG AAATTGCATC AAAGATTTGA TGCATTTTTG AGCACCATTA TTGAAGAACA CGATTCTTCT
TCCAACAATC TCTTGAGTAT CTTGTTGTCT CTTCAAGATG CGAAGGACGA TGACGGAAAC CATCTTACTC ACACAGAGAT
CAAAGCATTG CTGCTGGTAG TAACCACTCT GCTTAATAAC TCCGATTTTT TTTTATTGTT TTTATATAAT AATCGCTCAT
GAATTGTTTT TACTCTGTTC AAATTTCGCA GAATATGTTT ACGGCTGGAA CCGACACGTC ATCGAGCACA ACAGAATGGG
CCATCGCCGA ACTGATCCGA AATCCAAGAG TCCTGACCCA AGTCCAGCAA GAGTTGGACT CTGTTGTGGG CCGAGACAGG
AGCGTGAAAG AGGAGGACTT GGCCCATCTC CCGTACTTAC AAGCTGTGAT TAAGGAAACC TTCAGGCTCC ACCCATCAAC
CCCTCTTTCT CTGCCACGTG TCGCTGCCGA GAGCTGCGAG ATATTTGGGT ACCACATTCC TAAGGGTTCG ACTCTCTTGG
TGAATGTTTG GGCCATAGCC CGTGACCCGA AGGAATGGGC CGATCCGTTG GAGTTCAGGC CCGAAAGGTT CCTTCCCGGC
GGTGAGAAGG CTGATGTTGA CGTTAAGGGC AATGACTTTG AGGTTATACC ATTCGGTGCT GGGCGAAGGA TTTGCGCTGG
GCTCAGCCTT GGGCTTCGAA TGGTCCAACT TCTAACTGCA ACCTTGGCCC ATTCTTTTGA TTGGGAACTG GAAAATGGGC
TGAACCCAGA AAAGATGAAC ATGGATGAAG CCTATGGGCT GACCTTACAG CGGGCTGAGC CTCTGTCAGT GGTTCCCAGG
CCCAGGCTCT CACCACATGT TTACTCAATG TATTTATAAT TTTTAAGCTT CTCGCTTTCT TAATAGTGCT TATGTTCCTT
ACTTTTTCTT AACTTGAGTT TTAGTAACAA TAAAAATATA TTGGTGATAT TGTGTAATAT TGTGAAAAGG GAGATGTGTC
TTTTTAGTTG TATTTAATTT CAGGGAAATT TATCTGTATA TGTTTATGAT AATTGAATAT ATGCTATATG GAG

>Vigan.02G261700.01
AAAAAACGGT GAGAGAAAAA AAAAATATTT TGCTATATAT ATACCACCTA GTTTGAGCCA AACTGAAGAA AAACCCCAAC
AGACTACTTC TTCTACTACA GTTTCATTTC AAAATAGTAA CAACTGTTCC AAAACTAACC ATGTCTCCGT TCATGGTTGT
CTTCGCAACA ATCGCAGCAG CGATCCTCCT ATGTCGTTTA ATAAACTTCT TAAAGCGTTC TTCTTCTCTG CCACTCCCTC
CAGGCCCAAA ACCCTGGCCC GTTCTCGGGA ATTTCCCACA CATGGGCCCA GTGCCTCACC ACTCCCTCGC CGCCTTGGCC
CGCGTTCACG GCCCGTTGAT GCACCTGCGT CTCGGATTCG TCGACGTCGT CGTGGCGGCG TCCGCGTCGG TAGCCGAACA
GTTTTTGAAG ATTCATGACT CTAATTTCAG CAGCCGGCCA CCGAACGCCG GAGCCAAATA CATAGCCTAT AACTACCAGG
ACCTGGTGTT CGCCCCCTAT GGCCCGCGGT GGCGGTTGCT CCGGAAACTC ACCTCCGTTC ACCTCTTCTC CGGGAAGGCC
CTGGATGTAT TTAGACACTT GCGTGAGGAA GAGGTGGGAA GACTTACACG TAACCTGGGG AGTTCAGAGG GAAAAGCAGT
GAATTTGGGG CAAGTGTTGA ACGTGTGCAC CACGAACGCA TTGGCGAGGG TGATGATCGG ACGGCGAGTG TTCGACGACG
GGAACGGCGG CTGCGATCCT AGGGCTGACG AGTTCAAGAA CATGGTGGTG GAGGTGATGG TGTTGGCCGG CGTTTTCAAC
ATCGGCGACT TTATTCCGTC GCTCGAGTGG CTTGATCTTC AAGGAGTGCA AGCTAAGATG AAGAAATTGC ATCAAAGATT
TGATGCATTT TTGAGCACCA TTATTGAAGA ACACGATTCT TCTTCCAACA ATCTCTTGAG TATCTTGTTG TCTCTTCAAG
ATGCGAAGGA CGATGACGGA AACCATCTTA CTCACACAGA GATCAAAGCA TTGCTGCTGA ATATGTTTAC GGCTGGAACC
GACACGTCAT CGAGCACAAC AGAATGGGCC ATCGCCGAAC TGATCCGAAA TCCAAGAGTC CTGACCCAAG TCCAGCAAGA
GTTGGACTCT GTTGTGGGCC GAGACAGGAG CGTGAAAGAG GAGGACTTGG CCCATCTCCC GTACTTACAA GCTGTGATTA
AGGAAACCTT CAGGCTCCAC CCATCAACCC CTCTTTCTCT GCCACGTGTC GCTGCCGAGA GCTGCGAGAT ATTTGGGTAC
CACATTCCTA AGGGTTCGAC TCTCTTGGTG AATGTTTGGG CCATAGCCCG TGACCCGAAG GAATGGGCCG ATCCGTTGGA
GTTCAGGCCC GAAAGGTTCC TTCCCGGCGG TGAGAAGGCT GATGTTGACG TTAAGGGCAA TGACTTTGAG GTTATACCAT
TCGGTGCTGG GCGAAGGATT TGCGCTGGGC TCAGCCTTGG GCTTCGAATG GTCCAACTTC TAACTGCAAC CTTGGCCCAT
TCTTTTGATT GGGAACTGGA AAATGGGCTG AACCCAGAAA AGATGAACAT GGATGAAGCC TATGGGCTGA CCTTACAGCG
GGCTGAGCCT CTGTCAGTGG TTCCCAGGCC CAGGCTCTCA CCACATGTTT ACTCAATGTA TTTATAATTT TTAAGCTTCT
CGCTTTCTTA ATAGTGCTTA TGTTCCTTAC TTTTTCTTAA CTTGAGTTTT AGTAACAATA AAAATATATT GGTGATATTG
TGTAATATTG TGAAAAGGGA GATGTGTCTT TTTAGTTGTA TTTAATTTCA GGGAAATTTA TCTGTATATG TTTATGATAA
TTGAATATAT GCTATATGGA G

>Vigan.02G261700.01
ATGTCTCCGT TCATGGTTGT CTTCGCAACA ATCGCAGCAG CGATCCTCCT ATGTCGTTTA ATAAACTTCT TAAAGCGTTC
TTCTTCTCTG CCACTCCCTC CAGGCCCAAA ACCCTGGCCC GTTCTCGGGA ATTTCCCACA CATGGGCCCA GTGCCTCACC
ACTCCCTCGC CGCCTTGGCC CGCGTTCACG GCCCGTTGAT GCACCTGCGT CTCGGATTCG TCGACGTCGT CGTGGCGGCG
TCCGCGTCGG TAGCCGAACA GTTTTTGAAG ATTCATGACT CTAATTTCAG CAGCCGGCCA CCGAACGCCG GAGCCAAATA
CATAGCCTAT AACTACCAGG ACCTGGTGTT CGCCCCCTAT GGCCCGCGGT GGCGGTTGCT CCGGAAACTC ACCTCCGTTC
ACCTCTTCTC CGGGAAGGCC CTGGATGTAT TTAGACACTT GCGTGAGGAA GAGGTGGGAA GACTTACACG TAACCTGGGG
AGTTCAGAGG GAAAAGCAGT GAATTTGGGG CAAGTGTTGA ACGTGTGCAC CACGAACGCA TTGGCGAGGG TGATGATCGG
ACGGCGAGTG TTCGACGACG GGAACGGCGG CTGCGATCCT AGGGCTGACG AGTTCAAGAA CATGGTGGTG GAGGTGATGG
TGTTGGCCGG CGTTTTCAAC ATCGGCGACT TTATTCCGTC GCTCGAGTGG CTTGATCTTC AAGGAGTGCA AGCTAAGATG
AAGAAATTGC ATCAAAGATT TGATGCATTT TTGAGCACCA TTATTGAAGA ACACGATTCT TCTTCCAACA ATCTCTTGAG
TATCTTGTTG TCTCTTCAAG ATGCGAAGGA CGATGACGGA AACCATCTTA CTCACACAGA GATCAAAGCA TTGCTGCTGA
ATATGTTTAC GGCTGGAACC GACACGTCAT CGAGCACAAC AGAATGGGCC ATCGCCGAAC TGATCCGAAA TCCAAGAGTC
CTGACCCAAG TCCAGCAAGA GTTGGACTCT GTTGTGGGCC GAGACAGGAG CGTGAAAGAG GAGGACTTGG CCCATCTCCC
GTACTTACAA GCTGTGATTA AGGAAACCTT CAGGCTCCAC CCATCAACCC CTCTTTCTCT GCCACGTGTC GCTGCCGAGA
GCTGCGAGAT ATTTGGGTAC CACATTCCTA AGGGTTCGAC TCTCTTGGTG AATGTTTGGG CCATAGCCCG TGACCCGAAG
GAATGGGCCG ATCCGTTGGA GTTCAGGCCC GAAAGGTTCC TTCCCGGCGG TGAGAAGGCT GATGTTGACG TTAAGGGCAA
TGACTTTGAG GTTATACCAT TCGGTGCTGG GCGAAGGATT TGCGCTGGGC TCAGCCTTGG GCTTCGAATG GTCCAACTTC
TAACTGCAAC CTTGGCCCAT TCTTTTGATT GGGAACTGGA AAATGGGCTG AACCCAGAAA AGATGAACAT GGATGAAGCC
TATGGGCTGA CCTTACAGCG GGCTGAGCCT CTGTCAGTGG TTCCCAGGCC CAGGCTCTCA CCACATGTTT ACTCAATGTA
TTTATAA

>Vigan.02G261700.01
MSPFMVVFAT IAAAILLCRL INFLKRSSSL PLPPGPKPWP VLGNFPHMGP VPHHSLAALA RVHGPLMHLR LGFVDVVVAA
SASVAEQFLK IHDSNFSSRP PNAGAKYIAY NYQDLVFAPY GPRWRLLRKL TSVHLFSGKA LDVFRHLREE EVGRLTRNLG
SSEGKAVNLG QVLNVCTTNA LARVMIGRRV FDDGNGGCDP RADEFKNMVV EVMVLAGVFN IGDFIPSLEW LDLQGVQAKM
KKLHQRFDAF LSTIIEEHDS SSNNLLSILL SLQDAKDDDG NHLTHTEIKA LLLNMFTAGT DTSSSTTEWA IAELIRNPRV
LTQVQQELDS VVGRDRSVKE EDLAHLPYLQ AVIKETFRLH PSTPLSLPRV AAESCEIFGY HIPKGSTLLV NVWAIARDPK
EWADPLEFRP ERFLPGGEKA DVDVKGNDFE VIPFGAGRRI CAGLSLGLRM VQLLTATLAH SFDWELENGL NPEKMNMDEA
YGLTLQRAEP LSVVPRPRLS PHVYSMYL*