GBrowse Details

Vigan.02G245600.01

Basic Information:
Name: Vigan.02G245600.01
Multiple alignment
Variant Information
Position: Chr02:34467236..34471831 (+ strand)
Length: 4596
Functional Information:
Description: Similar to rac-like GTP-binding protein ARAC10-like. [XP_004501950.1, Cicer arietinum]
GO: Biological Process: GTP catabolic process (GO:0006184)
Biological Process: signal transduction (GO:0007165)
Biological Process: small GTPase mediated signal transduction (GO:0007264)
Biological Process: protein transport (GO:0015031)
Cellular Component: intracellular (GO:0005622)
Cellular Component: membrane (GO:0016020)
Molecular Function: GTPase activity (GO:0003924)
Molecular Function: GTP binding (GO:0005525)
InterPro: Small GTPase superfamily (IPR001806)
Small GTPase superfamily, Rho type (IPR003578)
Small GTPase superfamily, Rab type (IPR003579)
Small GTP-binding protein domain (IPR005225)
Small GTPase superfamily, Ras type (IPR020849)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1.22,0.82,5.73,7.91,4.74,6.07,4.16,7.13
Arabidopsis thaliana homolog: AT5G62880.1
Structure :
Position: Chr02:34467236..34467511 (+ strand)
Length: 276
Type: five_prime_UTR
Position: Chr02:34467512..34467616 (+ strand)
Length: 105
Type: CDS
Position: Chr02:34467886..34467973 (+ strand)
Length: 88
Type: CDS
Position: Chr02:34468323..34468432 (+ strand)
Length: 110
Type: CDS
Position: Chr02:34468520..34468583 (+ strand)
Length: 64
Type: CDS
Position: Chr02:34469637..34469701 (+ strand)
Length: 65
Type: CDS
Position: Chr02:34469796..34469861 (+ strand)
Length: 66
Type: CDS
Position: Chr02:34470729..34470887 (+ strand)
Length: 159
Type: CDS
Position: Chr02:34470888..34471831 (+ strand)
Length: 944
Type: three_prime_UTR

>Vigan.02G245600.01 class=Sequence position=Chr02:34467236..34471831 (+ strand)
CAAAAAATTG TACCTGACTT TAAATAAAAG CACAAAAGAA AAAATAATAA AAAATTGCTT TTGCAAAGAC TAAGATTAAA
AAAGAAAAGC AATTGGCAGG TACAAGAAAG AGGGAATGAG TGAGAATCAT GTGAAGTGCC GCCACTCTTT CTCTCTCTCC
ATCAGTGGCT GGGTCAATCA AAAGCTTTAA TCTTTTACAA TCCAACAAAA CACCCACTTC TGTTTCCCTT TTGGTTAAGC
TATTCTCAGA GTTTCTTCTT CTTTGTGTTT CTTCCAATGG CTGCTATTGC CCCAAGATTC ATCAAGTGTG TGACCGTTGG
GGACGGAGCT GTAGGGAAGA CCTGCATGCT CATTTGCTAC ACCAGCAACA AATTCCCCAC GGTGTGCATG CTTTCTTCCA
AATCCTTTAT GCTTTGAAGA GATCATTTTT TTAATTGCTT CCATTTAATG TTCTTATCCT GTAATTGTTC ACTGTGTGTG
CATATGCATC CTGAATTCCG CTCAGTTCCG TTGAAGTCAT CTTAATTTGC TTAAAACATG ATTTTTTTGT TTGTGTGTGT
GTTGGACACA GAAGGTAACC CATTTATTAT CTTGTAAAAT TTCACCATTG AGTTCATCTG ATTTGGCTTT CCCTCTATGT
TGATCATCAG GACTATATTC CCACTGTGTT TGACAATTTC AGTGCCAATG TAGTTGTTGA AGGCGTAACT GTCAATTTAG
GCCTTTGGGA TACAGCTGGT ATACCCTCTG AGACTTGTTA TAATTTTTTT GTTGTTTTAT TTTATCTGGG GAGGGGAAGG
ATTCGTGTAA AACTGAAAAG ATTGAATTAA AGTTTCTTGA GATTTCACAC AATACTCCTT TTTTTTCTTC ATTTAGAGTA
TATTAAACTG ACACCTGCTG TCCTAAAACA CTTTATTTAC ACCAAATACT CCCAACAGGA GAGTTTCTGG AACCTTAAAA
AGGTAGTGAT TCAGAAGCAA TTTCAATAAA CCACTGGTGG TATAAGTCTA ATTGGCTCCA AGGGAGGGTT TTGTATGTTG
AAAGGCAAAG TTTGTTATAT TGTATTTGTT TCCAATACCT TCCTTAGGGC AAGAGGATTA CAACAGGCTG AGGCCATTGA
GCTACAGGGG GGCAGATGTC TTTGTCTTGG CTTTTTCTTT AGTTAGTCGA GCAAGCTATG AGAATGTGCT GAAGAAGGTA
TGCTTCAGTG CTTGTATCTC TGAATTGGTA TTTTGATGTC TTGCAGATTT CTCTTTTGTT CTCTAATTTG TATGCACTCT
CCAGTGGATC CCTGAACTCC AGCATTTTGC CCCTGGCATC CCATTGGTAT TGGTTGGTAC CAAATTGGGT AAGTCATCCT
TCACTTGTGT TAATGTCTGT CTTAGTCTCG TGCTAATTTG TCTTCTAATT ATAGACCCTT CTGTGTATCA ATTCTTTTAC
AATAGAATTC AGTAAAAGAA TATGCACAAA GTTTTGTGCC ATAGTATATA TTTTAAACGT AACAAACTCA TTCATCATAA
ATTTGTGAAG ACTGGCTTTC ATATGGGTTG GGCTTATATG TGCAGCTCCT AACTTGTCCA TGTATCCCTA CTATAGTGAG
GACACATTTT AGTTTACATC TCCTTCATCA CTTATTGGTA ATCTACTTAA GAAATTGTAT TCAGATATTA CAAATGCAGA
TTGCTTGACC AAAAAATTCT ACTGCAAGGA TGACATAATT GTATCATTGA TGCCATCTAC TTTAATTGGA GTAAACAAGA
ACTCAGTGCT ATAAGCTTTA AAGACTATTC TTTAGTGTAG TTTAAATGTT GTAATCCCTT TTATTAATTG ATCAATAAAT
ATTGGATCAT CTTCACAAAA GGATGCCTAA TCTTTTTTAC CAAAATTTAG AATTTAAAAA TAAAGAAGTT GGATCATGAT
ACGTAAGCAT CATGACAATT GCTTCATGAT GCATAATCTT CACATCAACT CTAATATTAC TACCACTGAA TTAAATGAAA
GAAAGCTTTA TTCAAGATTT GAAAAACTAT GACAATAACG AGCAACATAA TCACGAATTC ATTAGTCTAC CATTAATCTT
GATCTCCTTT ACTTTTTCTT GATTCATTTG ACAGTTTGCA TAATTTAGTA TTTTGATCAA ATAGTTTTTG TCTCTTGCTT
CATACAGCAG ACATAATCCA TCTCTAGTTC TAACAGTTTG TTAATTTTTA CTTCATCATA TCCTAAAACA TTACTTATGC
ATAAGTTTTA TTTCAAGATA ATATTTTATT TCAACAGCAA GTTAGTGTTA GAACAAGATT GTAAAAGTAA AAGGAAAAAG
GAAAACAATT TTGACATCAA TGTTCAATTA ATGGTGGCAG TAGTATGACA TGCATTGCTA TTATGTGTGA TGGGCATGCA
GATCTCCGAG AAGACAAGCA CTATATGGCT GATCATCCAG GTTTGATGCC CGTGACTACT GAGCAAGTAC AAATCTTTCA
TCACCAAATG TGTATGCAAA TGTGTAGAGT TTCGCATGCA ATGATTTTTA TGAAGTATTG GATTTTCTGT TCATTACTAG
GGTGAGGAAC TCCGTAAACA GATTGGAGCA ACCTATTATA TCGAGTGCAG CTCAAAAACT CAGCAGGTAT ATTTAAGTAC
CATCTTATTC TTGCAATTGT TTGTTTGTAC ATGAAAAAAA TACCACACAG TATAATTCAT CTTTTAGAGG AATGCAATTT
AAAATAAAAT AAATTATGGT AGGTGGATCA TGTTTGGATG ATGTGCAATA ATGTAAATCA CTCATGCCTT ACTGATATAG
CCTTTTTAAC AACTTTTTTC TAAATTTTAA GTAAAATCTA ATTCATGAAG TTGGGCCATG TTTTTATTAT TTTGTTGTTT
CACATATCAA ATAATTATGA CTTCAAAATG ATTAAATGTA ATGTAAAATA AGGATGTGGG ACTTGTGGAC CCAGTTAATA
AAGTTTAGAG TTGTTAGGCT GGAGAAGTGA GTTACCTAAC GGACCCGATT TATCTGTAGC ACTTTCCCTG CTTTCCAGAT
CCTGGAATGT ATTTTGTATG ATCTGAAATG CATGGAAAGT GGTTCAAGAA AACTGTGAAG TGCAAGAAGA AAAATGTTTA
CATTATAAAA GGTAAAATTG TCTAATATCT AATCATGGAA TCCACTTAAT TAATTTAAGA ACCTCAAAAG GTAAAATTCA
GTTGTTGGGA TGGAGATGGC CTGGCATAGA ATGTGAAAAT TTGTTAAATT ATCCGAAAGG TGCCAATACA CCATTACTCC
AATGAGATGC TTTCATAGCT GTAAAAAATT GTGAAATGTA GCAATATCAT TTGGTTTTGC TCATGTGATG TGTTTGTTGT
TAAAGGGTCT ATTATTGGTA TCTCTCAATT TTGGTATGCC AGATATTTTT CATCAGTTTT TGGAGATACT TACTTTGATG
TTTTAACAAA TATTCTGCCT GAAACCAAAC TTATTTTCGC AATACTATTG CAGAATGTGA AGGGGGTTTT TGATGCTGCA
ATAAGAATGG TGATCAAGCC TCCACAAAAG CAAAACGAGA AGAGGAAGAA AAAACCACGA GGCTGTTTCC TGTCAGTGCA
CCTTTTCTAT ATTATATCTA ACAGTTTTAT ACATATTTTT CTGTTGGGGT AACACTTTTC CTTTGACACC TCACTGTTTT
CATTTCAACA ATTTTATATT ATCCCTATCG AAAAGTTACC CACTTTGAGT ATTCAAATAT TTTAGTAGTT GGTTGTACTT
ACCCAAAATT TATTGTGCAT CAAGAACTGA TAAAATAGTT AATAACTGGT CAGGTTAGGT TACCAATACT TAAGGAAAAC
AATAATGAAT AACGTGGCAA CTCGCATTAA ACCACCATAG TTTATTAAAG AGAATACACG GTGGCAATTA AAGTGTGAAA
AAAATATATG TATATATGCA CATGATAAAA TTGTACTATA GTTTGGCTTG TTTTGAATGT TATAATATTA GTTCCTGTGA
CTTTTGGTTA TTGGATTTAA TCTATCTCAG TGAAAATGCA GAAACGTGTT GTGTGGAAGG AACATTGTTC GTCTTAAATG
AAAGACTACA TTAGCATTTC ATCCAAAGGT TTGATTGTAG AAATATGAAA CTTGAATTAT AATGACTTGG GTGGAGTTTG
CAGTGTTGGT ACTTATATTT GGTTGTTTTG AATTTGATTT CAGGTAGGTT TTAATGTTAT GAAACAGTTG CACCATATAA
GCATGTAAAG AAAGCACAAA GAAGTTTGTT GGCTAGCTAC CATTTATTTA AATTATTTTA TTTGAATTTG ATCTAGTTTC
AGTGTATATA TATATATATG ATATGAGGTG TCATTATCTG ATATTCAAAC TAAACTAGCT TTTCAAATTA TTACTAATTA
AAGCGTGCTG AATTGTTGTA TTGTTCATAA TCTCTATATA AAAGGACTCG TTGGGTGGTT CATTATTCAG AATAGACCAA
TATCAGCAAC TATTTGAAAA ACCTATGCTT TTATTGTACT TATTTCTCAA ATGATATGAC GTTTGATCCC ACCATCCCTC
TCCCTTCACC TTCTCCAACT TTAGCTGCTC AATTGT

>Vigan.02G245600.01
CAAAAAATTG TACCTGACTT TAAATAAAAG CACAAAAGAA AAAATAATAA AAAATTGCTT TTGCAAAGAC TAAGATTAAA
AAAGAAAAGC AATTGGCAGG TACAAGAAAG AGGGAATGAG TGAGAATCAT GTGAAGTGCC GCCACTCTTT CTCTCTCTCC
ATCAGTGGCT GGGTCAATCA AAAGCTTTAA TCTTTTACAA TCCAACAAAA CACCCACTTC TGTTTCCCTT TTGGTTAAGC
TATTCTCAGA GTTTCTTCTT CTTTGTGTTT CTTCCAATGG CTGCTATTGC CCCAAGATTC ATCAAGTGTG TGACCGTTGG
GGACGGAGCT GTAGGGAAGA CCTGCATGCT CATTTGCTAC ACCAGCAACA AATTCCCCAC GGACTATATT CCCACTGTGT
TTGACAATTT CAGTGCCAAT GTAGTTGTTG AAGGCGTAAC TGTCAATTTA GGCCTTTGGG ATACAGCTGG GCAAGAGGAT
TACAACAGGC TGAGGCCATT GAGCTACAGG GGGGCAGATG TCTTTGTCTT GGCTTTTTCT TTAGTTAGTC GAGCAAGCTA
TGAGAATGTG CTGAAGAAGT GGATCCCTGA ACTCCAGCAT TTTGCCCCTG GCATCCCATT GGTATTGGTT GGTACCAAAT
TGGATCTCCG AGAAGACAAG CACTATATGG CTGATCATCC AGGTTTGATG CCCGTGACTA CTGAGCAAGG TGAGGAACTC
CGTAAACAGA TTGGAGCAAC CTATTATATC GAGTGCAGCT CAAAAACTCA GCAGAATGTG AAGGGGGTTT TTGATGCTGC
AATAAGAATG GTGATCAAGC CTCCACAAAA GCAAAACGAG AAGAGGAAGA AAAAACCACG AGGCTGTTTC CTGTCAGTGC
ACCTTTTCTA TATTATATCT AACAGTTTTA TACATATTTT TCTGTTGGGG TAACACTTTT CCTTTGACAC CTCACTGTTT
TCATTTCAAC AATTTTATAT TATCCCTATC GAAAAGTTAC CCACTTTGAG TATTCAAATA TTTTAGTAGT TGGTTGTACT
TACCCAAAAT TTATTGTGCA TCAAGAACTG ATAAAATAGT TAATAACTGG TCAGGTTAGG TTACCAATAC TTAAGGAAAA
CAATAATGAA TAACGTGGCA ACTCGCATTA AACCACCATA GTTTATTAAA GAGAATACAC GGTGGCAATT AAAGTGTGAA
AAAAATATAT GTATATATGC ACATGATAAA ATTGTACTAT AGTTTGGCTT GTTTTGAATG TTATAATATT AGTTCCTGTG
ACTTTTGGTT ATTGGATTTA ATCTATCTCA GTGAAAATGC AGAAACGTGT TGTGTGGAAG GAACATTGTT CGTCTTAAAT
GAAAGACTAC ATTAGCATTT CATCCAAAGG TTTGATTGTA GAAATATGAA ACTTGAATTA TAATGACTTG GGTGGAGTTT
GCAGTGTTGG TACTTATATT TGGTTGTTTT GAATTTGATT TCAGGTAGGT TTTAATGTTA TGAAACAGTT GCACCATATA
AGCATGTAAA GAAAGCACAA AGAAGTTTGT TGGCTAGCTA CCATTTATTT AAATTATTTT ATTTGAATTT GATCTAGTTT
CAGTGTATAT ATATATATAT GATATGAGGT GTCATTATCT GATATTCAAA CTAAACTAGC TTTTCAAATT ATTACTAATT
AAAGCGTGCT GAATTGTTGT ATTGTTCATA ATCTCTATAT AAAAGGACTC GTTGGGTGGT TCATTATTCA GAATAGACCA
ATATCAGCAA CTATTTGAAA AACCTATGCT TTTATTGTAC TTATTTCTCA AATGATATGA CGTTTGATCC CACCATCCCT
CTCCCTTCAC CTTCTCCAAC TTTAGCTGCT CAATTGT

>Vigan.02G245600.01
ATGGCTGCTA TTGCCCCAAG ATTCATCAAG TGTGTGACCG TTGGGGACGG AGCTGTAGGG AAGACCTGCA TGCTCATTTG
CTACACCAGC AACAAATTCC CCACGGACTA TATTCCCACT GTGTTTGACA ATTTCAGTGC CAATGTAGTT GTTGAAGGCG
TAACTGTCAA TTTAGGCCTT TGGGATACAG CTGGGCAAGA GGATTACAAC AGGCTGAGGC CATTGAGCTA CAGGGGGGCA
GATGTCTTTG TCTTGGCTTT TTCTTTAGTT AGTCGAGCAA GCTATGAGAA TGTGCTGAAG AAGTGGATCC CTGAACTCCA
GCATTTTGCC CCTGGCATCC CATTGGTATT GGTTGGTACC AAATTGGATC TCCGAGAAGA CAAGCACTAT ATGGCTGATC
ATCCAGGTTT GATGCCCGTG ACTACTGAGC AAGGTGAGGA ACTCCGTAAA CAGATTGGAG CAACCTATTA TATCGAGTGC
AGCTCAAAAA CTCAGCAGAA TGTGAAGGGG GTTTTTGATG CTGCAATAAG AATGGTGATC AAGCCTCCAC AAAAGCAAAA
CGAGAAGAGG AAGAAAAAAC CACGAGGCTG TTTCCTGTCA GTGCACCTTT TCTATATTAT ATCTAACAGT TTTATACATA
TTTTTCTGTT GGGGTAA

>Vigan.02G245600.01
MAAIAPRFIK CVTVGDGAVG KTCMLICYTS NKFPTDYIPT VFDNFSANVV VEGVTVNLGL WDTAGQEDYN RLRPLSYRGA
DVFVLAFSLV SRASYENVLK KWIPELQHFA PGIPLVLVGT KLDLREDKHY MADHPGLMPV TTEQGEELRK QIGATYYIEC
SSKTQQNVKG VFDAAIRMVI KPPQKQNEKR KKKPRGCFLS VHLFYIISNS FIHIFLLG*