GBrowse Details

Vigan.02G238800.01

Basic Information:
Name: Vigan.02G238800.01
Multiple alignment
Variant Information
Position: Chr02:33212315..33217208 (+ strand)
Length: 4894
Functional Information:
Description: Similar to uncharacterized LOC101208061. [XP_004155083.1, Cucumis sativus]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.47,5.07,9.67,13.40,11.25,7.02,8.14,6.95
Arabidopsis thaliana homolog: AT5G63040.1
Automatic updates:
Name: NM_001254239 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100803499 (LOC100803499), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:33212315..33212521 (+ strand)
Length: 207
Type: five_prime_UTR
Position: Chr02:33212522..33212608 (+ strand)
Length: 87
Type: CDS
Position: Chr02:33214166..33214232 (+ strand)
Length: 67
Type: CDS
Position: Chr02:33214936..33215328 (+ strand)
Length: 393
Type: CDS
Position: Chr02:33215973..33216316 (+ strand)
Length: 344
Type: CDS
Position: Chr02:33216581..33216796 (+ strand)
Length: 216
Type: CDS
Position: Chr02:33216797..33217208 (+ strand)
Length: 412
Type: three_prime_UTR

>Vigan.02G238800.01 class=Sequence position=Chr02:33212315..33217208 (+ strand)
ATAAGCCAAA GGGTTCGGTT CAATCTTACA CCTAGAAATC TACGGCTGAG GGAAGTGGCG CTCGTTGTAT GACTCATACT
CTGTTTTGCG TTCCACTTTG TGTTCTTAGC ATTTCTCGAA TCTTTATTTA TTCAAGTTAA GATGGTTGGG TGATCCAACG
CGACCCTCTT TGACCCTTTT CGTTGCTTCC TTCATTCGCA TGTTATCATG GCAAATGCCA AGTTCGGTTC TTCCTTTTCT
TGTTCCGCGG CTTCTCTTTC TTCTTCTCCT TTACAACGCA CGAGAAGTGC TCAGGTACTT ATGCCAATCA ATTTTTGGAA
TTCTTTATCA ATTTATTCCG TTCCCCAATT TCACTATGAT TTTTCTTTTC AATTTTAGTT TTCCCTGGTT TTAATAGTTG
ATGTTTAGTA CTTGTCAACA TGGGTTGACC TAGAGTGACC AATTGTTATG TGTTTTATCA GTGGTGTTAG GCTTGTGGTT
TGAATTTTCT GGAACTGGGA TGATAGAACT TCTTCTGTTA AACCTTAAGG ATTGAAAATT GATTTGGTTT CATTTTTTTT
TGGAGTTTGG GAGAATGTAT CTCCTACTAT TGAACTTAGC TAAGGTAGGG TTTGCTGCTG AATTTTTCTT CATCGGTAGG
GTTTGACTGG AAATAGTCAT TAGTGGAAAT GCAGGCACTT GATTCCTTCA CCTGTGTTAT TTGGAAAAGG CAGCTTAATG
AAGAAGACGT GTGAAGAAAA TCCTTGGCAT TCTGTTCACA CTTTGGCACT GTGAAGATTG ATGTTAATTC TTCATTTAGT
GATTTTTTTT TAACAATGAC GCCAGCTTTA TATTTCATAG GCGTTTGGAA TTGAAAAAGA AGAGGATGAT TAAGGAGACC
CTTGAATATA CATTTAGTTG GATCTTTCCT CAAATAAGAT AAACCGACAC CTGAACTTGG TTACCCACTG AAAATTTTGA
ATAACCAGCT GGCAGGTGAA ATATAATTAC CAGTGGCTTG CTCTGCTAGA ACATATGTGA GGCATAGACA TTAGTTTTAA
GGTGGTTGTA TGAGGTAGAA CTAAATGGTA TTGGTTTGAT GACAACTGAA AGTTCAGTAG TTAGTGAAGT CATTGCTAAC
TTAGCAATTG GTTTGGTGAG TTTCCTAGCT GAAATTGGCT TGTAAAACTG CTGATTTTTT GTCTTTTCTC TTTCTCTGTC
TTCCTTGCTC ATTCTGTCAA GTTTCTTAAG GTGGTTACTG GTTTAAGTTT AGGGTTAGAT ACAAGTTGTG CAATAAGTTG
CTACAATGTG TCAAATAGGT GTTTGCAAAT TTTAATTACT GGAAACATGA TCAAATGGAT GTGTACATTC TAATAGTTTT
TTGTGCATTA ATTTGAGCAA TGAATAATGT TTAATATGAA TGTTGAGTGA AGAAAATATA ATTAAGAATT CATTTTATAG
TCACTTACTC AAATCCATAG ATGTCTTGGG ACCTATATTG CAAACTCTGT TCTGTTTGGG ATTCACGAGT CTTGTTCCAT
GTAAATTTAG CGTACCTTAT GGTTTATGCA TTTAATTATT ATTAGTCAAT TAATTTTCTC ATATAAATAA TTCATGCTAT
AGATTAATGA CTATATAGAT AGTTTTTCAT GGAATTAATG ATGACAAGGT CATGAGACGT GACTTTACAA TTTCCATTTT
CTGCATAATA TTTAAACTAT CAATTGACCA ATTTTTTTAT ATGCTATTTG AGTAATTCTC TCTTTTGGAT TAAATCTATT
TCATTATAAT GCTAATTCGA AATTGATAAC TGCTTTATCT TGAGTATTGC TTTATTTATT CTTACCTAGT TTCTTTTCAT
TTAATATTTA GTTGAGCTTA TCACAAGGGT TGTTTGTCAA CCAGCTAACT GGTGCTCAGC TGCAAATGTA CACTAAAGGT
ACCTTTTTTA TTTATTGGTT GATTCCTGAA TTTCTACATT CTGCATTAGG TATCCAACTC AATTGCCTTT CCATCCTTTA
AAAATCCCAA GCATATTTCT TGAATACATT TGTTGTAGAA ATGTGTAATT GTAGTATATA TTGCAGCCAA TCCTTGAACT
GAGGCTCATG TGTGGATTAG ACCTTAGGGT TCTATAAAGG TGCAAATATT CACTGAACCT CTCACCATGG AAAACCCTCT
ATTAAGACAA CCATTAATTA TGATATATCT TGAATTTGAA AGTTGTTTAA CTCACTCTGG AAACTAGCTC ATGAGGCAAG
CATTGTCCAA CTAACCTCTA CTTCTGCCAT ATCTATATTC TGTAGTCAAA GTAAGATCTC AATACTACAT TTTAAGATTG
AAAAATGGAA AGGATAATGC ATTTTAGATT AGGACCGTAT TGCAGTTTTT CTAACATAGT TTTTTGTTAT TGTCATGTAA
TAGTTTCATT AGATGGATAA CAGTTTGTTT AATGGAGGCT GCTTTTGTTT GAACTGTGAT GTTCCACGGT GTCACTTGTG
CAATTCTAAC CTTTAGTTCT AATCTGCAAA TGGACCAAAG TTGAAGGATG TGAGCTGCAA TTTATAATTT ATTTTGTATG
AACTCCTTTA AATATATATC TGTTAACATT CTTTTTTGGT TTGCATTTGT ATCATGGCTA GACAAATCAT GCCAGCTTAA
GTTTATGCAC GGAATGCTGA ACTTTAAGGG AAGGTTACAG AAACAGCATA ATGCTCTTTT TGTTGTCTCT GAAGATCGTG
AGCTTGAAAC AACTACTTTA GTGCCAGAAA ACAATGATAT TGTTGTAGAA GGCATCTCTC CTGCAAGCAA CTTGTATTTT
CATTTATCAG GGAGTGATGG AAAGTCAGGT TTAATATCAT TTTATAACCG GCCTTACAGA AGAAATAGTA AGATACTTTT
ATCAAATTCA GAGAGAAGTC AAAACAGCAT ATTGTGGTTT CTGGGCCCTG CAGTCCTTGT TGCTTCCTTC ATTTTTCCCT
CACTCTATTT ACGCAAAGTG CTTTCCATCA TTTTTGAGGA CTCTTTGTTA ACAGGTAACT AATGCTTTTA AGAAAGACCC
TGTTGTGCTA TATTGGTTTG TCTGCAGTAA TTTGCATAGC TTACTATTTT TATGTAGAGC GTTTTCTATA ATTTGATTGT
AATTCACAGT AAGCTAGTAA AATCTCTCTC CTTGAGTCAA TCAATATGGA TAGCTATCTG CTAATGAAAA CTGTAGAGAA
AGTAGTAATT ACATGTATTT TGGTTCGTTG ACGCTAGGGA AAACATTATG GATGTTCATA AACTGGATGT GATGCTCATT
GCTTGACTTG GAATTATTTG TTTCTCAATA AAATAAATGA CATCATTCAT TGGATGATTG GACCGAAGTG GAGAGTAAAC
TATCAAACAC AAGGATGAAA TAATTTTGCA TCTTTGATAT CAATGATAAA CAAATCATTC CTAAACTTAG AATTGGTTTA
GAAATTCAAA ATGTTTGTGA CTGCGAAAAG TAGAATTACT GTTTGTAATT CTTGTGTATT ATGTGCTGCA ACCATGGTAG
ATGATCTCAA ACTTTCCAAC GTTAAATTGC TTGATTTAAT TCTTCTTTTC TATTTCTTTT TTATTTTCTT GTTTGCTGTG
AATGGTTATT TTTTCTTTGA GTTTTAAACT CTGAAGTGTC TTCTTTCTTC ATCTCCAGAT TTCCTCATCT TATTCTTCAC
AGAGGCAATT TTCTACTGTG GTGTTGCGGT ATTCCTTTTC CTACTGGACC ATTTAAGAAG ACCCATGGTA CTGGATACTG
CTACAATCAA TAGTGATACA CCACCCCCAC AGTTGGGACA AAGAGTCTCT TCTGTTGCTA CTCTTGTGCT TAGTCTAGTA
ATTCCAATGG TAACTATGGG TTTTGTCTGG CCATGGACTG GCCCTGCAGC CTCTGCAACT CTCGCTCCAT ACCTTGTTGG
TATAGTTGTC CAATTTGCAT TTGAGCAGTA TGCCAGATAT AGAAAGTCAC CGTCACGGTC TGCCATTCCA TTAATCTTTC
AAGTAAGGAC AATCCATTTC CTTGTTGATT TACTTTCTAA ATTTTGTGAT GCTAGATTGT GTCAAGTACA TTTATTTGCT
TTTGCCTGAT TGATGCTTCG ATAGTGTAAT TTTACATTTT GATTTTCTGG ATCCTATAAA TGATTAGATT TTGATTAGCT
TTGCTCTCCT TAGTGGATTG AATCAACTTA AAAATTTCTT ATATTCTTAT AACCAACTTT CTCAATTAAT TTGTTATTCA
TAATAGTAAT GAAGTGTAAT TAACAGGTGT ACAGGCTTCA CCAACTAAAT AGAGCAGCAC AACTGGTGAC AGCTTTATCA
TTTACAGTCA GAGGAGCTGA AATGACCTCA CACAACATGG CTATAAACAG CTCTTTGGGT ACCCTTCTAA ATGTCCTACA
ATTCCTTGGT GTGATTTGCA TTTGGTCCCT GTCTAGCTTC CTCATGAGAT TTATCCCTTA TGCTTCAACA ACTATGCAGT
AAAGAATCTC TTGTAAAGTT TCTTAAATGT CATCTCATGC ATCAAAACAC GCCCCAGTTC ATCTTCGTGC AGAATATGTC
GATGCAGTTG GGTTTATTTT TTGGTGGTGT AAAACTGTTC AGTCTAATTG AAAATTTGGA CACTGATCCT CTGACTCGTC
TAGAATAAAA AATGGTTACA GGAATTTGTA ATTGAGGATT TTGATACAGA TGAAGCAGAG GAATTGTCAT AGCTCTACTT
GCAGTAAATT TTGGAACGAA GTATTTCTAG TAGAAAAATG TTAACTGCAC AAAGTGAAGA AAAAATTGGT AATTGCAGTA
AATTATACAG AGAAGGGTGC ATTTGACCTG GTATAGATAA TTTGGTAAAT CTATTAATGT ATAAAATACC ATTTATTTTG
GTATGTGTTG AGTA

>Vigan.02G238800.01
ATAAGCCAAA GGGTTCGGTT CAATCTTACA CCTAGAAATC TACGGCTGAG GGAAGTGGCG CTCGTTGTAT GACTCATACT
CTGTTTTGCG TTCCACTTTG TGTTCTTAGC ATTTCTCGAA TCTTTATTTA TTCAAGTTAA GATGGTTGGG TGATCCAACG
CGACCCTCTT TGACCCTTTT CGTTGCTTCC TTCATTCGCA TGTTATCATG GCAAATGCCA AGTTCGGTTC TTCCTTTTCT
TGTTCCGCGG CTTCTCTTTC TTCTTCTCCT TTACAACGCA CGAGAAGTGC TCAGTTGAGC TTATCACAAG GGTTGTTTGT
CAACCAGCTA ACTGGTGCTC AGCTGCAAAT GTACACTAAA GACAAATCAT GCCAGCTTAA GTTTATGCAC GGAATGCTGA
ACTTTAAGGG AAGGTTACAG AAACAGCATA ATGCTCTTTT TGTTGTCTCT GAAGATCGTG AGCTTGAAAC AACTACTTTA
GTGCCAGAAA ACAATGATAT TGTTGTAGAA GGCATCTCTC CTGCAAGCAA CTTGTATTTT CATTTATCAG GGAGTGATGG
AAAGTCAGGT TTAATATCAT TTTATAACCG GCCTTACAGA AGAAATAGTA AGATACTTTT ATCAAATTCA GAGAGAAGTC
AAAACAGCAT ATTGTGGTTT CTGGGCCCTG CAGTCCTTGT TGCTTCCTTC ATTTTTCCCT CACTCTATTT ACGCAAAGTG
CTTTCCATCA TTTTTGAGGA CTCTTTGTTA ACAGATTTCC TCATCTTATT CTTCACAGAG GCAATTTTCT ACTGTGGTGT
TGCGGTATTC CTTTTCCTAC TGGACCATTT AAGAAGACCC ATGGTACTGG ATACTGCTAC AATCAATAGT GATACACCAC
CCCCACAGTT GGGACAAAGA GTCTCTTCTG TTGCTACTCT TGTGCTTAGT CTAGTAATTC CAATGGTAAC TATGGGTTTT
GTCTGGCCAT GGACTGGCCC TGCAGCCTCT GCAACTCTCG CTCCATACCT TGTTGGTATA GTTGTCCAAT TTGCATTTGA
GCAGTATGCC AGATATAGAA AGTCACCGTC ACGGTCTGCC ATTCCATTAA TCTTTCAAGT GTACAGGCTT CACCAACTAA
ATAGAGCAGC ACAACTGGTG ACAGCTTTAT CATTTACAGT CAGAGGAGCT GAAATGACCT CACACAACAT GGCTATAAAC
AGCTCTTTGG GTACCCTTCT AAATGTCCTA CAATTCCTTG GTGTGATTTG CATTTGGTCC CTGTCTAGCT TCCTCATGAG
ATTTATCCCT TATGCTTCAA CAACTATGCA GTAAAGAATC TCTTGTAAAG TTTCTTAAAT GTCATCTCAT GCATCAAAAC
ACGCCCCAGT TCATCTTCGT GCAGAATATG TCGATGCAGT TGGGTTTATT TTTTGGTGGT GTAAAACTGT TCAGTCTAAT
TGAAAATTTG GACACTGATC CTCTGACTCG TCTAGAATAA AAAATGGTTA CAGGAATTTG TAATTGAGGA TTTTGATACA
GATGAAGCAG AGGAATTGTC ATAGCTCTAC TTGCAGTAAA TTTTGGAACG AAGTATTTCT AGTAGAAAAA TGTTAACTGC
ACAAAGTGAA GAAAAAATTG GTAATTGCAG TAAATTATAC AGAGAAGGGT GCATTTGACC TGGTATAGAT AATTTGGTAA
ATCTATTAAT GTATAAAATA CCATTTATTT TGGTATGTGT TGAGTA

>Vigan.02G238800.01
ATGGCAAATG CCAAGTTCGG TTCTTCCTTT TCTTGTTCCG CGGCTTCTCT TTCTTCTTCT CCTTTACAAC GCACGAGAAG
TGCTCAGTTG AGCTTATCAC AAGGGTTGTT TGTCAACCAG CTAACTGGTG CTCAGCTGCA AATGTACACT AAAGACAAAT
CATGCCAGCT TAAGTTTATG CACGGAATGC TGAACTTTAA GGGAAGGTTA CAGAAACAGC ATAATGCTCT TTTTGTTGTC
TCTGAAGATC GTGAGCTTGA AACAACTACT TTAGTGCCAG AAAACAATGA TATTGTTGTA GAAGGCATCT CTCCTGCAAG
CAACTTGTAT TTTCATTTAT CAGGGAGTGA TGGAAAGTCA GGTTTAATAT CATTTTATAA CCGGCCTTAC AGAAGAAATA
GTAAGATACT TTTATCAAAT TCAGAGAGAA GTCAAAACAG CATATTGTGG TTTCTGGGCC CTGCAGTCCT TGTTGCTTCC
TTCATTTTTC CCTCACTCTA TTTACGCAAA GTGCTTTCCA TCATTTTTGA GGACTCTTTG TTAACAGATT TCCTCATCTT
ATTCTTCACA GAGGCAATTT TCTACTGTGG TGTTGCGGTA TTCCTTTTCC TACTGGACCA TTTAAGAAGA CCCATGGTAC
TGGATACTGC TACAATCAAT AGTGATACAC CACCCCCACA GTTGGGACAA AGAGTCTCTT CTGTTGCTAC TCTTGTGCTT
AGTCTAGTAA TTCCAATGGT AACTATGGGT TTTGTCTGGC CATGGACTGG CCCTGCAGCC TCTGCAACTC TCGCTCCATA
CCTTGTTGGT ATAGTTGTCC AATTTGCATT TGAGCAGTAT GCCAGATATA GAAAGTCACC GTCACGGTCT GCCATTCCAT
TAATCTTTCA AGTGTACAGG CTTCACCAAC TAAATAGAGC AGCACAACTG GTGACAGCTT TATCATTTAC AGTCAGAGGA
GCTGAAATGA CCTCACACAA CATGGCTATA AACAGCTCTT TGGGTACCCT TCTAAATGTC CTACAATTCC TTGGTGTGAT
TTGCATTTGG TCCCTGTCTA GCTTCCTCAT GAGATTTATC CCTTATGCTT CAACAACTAT GCAGTAA

>Vigan.02G238800.01
MANAKFGSSF SCSAASLSSS PLQRTRSAQL SLSQGLFVNQ LTGAQLQMYT KDKSCQLKFM HGMLNFKGRL QKQHNALFVV
SEDRELETTT LVPENNDIVV EGISPASNLY FHLSGSDGKS GLISFYNRPY RRNSKILLSN SERSQNSILW FLGPAVLVAS
FIFPSLYLRK VLSIIFEDSL LTDFLILFFT EAIFYCGVAV FLFLLDHLRR PMVLDTATIN SDTPPPQLGQ RVSSVATLVL
SLVIPMVTMG FVWPWTGPAA SATLAPYLVG IVVQFAFEQY ARYRKSPSRS AIPLIFQVYR LHQLNRAAQL VTALSFTVRG
AEMTSHNMAI NSSLGTLLNV LQFLGVICIW SLSSFLMRFI PYASTTMQ*