GBrowse Details

Vigan.02G224500.01

Basic Information:
Name: Vigan.02G224500.01
Multiple alignment
Variant Information
Position: Chr02:30825832..30828317 (+ strand)
Length: 2486
Functional Information:
Description: Similar to Uncharacterized protein. [I1JXM8, Glycine max]
GO: Cellular Component: integral to membrane (GO:0016021)
InterPro: SWEET sugar transporter (IPR004316)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.65,0.02,102.96,0.25,148.85,877.29,44.04,8.38
Arabidopsis thaliana homolog: AT5G50790.1
Automatic updates:
Name: NM_001250489 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter SWEET16 (GMSWEET16), mRNA.
PubMed ID: 26162601 NCBI(pubmed)
Status: Known Variant
Name: NM_001255803 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter SWEET17 (GMSWEET17), mRNA.
PubMed ID: 26162601 NCBI(pubmed)
Status: Known Variant
Name: NM_001357910 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max sugar efflux transporter SWEET4 (GMSWEET4), mRNA.
PubMed ID: 26162601 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr02:30825832..30825843 (+ strand)
Length: 12
Type: five_prime_UTR
Position: Chr02:30825844..30826081 (+ strand)
Length: 238
Type: CDS
Position: Chr02:30826375..30826411 (+ strand)
Length: 37
Type: CDS
Position: Chr02:30826490..30826703 (+ strand)
Length: 214
Type: CDS
Position: Chr02:30826801..30826962 (+ strand)
Length: 162
Type: CDS
Position: Chr02:30827196..30827315 (+ strand)
Length: 120
Type: CDS
Position: Chr02:30827735..30827950 (+ strand)
Length: 216
Type: CDS
Position: Chr02:30827951..30828317 (+ strand)
Length: 367
Type: three_prime_UTR

>Vigan.02G224500.01 class=Sequence position=Chr02:30825832..30828317 (+ strand)
CTTGCATGTT GCATGCGACT TCTGCTGCTT CTCTTTTCGC ACTATAAATA CCTTCTCATT CTTCCCTTAA CGACTCGTGC
AATCGAAAGA GAGAAAGAGA TAACCTCAAC TGAGGCTTCT CACTTTCAGA ATCGTATCTA CCCTTTTCTT CACCACTCCG
TGAGTGATAG AGAAGAGTTA TTAGATTCCA CACACGACAC CAAAATGGCC ATTAACCATG AAACTTGGGC TTTTGTTTTT
GGCCTTCTAG GTATACAAAT ACTATCACTT TTTTTCTTTT CTTCTTTCTT TTCTTAAGTG CCCTAGTTCT TTCTACCATC
TGCATCATAT GCTTCACCAT CTTTCACCCT CAGTTTTCCC TTCTCTTCAA TCTTGCGTGT TATCGCAAAT ACATAAAATC
AACGTTAGAT TTTCATCGCA TTTCACCGCA TGTTTATTCT ATAACATGCA TACTTAATTA TATTAGTGTG AAACCTGTAT
TGGTTCCTGT TTGTTCACCA CTGGCTAATG AGTGTTTCTT GTATTTTTGT TGTGTTGTTA TAGGCAACGT CATCTCCTTC
ATGGTGTTCC TTGCTCCATT GTAAGTGATT TTTTCTACTT TACAATAATG GACGCTGAAG TATTTTGCTA ACTATATATG
AATTATATTC GATTGCAGAC CAACATTTTA CCAAATCTAC AAGAAGAAAA CTGCAGAAGG ATTTCAATCG CTGCCATATG
TTGTTGCACT GTTCAGCTCA ATGCTCTGGA TTTACTACGC ACTCGTGAAG AAGGATGCTA GCCTCCTTCT TATTACCATT
AACTCCTTTG GATGTGTGAT TGAGTCAATT TACCTTCTCA TCTTCCTAGT TTATGCCCCA AGTAAAACCA GGGTATTCTT
TCTCATAACT TTTATATATA CCCATTCCTT CTTCTCCTTC TTCTCAAGAA TAAATGATAA ATTGGTTTTC CTTCTGTCAA
ATGTTTCAGC TTTCGACCAT CAAGCTTCTT CTCTTGTTGA ATGTTTTTGG GTTCGGAGCC ATGCTTCTTT CAACCCTCTA
CTTTACAAAA GGATCCAAAC GTCTTTCTGT TATTGGATGG ATTTGCCTAG TTTTCAACAT TAGTGTGTTT GCTGCTCCTC
TCTGCATTCT GGTAATTATT TAGAAGCCCA TTATTTAATT CATAAAGAGA ATGACTAGGC AGATAACTTT AAATGGAGCT
TCTTTTTCCA AGATTTTCTC TTTTCGTCTA TTATTACTTG TTTTATTTTT CAATACACAT TTCACTTACT TTGGCAACTA
TTACTTCATC TTCAACATTT TTCACCTTTA CGTAATATAT ATGCTTTCAA AGAGAAATCA AATTCTCATA ATTGATACAT
GCAGAAACGT GTGATCCAAA CCAAGAGCGT GGAATTCATG CCTTTCAGTT TGTCCTTCTT TTTGACTGTA AATGCTGTCA
TGTGGTTCTT CTATGGCCTT CTTCTCAAGG ACTACTACAT CGCTGTAAGT ACAATTCAAT ATTGCTACGT TAGCCTTGGA
CCATATTATA TGGACCATTA AATCTTTGTC TATCTTAACA AACACTTTTC CTTTATCACT ACTTTTGTGA TATATATATA
TATATATATA TATATATATA TATATTTGAG CTAGATCTCC TAACTTTTTT TTATGCCTCT ATAATTTAGT GAAGAGTCAA
TTTAACTAGA GCAATTAATT AAACGTATGC TCACTCCATT AGAGTTGAGT TCATCACATG AAAATAAAAA ATAGCCAAAC
GGAAACATGG GTCCATATTA TATTATTTTT TAATGACAAA AGGTTTAAAT GTTTAAATGC AAGGGAATAT TAATTTTATT
CCTTCATAAA AGAACTACTT TGATTAAACA GAAGGATCTA ACATTTGCAT TTGAATGATG CAGCTCCCAA ATACGCTTGG
ATTTGTGTTT GGGATAATTC AGATGGTGCT GTATTTGGTT TATAGAAACG CAAAGCCAAA GACATTGGAG GAGCCAACCA
AGTTACAGGA ACTAAATGGC CATATTGTTG ACGTGGTGAA GTTGGGAACA ATGACACCCT CAGAGCCGAA TCATGTCACA
AAAAGTGGTG CTGTGACGGA GACAGCTAGC AACGTTTGAT GAACCAAGCA ATGAACAAGT CCAAAGAGAA CGAAAAGAAA
ATGAGGTCCC AAAAATATTA ACCTAAAAGT AAAACCATTT TATGGGGTCT CATCTCAACG CAAGAACAAC AGTATGTGTA
GTTTGGTGTT TAGGGTTCTT CTTTTGTTAG GTGGTGAATT ATGTTAGCAA GCATGAACGT CTCTTTGGTC TCTTCTTCCA
TCACTCTCAC TGTAGTAAAA TGTGTAGCAT AGTCGTGTGT TGTCTTCTTT CGGTGTGTAC CTCAGTCAAA CTCGTTAAAT
TCTCTCTTTC CTTGTACGCG TAATCTATGT TCATGTTATG GGAATTAATT ATTTTACGGG TTATGAAATC TATGACTATT
TGGCAC

>Vigan.02G224500.01
CTTGCATGTT GCATGCGACT TCTGCTGCTT CTCTTTTCGC ACTATAAATA CCTTCTCATT CTTCCCTTAA CGACTCGTGC
AATCGAAAGA GAGAAAGAGA TAACCTCAAC TGAGGCTTCT CACTTTCAGA ATCGTATCTA CCCTTTTCTT CACCACTCCG
TGAGTGATAG AGAAGAGTTA TTAGATTCCA CACACGACAC CAAAATGGCC ATTAACCATG AAACTTGGGC TTTTGTTTTT
GGCCTTCTAG GCAACGTCAT CTCCTTCATG GTGTTCCTTG CTCCATTACC AACATTTTAC CAAATCTACA AGAAGAAAAC
TGCAGAAGGA TTTCAATCGC TGCCATATGT TGTTGCACTG TTCAGCTCAA TGCTCTGGAT TTACTACGCA CTCGTGAAGA
AGGATGCTAG CCTCCTTCTT ATTACCATTA ACTCCTTTGG ATGTGTGATT GAGTCAATTT ACCTTCTCAT CTTCCTAGTT
TATGCCCCAA GTAAAACCAG GCTTTCGACC ATCAAGCTTC TTCTCTTGTT GAATGTTTTT GGGTTCGGAG CCATGCTTCT
TTCAACCCTC TACTTTACAA AAGGATCCAA ACGTCTTTCT GTTATTGGAT GGATTTGCCT AGTTTTCAAC ATTAGTGTGT
TTGCTGCTCC TCTCTGCATT CTGAAACGTG TGATCCAAAC CAAGAGCGTG GAATTCATGC CTTTCAGTTT GTCCTTCTTT
TTGACTGTAA ATGCTGTCAT GTGGTTCTTC TATGGCCTTC TTCTCAAGGA CTACTACATC GCTCTCCCAA ATACGCTTGG
ATTTGTGTTT GGGATAATTC AGATGGTGCT GTATTTGGTT TATAGAAACG CAAAGCCAAA GACATTGGAG GAGCCAACCA
AGTTACAGGA ACTAAATGGC CATATTGTTG ACGTGGTGAA GTTGGGAACA ATGACACCCT CAGAGCCGAA TCATGTCACA
AAAAGTGGTG CTGTGACGGA GACAGCTAGC AACGTTTGAT GAACCAAGCA ATGAACAAGT CCAAAGAGAA CGAAAAGAAA
ATGAGGTCCC AAAAATATTA ACCTAAAAGT AAAACCATTT TATGGGGTCT CATCTCAACG CAAGAACAAC AGTATGTGTA
GTTTGGTGTT TAGGGTTCTT CTTTTGTTAG GTGGTGAATT ATGTTAGCAA GCATGAACGT CTCTTTGGTC TCTTCTTCCA
TCACTCTCAC TGTAGTAAAA TGTGTAGCAT AGTCGTGTGT TGTCTTCTTT CGGTGTGTAC CTCAGTCAAA CTCGTTAAAT
TCTCTCTTTC CTTGTACGCG TAATCTATGT TCATGTTATG GGAATTAATT ATTTTACGGG TTATGAAATC TATGACTATT
TGGCAC

>Vigan.02G224500.01
ATGCGACTTC TGCTGCTTCT CTTTTCGCAC TATAAATACC TTCTCATTCT TCCCTTAACG ACTCGTGCAA TCGAAAGAGA
GAAAGAGATA ACCTCAACTG AGGCTTCTCA CTTTCAGAAT CGTATCTACC CTTTTCTTCA CCACTCCGTG AGTGATAGAG
AAGAGTTATT AGATTCCACA CACGACACCA AAATGGCCAT TAACCATGAA ACTTGGGCTT TTGTTTTTGG CCTTCTAGGC
AACGTCATCT CCTTCATGGT GTTCCTTGCT CCATTACCAA CATTTTACCA AATCTACAAG AAGAAAACTG CAGAAGGATT
TCAATCGCTG CCATATGTTG TTGCACTGTT CAGCTCAATG CTCTGGATTT ACTACGCACT CGTGAAGAAG GATGCTAGCC
TCCTTCTTAT TACCATTAAC TCCTTTGGAT GTGTGATTGA GTCAATTTAC CTTCTCATCT TCCTAGTTTA TGCCCCAAGT
AAAACCAGGC TTTCGACCAT CAAGCTTCTT CTCTTGTTGA ATGTTTTTGG GTTCGGAGCC ATGCTTCTTT CAACCCTCTA
CTTTACAAAA GGATCCAAAC GTCTTTCTGT TATTGGATGG ATTTGCCTAG TTTTCAACAT TAGTGTGTTT GCTGCTCCTC
TCTGCATTCT GAAACGTGTG ATCCAAACCA AGAGCGTGGA ATTCATGCCT TTCAGTTTGT CCTTCTTTTT GACTGTAAAT
GCTGTCATGT GGTTCTTCTA TGGCCTTCTT CTCAAGGACT ACTACATCGC TCTCCCAAAT ACGCTTGGAT TTGTGTTTGG
GATAATTCAG ATGGTGCTGT ATTTGGTTTA TAGAAACGCA AAGCCAAAGA CATTGGAGGA GCCAACCAAG TTACAGGAAC
TAAATGGCCA TATTGTTGAC GTGGTGAAGT TGGGAACAAT GACACCCTCA GAGCCGAATC ATGTCACAAA AAGTGGTGCT
GTGACGGAGA CAGCTAGCAA CGTTTGA

>Vigan.02G224500.01
MRLLLLLFSH YKYLLILPLT TRAIEREKEI TSTEASHFQN RIYPFLHHSV SDREELLDST HDTKMAINHE TWAFVFGLLG
NVISFMVFLA PLPTFYQIYK KKTAEGFQSL PYVVALFSSM LWIYYALVKK DASLLLITIN SFGCVIESIY LLIFLVYAPS
KTRLSTIKLL LLLNVFGFGA MLLSTLYFTK GSKRLSVIGW ICLVFNISVF AAPLCILKRV IQTKSVEFMP FSLSFFLTVN
AVMWFFYGLL LKDYYIALPN TLGFVFGIIQ MVLYLVYRNA KPKTLEEPTK LQELNGHIVD VVKLGTMTPS EPNHVTKSGA
VTETASNV*