GBrowse Details

Vigan.02G141600.01

Basic Information:
Name: Vigan.02G141600.01
Multiple alignment
Variant Information
Position: Chr02:12858286..12861411 (- strand)
Length: 3126
Functional Information:
Description: Similar to Uncharacterized protein. [I1KAF0, Glycine max]
GO: Molecular Function: protein binding (GO:0005515)
InterPro: Glutathione S-transferase, N-terminal (IPR004045)
Glutathione S-transferase, C-terminal-like (IPR010987)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.99,4.11,3.63,9.78,6.06,0.77,1.17,6.52
Automatic updates:
Name: KM818419 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max TCHQD class glutathione S-transferase (TCHQD1) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Name: NM_001317681 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max glutathione S-transferase TCHQD-like (LOC100792543), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:12858286..12858645 (- strand)
Length: 360
Type: three_prime_UTR
Position: Chr02:12858646..12859240 (- strand)
Length: 595
Type: CDS
Position: Chr02:12860183..12860391 (- strand)
Length: 209
Type: CDS
Position: Chr02:12860392..12861411 (- strand)
Length: 1020
Type: five_prime_UTR

>Vigan.02G141600.01 class=Sequence position=Chr02:12858286..12861411 (- strand)
GCTTCTTCTC CTTCTGGTAT ATTCTCATTC ATTTCATTCC TTCTCATGCT CATCTTGTCT TCTCTGTGCT TTCACTTCAT
TTTGCTGGGT TTCTCAATTA TTTTATGGAA TTCTATACTT CTACGCATCA ATTGTTTTTA TTTTCTCCAT GAATCTTCTG
AACTCCGTTA CCCTTAACCC CATCTAATAT TTATTAACTT CTTCTGATCA TTGAAACTAT CTGTGTTGGG TTGGGTTGGG
TTGGGCTGAT ACCTTATCCA ATCCTTAACT TTTGGGGTTG GATCATGGTT TCTTTTTGGG TGTTCCTTTA TTTTTCATAT
ACGTCTGAAT GTAGACCTCA TATGTGTATC GATTTTTTTT CTTATGTGAA TAATACATCA TTGCTTAAAA CTGATATAAG
ACTAACAATC AACGCTACCT GTCTGTCGAT TTTCTTGTAT TTGGAATGAT AGGAATACGA ATTTGGATTT TGCTGAGTTT
TTTTCACTGT TCTCTGCTGT ACCATAAAAT ACACTGATAT ATAATGATTT TGATGTTTTA AAATATATTA AAAGTCCTTT
TAATATATCA AAGTAGTGTA TTTTGACAAC TGGGATACCA CAAAACAGCC TTAGCAGAGA AAATGAATTC TAGGAATACA
TACTTAAATA TGTGGCTTTG AAATTTCTGT GTTTTGAATC GATTATTTAT TATGTATGAC ATGTGGCATT AGTTCTTCTC
TGGATGCTTC TTGCACAGGC CGGCTAATTT CTAAATAATT AGTGACTAGA AAAATATGTT TTATCCTTTT CTTGACCCTG
TCTCACATTC TCCCTTATTG ATTGCTGGCC TTTCACATGA TTTTGTATTT CGTAAGCTTT AATTATAGAA TTTTAATTAT
GATTGCAGAT GTTGCTTACT GACAACTTGG ATACCAATGT TTTGCAGACT TCAGTGTTCT GAAAGATTTC TGGTGTTGGC
GCATACATAT TTCACCTCTA GCACATCCTG CTTCTCCCTA ATTCCTTAGG TGATAAGAAA ATGCAATTGT ATCATCATCC
ATTTGATTTG GACAGCCAGA AGGTGAGACT TGCGTTGGAA GAGAAAAGCA TTGATTACAC ATCACACCAT GTCAATCCTG
TAACTGGCAA GAACTTGGAT TCTTCATTCT TCAAGATGAA TCCTGGTGGA AGACTCCCAG TTTTCCAAAA TGGCTCTCAC
ATTCTTTACA AGACTATTGA TATAATCCAG TATACCCTCT TCACAACTTA TTCTGTCATC CTCCTCTTAA TGTTATTTCT
TCCTTTTGTA AACATTTATA TAAAACGTGG ATTTTAAGTT TAACTCAACA TTGCAAAATA GGCTTAGTAT GGCAAGTTTC
TATCCACTTT GGTCATATTT AAACCCTCTG CATGCTGAGA ACTGGATATT TTGAGTGTGG GAATAGAAAA TTCACTAAAA
GTTTAATAAA GCTTACTAGG ATAGATACCG AAAAAAACTG TTACACTATC TTATGAAGTA GTTCTAATAC CATCTTAAAC
CGTAGGAAAA GAGAAACATT AAGCTGAAAT TATGTTTCTC AGACAGTACA AATGTCTTAT TTATATTGAA AAAAATAAAT
CAATACAATG TATAAAATTT GGCATCTTTT GACAACAAAG ATATAAATAG AAAAGTTCTT AATAATATAT GTGTTCCTGA
TTATATAGGG TTAGCTCTTA TTTCTTTGAT TCTATTCTAC TTTGAAGATT TATGCAGCAT TAGAAGTTAT CCCCACAGAA
ATATATTTAG CTGACAGAGC TTCTTTCGAA ATCTTTATCA AGGAATGGAT TATCTCATGT TGAGTTTCCA CATGAACATA
ATTTCAAATG AAAAATGTCT CTTCATAGAA ATTAAGTAGG TAGGACTATA TTAAAATTTG TGAAATTCAC AGAGAAAAAC
ACAATTTTTA CATGACACGG CCATGTGGAA ATTCTGCACG AGAGAATCCG TTATCGATTT ATCACTTTCC AAGTCAATTC
CCTTAGAGCA ACAATTGCAG CATTCTATAT GCTACTGTGG ATAAAGGAGT GGTTTCCACA GTTGCTTGAT AAAGCTTAAT
CCCTTAACCT AAATGTTGAA GTTGAATTAC TTTCAAATGC TTTTATGTTA ACTTTATGAG TGGACATTTT ATAGTGGTAT
TGGATTTTCA GGTACATAGA AAGAATTGCC GTGTTCTCCT CTGGGTCTGA AAATATCAGT AGCAGTAACA AGGAAGTGAT
TGAATGGATG CAGAAGGTAC AAGAGTGGAA TCCAAAGTAT TTTTCCCTTT CCCATGTACC AGAGAAATAC AGAATATATG
TTTCTAAGTT CTTAAGAAGA GTGGTGATTG CTCGAATGTC TGAGTCACCA GAACTAGCAG GTGCTTACCA TAAGAAGTTA
AAAGAAGCAT ATCAGACTGA AGAGAGAGTG AAAGATTCAG ATGTGTTTAT AAGGAGCAAG GAGCATTTGA TTAGGCTGCT
TGATGAAGCA GAGAAGCAGC TGAGTGAAAC ACCTTATTTA GCAGGTCAAG AGTTTACTAT GGCTGATGTG ATGCTCGTTC
CAGTATTGTC TCGTTTAGTG CTCTTGGATT TAGAGAAAGA GTACATAACT GGGAGGCCAA ACATTGCTGA GTATTGGGTT
TTGGTTCAGC AGAGGCCTAG TTATAAGAAA GTGATTGGTA GGTATTTTGA TGGTTGGAAA AAGCATAAGA CATTGTTAAA
AACTTGGTGC TTTGTTCGCG TTAGAAGTTT GCTGAAGAGA TATTGATGAA GTGTATGTTA GTTGCCCAAA GAAAACTGCA
TAAGTGAATA TAAGAAAGAG CTTTTGTGTG TTGTAGATGA GTTGTTGTTA TCATAAACAT TGTTTGTATT TTCCCTTTTT
GGTGACAAGA ATAATTTTTT TGGAGAGAAA AGGGGGATTC ATTTTTCTTT CTCCCTTAGC AAATGGTGAT GCTGAGTACT
GAGCTTGGAT TTGAGTACTG AGCTTGGATT TGTGTTAGTT CAATCAATTA GCAATTTATG TGCAATGTTG TACCCTGATA
TGGGAAGAAT TCCTTCATAT GAGAATCGTT ACTTGTTTTG TGTACACTTA TTTAGTATTT GTAAATGCAA AAGCAACGTA
CTCTCA

>Vigan.02G141600.01
GCTTCTTCTC CTTCTGGTAT ATTCTCATTC ATTTCATTCC TTCTCATGCT CATCTTGTCT TCTCTGTGCT TTCACTTCAT
TTTGCTGGGT TTCTCAATTA TTTTATGGAA TTCTATACTT CTACGCATCA ATTGTTTTTA TTTTCTCCAT GAATCTTCTG
AACTCCGTTA CCCTTAACCC CATCTAATAT TTATTAACTT CTTCTGATCA TTGAAACTAT CTGTGTTGGG TTGGGTTGGG
TTGGGCTGAT ACCTTATCCA ATCCTTAACT TTTGGGGTTG GATCATGGTT TCTTTTTGGG TGTTCCTTTA TTTTTCATAT
ACGTCTGAAT GTAGACCTCA TATGTGTATC GATTTTTTTT CTTATGTGAA TAATACATCA TTGCTTAAAA CTGATATAAG
ACTAACAATC AACGCTACCT GTCTGTCGAT TTTCTTGTAT TTGGAATGAT AGGAATACGA ATTTGGATTT TGCTGAGTTT
TTTTCACTGT TCTCTGCTGT ACCATAAAAT ACACTGATAT ATAATGATTT TGATGTTTTA AAATATATTA AAAGTCCTTT
TAATATATCA AAGTAGTGTA TTTTGACAAC TGGGATACCA CAAAACAGCC TTAGCAGAGA AAATGAATTC TAGGAATACA
TACTTAAATA TGTGGCTTTG AAATTTCTGT GTTTTGAATC GATTATTTAT TATGTATGAC ATGTGGCATT AGTTCTTCTC
TGGATGCTTC TTGCACAGGC CGGCTAATTT CTAAATAATT AGTGACTAGA AAAATATGTT TTATCCTTTT CTTGACCCTG
TCTCACATTC TCCCTTATTG ATTGCTGGCC TTTCACATGA TTTTGTATTT CGTAAGCTTT AATTATAGAA TTTTAATTAT
GATTGCAGAT GTTGCTTACT GACAACTTGG ATACCAATGT TTTGCAGACT TCAGTGTTCT GAAAGATTTC TGGTGTTGGC
GCATACATAT TTCACCTCTA GCACATCCTG CTTCTCCCTA ATTCCTTAGG TGATAAGAAA ATGCAATTGT ATCATCATCC
ATTTGATTTG GACAGCCAGA AGGTGAGACT TGCGTTGGAA GAGAAAAGCA TTGATTACAC ATCACACCAT GTCAATCCTG
TAACTGGCAA GAACTTGGAT TCTTCATTCT TCAAGATGAA TCCTGGTGGA AGACTCCCAG TTTTCCAAAA TGGCTCTCAC
ATTCTTTACA AGACTATTGA TATAATCCAG TACATAGAAA GAATTGCCGT GTTCTCCTCT GGGTCTGAAA ATATCAGTAG
CAGTAACAAG GAAGTGATTG AATGGATGCA GAAGGTACAA GAGTGGAATC CAAAGTATTT TTCCCTTTCC CATGTACCAG
AGAAATACAG AATATATGTT TCTAAGTTCT TAAGAAGAGT GGTGATTGCT CGAATGTCTG AGTCACCAGA ACTAGCAGGT
GCTTACCATA AGAAGTTAAA AGAAGCATAT CAGACTGAAG AGAGAGTGAA AGATTCAGAT GTGTTTATAA GGAGCAAGGA
GCATTTGATT AGGCTGCTTG ATGAAGCAGA GAAGCAGCTG AGTGAAACAC CTTATTTAGC AGGTCAAGAG TTTACTATGG
CTGATGTGAT GCTCGTTCCA GTATTGTCTC GTTTAGTGCT CTTGGATTTA GAGAAAGAGT ACATAACTGG GAGGCCAAAC
ATTGCTGAGT ATTGGGTTTT GGTTCAGCAG AGGCCTAGTT ATAAGAAAGT GATTGGTAGG TATTTTGATG GTTGGAAAAA
GCATAAGACA TTGTTAAAAA CTTGGTGCTT TGTTCGCGTT AGAAGTTTGC TGAAGAGATA TTGATGAAGT GTATGTTAGT
TGCCCAAAGA AAACTGCATA AGTGAATATA AGAAAGAGCT TTTGTGTGTT GTAGATGAGT TGTTGTTATC ATAAACATTG
TTTGTATTTT CCCTTTTTGG TGACAAGAAT AATTTTTTTG GAGAGAAAAG GGGGATTCAT TTTTCTTTCT CCCTTAGCAA
ATGGTGATGC TGAGTACTGA GCTTGGATTT GAGTACTGAG CTTGGATTTG TGTTAGTTCA ATCAATTAGC AATTTATGTG
CAATGTTGTA CCCTGATATG GGAAGAATTC CTTCATATGA GAATCGTTAC TTGTTTTGTG TACACTTATT TAGTATTTGT
AAATGCAAAA GCAACGTACT CTCA

>Vigan.02G141600.01
ATGCAATTGT ATCATCATCC ATTTGATTTG GACAGCCAGA AGGTGAGACT TGCGTTGGAA GAGAAAAGCA TTGATTACAC
ATCACACCAT GTCAATCCTG TAACTGGCAA GAACTTGGAT TCTTCATTCT TCAAGATGAA TCCTGGTGGA AGACTCCCAG
TTTTCCAAAA TGGCTCTCAC ATTCTTTACA AGACTATTGA TATAATCCAG TACATAGAAA GAATTGCCGT GTTCTCCTCT
GGGTCTGAAA ATATCAGTAG CAGTAACAAG GAAGTGATTG AATGGATGCA GAAGGTACAA GAGTGGAATC CAAAGTATTT
TTCCCTTTCC CATGTACCAG AGAAATACAG AATATATGTT TCTAAGTTCT TAAGAAGAGT GGTGATTGCT CGAATGTCTG
AGTCACCAGA ACTAGCAGGT GCTTACCATA AGAAGTTAAA AGAAGCATAT CAGACTGAAG AGAGAGTGAA AGATTCAGAT
GTGTTTATAA GGAGCAAGGA GCATTTGATT AGGCTGCTTG ATGAAGCAGA GAAGCAGCTG AGTGAAACAC CTTATTTAGC
AGGTCAAGAG TTTACTATGG CTGATGTGAT GCTCGTTCCA GTATTGTCTC GTTTAGTGCT CTTGGATTTA GAGAAAGAGT
ACATAACTGG GAGGCCAAAC ATTGCTGAGT ATTGGGTTTT GGTTCAGCAG AGGCCTAGTT ATAAGAAAGT GATTGGTAGG
TATTTTGATG GTTGGAAAAA GCATAAGACA TTGTTAAAAA CTTGGTGCTT TGTTCGCGTT AGAAGTTTGC TGAAGAGATA
TTGA

>Vigan.02G141600.01
MQLYHHPFDL DSQKVRLALE EKSIDYTSHH VNPVTGKNLD SSFFKMNPGG RLPVFQNGSH ILYKTIDIIQ YIERIAVFSS
GSENISSSNK EVIEWMQKVQ EWNPKYFSLS HVPEKYRIYV SKFLRRVVIA RMSESPELAG AYHKKLKEAY QTEERVKDSD
VFIRSKEHLI RLLDEAEKQL SETPYLAGQE FTMADVMLVP VLSRLVLLDL EKEYITGRPN IAEYWVLVQQ RPSYKKVIGR
YFDGWKKHKT LLKTWCFVRV RSLLKRY*