GBrowse Details

Vigan.02G132500.01

Basic Information:
Name: Vigan.02G132500.01
Multiple alignment
Variant Information
Position: Chr02:11850664..11854426 (+ strand)
Length: 3763
Functional Information:
Description: Similar to Uncharacterized protein. [I1KA86, Glycine max]
GO: Cellular Component: membrane (GO:0016020)
InterPro: Drug/metabolite transporter (IPR000620)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.13,0.10,0.80,4.56,233.97,0.27,4.31,44.42
Automatic updates:
Name: NM_001255798 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100811984 (LOC100811984), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:11850664..11850795 (+ strand)
Length: 132
Type: five_prime_UTR
Position: Chr02:11850796..11850980 (+ strand)
Length: 185
Type: CDS
Position: Chr02:11851097..11851159 (+ strand)
Length: 63
Type: CDS
Position: Chr02:11851239..11851355 (+ strand)
Length: 117
Type: CDS
Position: Chr02:11852824..11853067 (+ strand)
Length: 244
Type: CDS
Position: Chr02:11853177..11853338 (+ strand)
Length: 162
Type: CDS
Position: Chr02:11853522..11853673 (+ strand)
Length: 152
Type: CDS
Position: Chr02:11853785..11853956 (+ strand)
Length: 172
Type: CDS
Position: Chr02:11853957..11854426 (+ strand)
Length: 470
Type: three_prime_UTR

>Vigan.02G132500.01 class=Sequence position=Chr02:11850664..11854426 (+ strand)
TTATGATGGC CTTCATTTCT TTCGCAGTGA GTTTCAGATA AACAAAATCA AGCAGAAGCA GTTTCACTTG ATCCCGCAGA
CGTAGCTCGG GATCAAGAAC TATAGAAAGA GAGAGTTATC AAGAAGAAAA AGATGGGTGA GTGGTTGAGA AATGCAAGGC
CCTATCTGCT GTTATTGGCT GTTCAATTTG GTTCTGCTGG GATGTTCATA TTTGCCATGG ATGCTATAAA GAAGGGTATG
AGCCATTACG TCTTCATTGT CTACCGTAAT GCCATCGCCT CTGTTACTCT CGCTCCCTTC GCCTTTGTTC TTGAAAGGTA
TCTTCCACTT ACCTTCCATG CATGCATATA CATCATTTGA CACTTTCTCA TTTAATGTTT TCTGAGTAAT ATACTAAGCA
TATTTAGCTC TTCTAAAACA AATATTTTTG CAGGAAAGTT AGGCCCAAGA TGACTTTCAG AGTATTTTCA GAGATTATGG
CACTGGCTTT CTTCGAGTAT GATTCTCTTA CACCTATTCA ACTTTCACTT TCTTATTATT GTTTACTTAA TTAAATTATA
CGATGCTACT TGCAGAATAA TACTGGATCA GTGTTTCGCT CTGTTGGGCA TGAAATTCAC GTCTGCTTCT TTCTTATCTG
CTGTCATGAA CTCTGCTCCC TCTATTACTT TTGTCATGGC AGTCATTCTA GGGTAAGTAT TCCATCAAGT AAGAATAATA
ATAATAATAA TACAAGTTAT TTTCACTTTT ACAACATTTT TTTTATCAAA CTTTCTTTCT ATTTTTGTCT ACCTTCCACT
CACATATACC CTAGAAATAA GATGCACATG TAGTTAGCAA CTTTTTATTT ATCTATTATA AATATTCCAT TTATATTTAA
TATTTCCTCT TATTTTCCTT ATTTAATTTA TTATACACAT TCCTTCGTCT TCAAACTCTG TCTTTCCATG CGAGAAGATG
CCAAATACAG GTCTATAATG CAACATTATC AAAACAATTG TATTTACCTG CAAGCTTATC TAATAAATAA AAGAAAGCCT
CTGAATAATT GTCCATAGGG GATTGGTTAG TAATGGATCA AAATGCTTCT ATAGAAAGGT TTAGGTAAAG TCCCACCAAC
GCTAGTATTG TCTTTGGTAG TATAAATTTC AAGAAAACAC CGAATATATT AATTCATTGT TTTTAAAGTC CGAGAATCAA
AGAAAGATTT ATAAAACTAA ATATAAAGCT ATTAAATTTA TTTATTTTAA AAATATCTAA TTAAAATATA TTATTATAAA
TAATATGAGG ATTCAATTTT CTCATAGTAT AATTTTCATA ACGCTCTTCT CTGATTTATA AGTACCACTT TCTATCATCT
TTGAAGCTTG ATATGACGTA ACCTTGTAAT GGAGTGATGT CCTTTTCCAA TACTTTTTAT GTACCATTTT TCTTAAAGAG
AAAAAAATAA AAACATAAAC TTGAACGGTA AGCTATAGTT ATAATTAATT CCATTTCCTT GAATCTTAAT CTCCTTCTCA
TGAATTTCGC TAGAAAGAAA TTAATAGTAT GTTTATACGT CATTTTCTAA GTTTCCCAGC ACCCACTTTA GCAGTAGAAA
ACGCATAACG AATCCTCTTC TAATTTCAAC TTACCACTTC CATGTCTACA GCTTACAAAA CACTGTATTA CAAAATCAAG
CGAGACATGG AACTTTTATG TTTTAAACTG ATTAACTAAG TGATGATCTT ATTATTATTT TGTTTTTTAT CAATGCTTCA
TAACACATTT GTTATGAAAT ATCAATTATT ATTGTATGAA TCAGGTGCCT AGTTATAAGA GAGAAAAAAT AACATAAGTG
TATTTAGGTA TACTTTATGC AAAGGATAAA AGATGTAAAC CAATATTTAT GAAATGTGGA AAAGGTACGA AATTATAATG
ACCAGAAAAA CACGGAAAGT TTCAGCCACA ACATATAATT TTAGGTGGAG TGTTTCAGCC ACAATATAGA TATGCTTAAT
GCACCTTTCC TCTTGATTCA ATCTAGCATT CAAAACAAAA GCACTAGTGC GAAAAACGTA TAGACACGTA ATAACGACAA
AAGCACAAAT CTTCCTTTTT GTTTTATGGG TTGGAAGAGA ATCATAGTTA TAAACATTTA ATTTTTTTTT TAATGAGCAG
AATGGAGCAC ATGAAAATTA AGGAGGTAGC ATGTCAAGCA AAAGTGATTG GCACCGTAGT AACATTTGGA GGAACCTTGC
TTATGGCACT GTACAAAGGC CCCGTCCTCA GTTTCATGAG ATCTTCGACC AGCCATGCGA GCCAAACTGA GAACGTGACC
AACCCCACTG GCAACCATTG GGTAATAGGA ACAGTGTTCC TCCTCATTGG TTGTGCAGGC TTTTCTGCAT TTTACATATT
ACAGGTATAT AACGCACCTT CTTATACTAA TTAAGTTTCA CATATAATAA TAAGATGAAA TATCTGTGGA TATCTTTGGA
GAAATTAATG ATTGGTGGTT TGGTGATATG TAGGCCATAA CATTGAGAAA ATACCCAGCA GAGATGTCGT TGGCCACTTG
GGTTTGCTTT GTAGGAGCAC TTCAAAGCTC TATTGTTGCA ATCTTCGCAG AACGCCACCA CCCTCATGCT TGGTCCCTTG
GTTGGGACAC ACGACTCTTT GCCCCTGCTT ACGCGGTCAG TGCTTTTGGA TTGGATTCAT AGTACAGTAA TAAGTACCTA
ACACAACTGT TTGGTCTGAA AATGACACCA TAATTTACGA CACCATCCTA GTTGCAGTTG TATTGCACCC ATGCTCCCTT
TTTCTAACCT TACAGTTTTC TTAATCAGTG TTCTTAACCT ACTACTGATT CATTACAGGG AATAGTTACA TCAGGAGTTC
AGTATTATAT ACAAGGCATG GTGATAAAAA CCATGGGTCC AGTTATTGTG ACTGCTTTCA ATCCTCTGCG TATGATCATT
GTTACGGGCT TGGCCTGCAT CATCCTATCT GAGCAACTCT ACCTTGGAAG GTACTACAAA TTAAGTAGCA AATGGTTCAA
TTCATATCTT CATCGTCCAG ATTTTTTTCT TCTCTTTACT AACCCTATTA ATTTCCCTTA TTTGTATGCT TGATATATCA
GTATAATTGG AGCAATAGTT GTTGTACTGG GGCTTTATCT AGTAGTGTGG GGAAAAGCTA AAGAACGCAG AGGTCTGACG
CCACCATCTC CTACAGAGGG TAACTTTCCC GAAGATCAAC GACAGCTACC GGTCACAGCT CCAAGGAATG ATAACGATGA
CAATAAGGCT TAAGTAGTGC ATGGCCATAA TATAAAAAAG TGACGTGGAA GGCACAATAT AATGAGATGA GAAAGTCAGA
AAAAATTAAG TAGGTCTCGG CTATGTCTAA TGAGACATTG GTGTAGCATT TCCGTACAAC TGGTTTAATG TCAATGTCAT
GCAATTTACT CATATATACC ATGAAATTGG TGGGACAGGT GTCATGACCA TGCATGAAAT TCATCATATA TATATATATA
TATAATTAGT GGCCCTTTTA GCTCCATCAT TGTTCTATAG TTGTATAACT TATTTTCTCC ATCATGGACT AATTTGGATT
GCCACTTTTA AGTATTACAT TTCAGGGCTA TAAAAGAAAT TAACACCATA TAAACTAAAG GTTGCAGATT CTAATGCAAG
TTTAATCTCC AGCTTCTACT AATATATCCG GCATCTATGT CCAACTCATG ATTGATTGAA CAAAATAACA TACTTTTACG
AGG

>Vigan.02G132500.01
TTATGATGGC CTTCATTTCT TTCGCAGTGA GTTTCAGATA AACAAAATCA AGCAGAAGCA GTTTCACTTG ATCCCGCAGA
CGTAGCTCGG GATCAAGAAC TATAGAAAGA GAGAGTTATC AAGAAGAAAA AGATGGGTGA GTGGTTGAGA AATGCAAGGC
CCTATCTGCT GTTATTGGCT GTTCAATTTG GTTCTGCTGG GATGTTCATA TTTGCCATGG ATGCTATAAA GAAGGGTATG
AGCCATTACG TCTTCATTGT CTACCGTAAT GCCATCGCCT CTGTTACTCT CGCTCCCTTC GCCTTTGTTC TTGAAAGGAA
AGTTAGGCCC AAGATGACTT TCAGAGTATT TTCAGAGATT ATGGCACTGG CTTTCTTCGA AATAATACTG GATCAGTGTT
TCGCTCTGTT GGGCATGAAA TTCACGTCTG CTTCTTTCTT ATCTGCTGTC ATGAACTCTG CTCCCTCTAT TACTTTTGTC
ATGGCAGTCA TTCTAGGAAT GGAGCACATG AAAATTAAGG AGGTAGCATG TCAAGCAAAA GTGATTGGCA CCGTAGTAAC
ATTTGGAGGA ACCTTGCTTA TGGCACTGTA CAAAGGCCCC GTCCTCAGTT TCATGAGATC TTCGACCAGC CATGCGAGCC
AAACTGAGAA CGTGACCAAC CCCACTGGCA ACCATTGGGT AATAGGAACA GTGTTCCTCC TCATTGGTTG TGCAGGCTTT
TCTGCATTTT ACATATTACA GGCCATAACA TTGAGAAAAT ACCCAGCAGA GATGTCGTTG GCCACTTGGG TTTGCTTTGT
AGGAGCACTT CAAAGCTCTA TTGTTGCAAT CTTCGCAGAA CGCCACCACC CTCATGCTTG GTCCCTTGGT TGGGACACAC
GACTCTTTGC CCCTGCTTAC GCGGGAATAG TTACATCAGG AGTTCAGTAT TATATACAAG GCATGGTGAT AAAAACCATG
GGTCCAGTTA TTGTGACTGC TTTCAATCCT CTGCGTATGA TCATTGTTAC GGGCTTGGCC TGCATCATCC TATCTGAGCA
ACTCTACCTT GGAAGTATAA TTGGAGCAAT AGTTGTTGTA CTGGGGCTTT ATCTAGTAGT GTGGGGAAAA GCTAAAGAAC
GCAGAGGTCT GACGCCACCA TCTCCTACAG AGGGTAACTT TCCCGAAGAT CAACGACAGC TACCGGTCAC AGCTCCAAGG
AATGATAACG ATGACAATAA GGCTTAAGTA GTGCATGGCC ATAATATAAA AAAGTGACGT GGAAGGCACA ATATAATGAG
ATGAGAAAGT CAGAAAAAAT TAAGTAGGTC TCGGCTATGT CTAATGAGAC ATTGGTGTAG CATTTCCGTA CAACTGGTTT
AATGTCAATG TCATGCAATT TACTCATATA TACCATGAAA TTGGTGGGAC AGGTGTCATG ACCATGCATG AAATTCATCA
TATATATATA TATATATAAT TAGTGGCCCT TTTAGCTCCA TCATTGTTCT ATAGTTGTAT AACTTATTTT CTCCATCATG
GACTAATTTG GATTGCCACT TTTAAGTATT ACATTTCAGG GCTATAAAAG AAATTAACAC CATATAAACT AAAGGTTGCA
GATTCTAATG CAAGTTTAAT CTCCAGCTTC TACTAATATA TCCGGCATCT ATGTCCAACT CATGATTGAT TGAACAAAAT
AACATACTTT TACGAGG

>Vigan.02G132500.01
ATGGGTGAGT GGTTGAGAAA TGCAAGGCCC TATCTGCTGT TATTGGCTGT TCAATTTGGT TCTGCTGGGA TGTTCATATT
TGCCATGGAT GCTATAAAGA AGGGTATGAG CCATTACGTC TTCATTGTCT ACCGTAATGC CATCGCCTCT GTTACTCTCG
CTCCCTTCGC CTTTGTTCTT GAAAGGAAAG TTAGGCCCAA GATGACTTTC AGAGTATTTT CAGAGATTAT GGCACTGGCT
TTCTTCGAAA TAATACTGGA TCAGTGTTTC GCTCTGTTGG GCATGAAATT CACGTCTGCT TCTTTCTTAT CTGCTGTCAT
GAACTCTGCT CCCTCTATTA CTTTTGTCAT GGCAGTCATT CTAGGAATGG AGCACATGAA AATTAAGGAG GTAGCATGTC
AAGCAAAAGT GATTGGCACC GTAGTAACAT TTGGAGGAAC CTTGCTTATG GCACTGTACA AAGGCCCCGT CCTCAGTTTC
ATGAGATCTT CGACCAGCCA TGCGAGCCAA ACTGAGAACG TGACCAACCC CACTGGCAAC CATTGGGTAA TAGGAACAGT
GTTCCTCCTC ATTGGTTGTG CAGGCTTTTC TGCATTTTAC ATATTACAGG CCATAACATT GAGAAAATAC CCAGCAGAGA
TGTCGTTGGC CACTTGGGTT TGCTTTGTAG GAGCACTTCA AAGCTCTATT GTTGCAATCT TCGCAGAACG CCACCACCCT
CATGCTTGGT CCCTTGGTTG GGACACACGA CTCTTTGCCC CTGCTTACGC GGGAATAGTT ACATCAGGAG TTCAGTATTA
TATACAAGGC ATGGTGATAA AAACCATGGG TCCAGTTATT GTGACTGCTT TCAATCCTCT GCGTATGATC ATTGTTACGG
GCTTGGCCTG CATCATCCTA TCTGAGCAAC TCTACCTTGG AAGTATAATT GGAGCAATAG TTGTTGTACT GGGGCTTTAT
CTAGTAGTGT GGGGAAAAGC TAAAGAACGC AGAGGTCTGA CGCCACCATC TCCTACAGAG GGTAACTTTC CCGAAGATCA
ACGACAGCTA CCGGTCACAG CTCCAAGGAA TGATAACGAT GACAATAAGG CTTAA

>Vigan.02G132500.01
MGEWLRNARP YLLLLAVQFG SAGMFIFAMD AIKKGMSHYV FIVYRNAIAS VTLAPFAFVL ERKVRPKMTF RVFSEIMALA
FFEIILDQCF ALLGMKFTSA SFLSAVMNSA PSITFVMAVI LGMEHMKIKE VACQAKVIGT VVTFGGTLLM ALYKGPVLSF
MRSSTSHASQ TENVTNPTGN HWVIGTVFLL IGCAGFSAFY ILQAITLRKY PAEMSLATWV CFVGALQSSI VAIFAERHHP
HAWSLGWDTR LFAPAYAGIV TSGVQYYIQG MVIKTMGPVI VTAFNPLRMI IVTGLACIIL SEQLYLGSII GAIVVVLGLY
LVVWGKAKER RGLTPPSPTE GNFPEDQRQL PVTAPRNDND DNKA*