GBrowse Details

Vigan.02G125400.01

Basic Information:
Name: Vigan.02G125400.01
Multiple alignment
Variant Information
Position: Chr02:11042072..11045007 (+ strand)
Length: 2936
Functional Information:
Description: Similar to Uncharacterized protein. [I1JVJ7, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:6.10,4.85,3.88,2.82,6.35,3.49,5.50,4.75
Arabidopsis thaliana homolog: AT1G36310.1
Automatic updates:
Name: NM_001255237 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max alkylated DNA repair protein alkB homolog 8-like (LOC100807751), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:11042072..11042566 (+ strand)
Length: 495
Type: five_prime_UTR
Position: Chr02:11042567..11043603 (+ strand)
Length: 1037
Type: CDS
Position: Chr02:11044196..11044283 (+ strand)
Length: 88
Type: CDS
Position: Chr02:11044284..11045007 (+ strand)
Length: 724
Type: three_prime_UTR

>Vigan.02G125400.01 class=Sequence position=Chr02:11042072..11045007 (+ strand)
AATTTTTCTT AAGATTTAAG CAAAGAACCA TGGGTTTATA TTCCTTAGAC CCGACCAAAT TTGACAAACC GGGTTTTGGG
AGTGTGTTGT CGGGTCTCGG CCACCATTCA CTCAAAACAA GCATCAACCA CCGACGATGT TCGTTGCTTC AGGATTCTCT
TAGTCTCTCA TTTTTCATGA AAAACTTTAA TCACTTTTCT TATATATTCA CGAACCCTTC TGTAAGCTGG TAAGCAATAT
TTTCCCTCTA AGTTTGGAGT TTTAAGCCCC GGTCTCTTTC TAGTTTTGAT GATTCTGACC TAACTTTTCT CACATCTTCC
CATTTGGTTA TATTATTACA AGTTTGCATC TTTTGGTTTT GGGTTTTTTT ATTTGTATAT GAATATGAAT GAATCACTAT
TGGGTTATTT ATAGATTTTA TACAATAAAT GAAAGATATC ATTTGCAAAA AAAATTGCTT TTTGTGCAGG TGCTCTCTGC
CACACTGACC GGTTAATGAT TCATAGTGTT CTAAAAACAA GTAGATTCTT CAATCCACGT AGAGAAGCCC TTGGTTTGAC
CAGTGTAATT GTTGATTTTG TTTGTCATTT AGCATTTAGT TCAATGAAAC AAATCAATTG TATAGGGGAT TCTAGTTTGT
GTACTATTGC CCCCAGTAAG GAACCCTCCA TTACAGATTC CTTATCAGTC ACTGGGAACG GTACTACTTC ATCTATGAGT
GTACAATCCA CCCCTGAAAT AGAAAAGAAG TTCGTTCATC ATGTATATGA TGCTATTGCT CCGCATTTCA GTGCCACTCG
GTTTGCCAAA TGGCCGAAGG TTGCATCATT TTTGTCATCT TTGCCTTTGG GGTCTCTTGT CCTTGATGCA GGATGTGGGA
ATGGGAAATA CCTAGGTTTG AATCAGGATT GTTTCTTCAT AGGATGTGAT ATAAGTCCTT CCTTGATTAA AATCTGCTCG
GATAGAGGGC ATGAAGTTTT GGTGGCAGAT GCTGTGAATC TTCCTTACAG AACTGGTTTT GGTGATGCAG CTATATCAAT
AGCAGTGTTA CATCACTTAA GCACTGAAAG TAGAAGGAGA AAAGCAATAG AAGAATTGGT CAGAGTTGTT AAAAAGGGTG
GCCATGTTCT GATTACAGTT TGGGCTGTAG AGCAAGAGGA TACAAATCTA ATTACCAAAT GGACTCCACT GACTGAGAAG
TATGTTGAAG AGTGGGTAGG ACCAGGGAGT CCTCGTGCTC GGACACCCTC ACCCTTGCCA TTAGAAAGCA TTCCTGAGAG
TGAGGAGAGT AGCACCGGTG AGAACATAAA AGTTTGCAGT GAGTCAAATG TATGTAAAGA TTTGGAGGAA GAAAAACATA
TAAAGAACCA ACAGGAATAC TTTGTTCCCT GGCATTTACC TTATCATCGT GCTGAAATCA GTGGTGCTTC TTCTCATGCT
CTTGCTGCTG GTCTGGCAAC TAAAGATGAC AAAAAGGGTG CTGTGGTGTA TAATCGATAT TATCATGTTT TTAGTGAAGG
AGAACTTGAA AGGTAACAAA GCATGGTTTA AATTTATTTT TTCCTTTATT TTTCACTGAA GTTACTCCCT TCAGGCTTCA
TGTTTCGTAA ACTTGATCTT GGATGTCAAT TGTGCTATGA TTAGCGTACT TTACATCTGA ATCTAGAAAT ATGGATTTTA
TAAGCAAAGT ATCATGAGAT GGAGATATTA CATTCGGTAA AACCTGTTTA AGGTTCCATT TTAAACTTAA AATTGCTGCT
AGAGCGTTAG CTTGTTGTCC AATCGTAATT TTCCTTTCCC TCTATCATAA GCATTGAGTT GCTACGTGTC CTTGATAAAG
GTAAGGTGAA GATAAAAAAC ATGTAAAAAG AAATGCAATA GATTATGTTT GACAGTAAAA AAGATGGGAT TGAAGTGAGT
AGTGTCGTGC GTCATGTATC TTTTCTGCTG CTTTAATCAA TCAACTTGAA CTTTATAGGT TTATGACAAA TTTACCATGG
CCTTTTATTC TCTTGCTACT CATTTTTCAA AATTGAAAGA GTATAATGCA GAACTATGTT TGACATGCTT ATATGCAGGA
TGCTTGATTC CCCATTTCTA ACTTACTTTC ACATCCTTTT GCAGTTTGAC AGCTGGAATA ATCAATGCTA GAATCGTTGA
TCAGTTTTTT GATAAATCCA ACTGGTGTAT TATTCTCGAG AAAACAGCAT AACCTAGAAA GAAACCTGTT TGATATGTCA
AGGATCCTTG CGTGAGTATA GAAGGCCAGA GGGTTGTATG ACAACTTTTA CAAAATTTAT CTTGCAGGTT AACTTTGTCT
GGTATTCAGC TTAATATGAA TAAAAAACAT GGACAGCTGC AAAACTTTGA AAGCATTATT CTCTGGCCAT TATCATCCAG
ATCAGTCTGC ATTCTTCAAG AAAGCCTGAG TCCTTATTTT AATTTTTCTT TCTTTTTATT TGCAAAGCCC ATTTTTGGTT
ATAACAATAG GGCATGAAGT ACGCATGGCC CCTTTGTCAG CCCAAACATT GCTGAATATC TTTTATACAG GAGCATTTCT
ACAACGTCGT TTATTGGAAG TTTACACAGT TGGATTTCAC TATTTTTGTC ATGATCTGTG CTTTCTGTTC CAGTTTTGAA
GGAATTAAAA CTCTTAAAGA GCTCAAATCT AGCTCCTTTT AAATATTCCT TGAGTATGGA ATGAGCAGAG AGGTGAGAAG
GATCTTTGGT TCCCAAGTAG GATACAGTAC AACCATTGTT GGATCCTTAC CTCTAAGAAC AGTGTGCGAG CAATTTAAAA
CATGAACTTG TATTTACATA TTAAATTAAA TGTGGTAATC ACTGCAGGAT ATTTGCATAG ACAGCCGCCA GGTTTTGTTC
GGTCGTGAAT TTGTGATTTT GTAATGCCGT TTTTACTGCC AAATATCAAA TAAGCA

>Vigan.02G125400.01
AATTTTTCTT AAGATTTAAG CAAAGAACCA TGGGTTTATA TTCCTTAGAC CCGACCAAAT TTGACAAACC GGGTTTTGGG
AGTGTGTTGT CGGGTCTCGG CCACCATTCA CTCAAAACAA GCATCAACCA CCGACGATGT TCGTTGCTTC AGGATTCTCT
TAGTCTCTCA TTTTTCATGA AAAACTTTAA TCACTTTTCT TATATATTCA CGAACCCTTC TGTAAGCTGG TAAGCAATAT
TTTCCCTCTA AGTTTGGAGT TTTAAGCCCC GGTCTCTTTC TAGTTTTGAT GATTCTGACC TAACTTTTCT CACATCTTCC
CATTTGGTTA TATTATTACA AGTTTGCATC TTTTGGTTTT GGGTTTTTTT ATTTGTATAT GAATATGAAT GAATCACTAT
TGGGTTATTT ATAGATTTTA TACAATAAAT GAAAGATATC ATTTGCAAAA AAAATTGCTT TTTGTGCAGG TGCTCTCTGC
CACACTGACC GGTTAATGAT TCATAGTGTT CTAAAAACAA GTAGATTCTT CAATCCACGT AGAGAAGCCC TTGGTTTGAC
CAGTGTAATT GTTGATTTTG TTTGTCATTT AGCATTTAGT TCAATGAAAC AAATCAATTG TATAGGGGAT TCTAGTTTGT
GTACTATTGC CCCCAGTAAG GAACCCTCCA TTACAGATTC CTTATCAGTC ACTGGGAACG GTACTACTTC ATCTATGAGT
GTACAATCCA CCCCTGAAAT AGAAAAGAAG TTCGTTCATC ATGTATATGA TGCTATTGCT CCGCATTTCA GTGCCACTCG
GTTTGCCAAA TGGCCGAAGG TTGCATCATT TTTGTCATCT TTGCCTTTGG GGTCTCTTGT CCTTGATGCA GGATGTGGGA
ATGGGAAATA CCTAGGTTTG AATCAGGATT GTTTCTTCAT AGGATGTGAT ATAAGTCCTT CCTTGATTAA AATCTGCTCG
GATAGAGGGC ATGAAGTTTT GGTGGCAGAT GCTGTGAATC TTCCTTACAG AACTGGTTTT GGTGATGCAG CTATATCAAT
AGCAGTGTTA CATCACTTAA GCACTGAAAG TAGAAGGAGA AAAGCAATAG AAGAATTGGT CAGAGTTGTT AAAAAGGGTG
GCCATGTTCT GATTACAGTT TGGGCTGTAG AGCAAGAGGA TACAAATCTA ATTACCAAAT GGACTCCACT GACTGAGAAG
TATGTTGAAG AGTGGGTAGG ACCAGGGAGT CCTCGTGCTC GGACACCCTC ACCCTTGCCA TTAGAAAGCA TTCCTGAGAG
TGAGGAGAGT AGCACCGGTG AGAACATAAA AGTTTGCAGT GAGTCAAATG TATGTAAAGA TTTGGAGGAA GAAAAACATA
TAAAGAACCA ACAGGAATAC TTTGTTCCCT GGCATTTACC TTATCATCGT GCTGAAATCA GTGGTGCTTC TTCTCATGCT
CTTGCTGCTG GTCTGGCAAC TAAAGATGAC AAAAAGGGTG CTGTGGTGTA TAATCGATAT TATCATGTTT TTAGTGAAGG
AGAACTTGAA AGTTTGACAG CTGGAATAAT CAATGCTAGA ATCGTTGATC AGTTTTTTGA TAAATCCAAC TGGTGTATTA
TTCTCGAGAA AACAGCATAA CCTAGAAAGA AACCTGTTTG ATATGTCAAG GATCCTTGCG TGAGTATAGA AGGCCAGAGG
GTTGTATGAC AACTTTTACA AAATTTATCT TGCAGGTTAA CTTTGTCTGG TATTCAGCTT AATATGAATA AAAAACATGG
ACAGCTGCAA AACTTTGAAA GCATTATTCT CTGGCCATTA TCATCCAGAT CAGTCTGCAT TCTTCAAGAA AGCCTGAGTC
CTTATTTTAA TTTTTCTTTC TTTTTATTTG CAAAGCCCAT TTTTGGTTAT AACAATAGGG CATGAAGTAC GCATGGCCCC
TTTGTCAGCC CAAACATTGC TGAATATCTT TTATACAGGA GCATTTCTAC AACGTCGTTT ATTGGAAGTT TACACAGTTG
GATTTCACTA TTTTTGTCAT GATCTGTGCT TTCTGTTCCA GTTTTGAAGG AATTAAAACT CTTAAAGAGC TCAAATCTAG
CTCCTTTTAA ATATTCCTTG AGTATGGAAT GAGCAGAGAG GTGAGAAGGA TCTTTGGTTC CCAAGTAGGA TACAGTACAA
CCATTGTTGG ATCCTTACCT CTAAGAACAG TGTGCGAGCA ATTTAAAACA TGAACTTGTA TTTACATATT AAATTAAATG
TGGTAATCAC TGCAGGATAT TTGCATAGAC AGCCGCCAGG TTTTGTTCGG TCGTGAATTT GTGATTTTGT AATGCCGTTT
TTACTGCCAA ATATCAAATA AGCA

>Vigan.02G125400.01
ATGATTCATA GTGTTCTAAA AACAAGTAGA TTCTTCAATC CACGTAGAGA AGCCCTTGGT TTGACCAGTG TAATTGTTGA
TTTTGTTTGT CATTTAGCAT TTAGTTCAAT GAAACAAATC AATTGTATAG GGGATTCTAG TTTGTGTACT ATTGCCCCCA
GTAAGGAACC CTCCATTACA GATTCCTTAT CAGTCACTGG GAACGGTACT ACTTCATCTA TGAGTGTACA ATCCACCCCT
GAAATAGAAA AGAAGTTCGT TCATCATGTA TATGATGCTA TTGCTCCGCA TTTCAGTGCC ACTCGGTTTG CCAAATGGCC
GAAGGTTGCA TCATTTTTGT CATCTTTGCC TTTGGGGTCT CTTGTCCTTG ATGCAGGATG TGGGAATGGG AAATACCTAG
GTTTGAATCA GGATTGTTTC TTCATAGGAT GTGATATAAG TCCTTCCTTG ATTAAAATCT GCTCGGATAG AGGGCATGAA
GTTTTGGTGG CAGATGCTGT GAATCTTCCT TACAGAACTG GTTTTGGTGA TGCAGCTATA TCAATAGCAG TGTTACATCA
CTTAAGCACT GAAAGTAGAA GGAGAAAAGC AATAGAAGAA TTGGTCAGAG TTGTTAAAAA GGGTGGCCAT GTTCTGATTA
CAGTTTGGGC TGTAGAGCAA GAGGATACAA ATCTAATTAC CAAATGGACT CCACTGACTG AGAAGTATGT TGAAGAGTGG
GTAGGACCAG GGAGTCCTCG TGCTCGGACA CCCTCACCCT TGCCATTAGA AAGCATTCCT GAGAGTGAGG AGAGTAGCAC
CGGTGAGAAC ATAAAAGTTT GCAGTGAGTC AAATGTATGT AAAGATTTGG AGGAAGAAAA ACATATAAAG AACCAACAGG
AATACTTTGT TCCCTGGCAT TTACCTTATC ATCGTGCTGA AATCAGTGGT GCTTCTTCTC ATGCTCTTGC TGCTGGTCTG
GCAACTAAAG ATGACAAAAA GGGTGCTGTG GTGTATAATC GATATTATCA TGTTTTTAGT GAAGGAGAAC TTGAAAGTTT
GACAGCTGGA ATAATCAATG CTAGAATCGT TGATCAGTTT TTTGATAAAT CCAACTGGTG TATTATTCTC GAGAAAACAG
CATAA

>Vigan.02G125400.01
MIHSVLKTSR FFNPRREALG LTSVIVDFVC HLAFSSMKQI NCIGDSSLCT IAPSKEPSIT DSLSVTGNGT TSSMSVQSTP
EIEKKFVHHV YDAIAPHFSA TRFAKWPKVA SFLSSLPLGS LVLDAGCGNG KYLGLNQDCF FIGCDISPSL IKICSDRGHE
VLVADAVNLP YRTGFGDAAI SIAVLHHLST ESRRRKAIEE LVRVVKKGGH VLITVWAVEQ EDTNLITKWT PLTEKYVEEW
VGPGSPRART PSPLPLESIP ESEESSTGEN IKVCSESNVC KDLEEEKHIK NQQEYFVPWH LPYHRAEISG ASSHALAAGL
ATKDDKKGAV VYNRYYHVFS EGELESLTAG IINARIVDQF FDKSNWCIIL EKTA*