GBrowse Details

Vigan.02G109500.01

Basic Information:
Name: Vigan.02G109500.01
Multiple alignment
Variant Information
Position: Chr02:9092058..9098609 (+ strand)
Length: 6552
Functional Information:
Description: Similar to XIAP-associated factor 1-like isoform X2. [XP_004501054.1, Cicer arietinum]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.86,6.95,13.48,10.00,17.98,11.96,19.53,12.27
Automatic updates:
Name: NM_001251597 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306673 (LOC100306673), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:9092058..9092374 (+ strand)
Length: 317
Type: five_prime_UTR
Position: Chr02:9092375..9092418 (+ strand)
Length: 44
Type: CDS
Position: Chr02:9092785..9092920 (+ strand)
Length: 136
Type: CDS
Position: Chr02:9094505..9094642 (+ strand)
Length: 138
Type: CDS
Position: Chr02:9094730..9094851 (+ strand)
Length: 122
Type: CDS
Position: Chr02:9098066..9098225 (+ strand)
Length: 160
Type: CDS
Position: Chr02:9098226..9098609 (+ strand)
Length: 384
Type: three_prime_UTR

>Vigan.02G109500.01 class=Sequence position=Chr02:9092058..9098609 (+ strand)
ATGGCAGCTA CTTTCTCAGT CATCATCTAT TTTAATGGCC GATGGTTCCG AAAAGTCTCC CCAAATAAGA GTGGTTCAAC
AAGAGCAATT CTCCATTTTG TTTATTTTGC CCAAATTTTC CTTAATAATA ACCTAACCCT CTTCTTCCTT CCGCCCTATT
CTATATCTCT ACTTTTGTAA TCTCTCTCCC TCACATGTAT TTAATTTAAT TTGGTTTCTA TTTTTGTTTT CTTGTTTCTT
ATACTTATTA AATGTCTTTC CTTTTTAATT CCTTCGTTAA GATCTGGTCC TAGAACGAGG TTGCTTGTTT CGACGACATG
GCAGCGGTGT CCGATCAGAC CACTAGTATA TGCACTCACT GGTAAACACT TCCCTCCCAA TTTATGAATG GTGTACGATG
AAATGATCGA TTTTTTTAAT ATTTGTTAAA TTCGGGAACT AGGTTCAGTG ATTTACTCTC CTGACAGTTC TAAGCTTAAA
ATTGTGGATA ATCGGCCTTA TTTGTTTCGT GGGTAAAATG AATTTTACTC GTTGTTACTG GTATCGCATT TGACTCAGAA
CTGCTTCAAG GCGATGAAAA CCGGGATGAT GTGATTTTTT TTTTTTTTTT TTTGCCATTT AGGGTGATAC TTTGTTCATA
TTGAATTCCT AAATCACGTG TTTATGATTT AGCGTCAGGA GCTTTGATCA TGATTCTTTC TCGTCATGTT TTTCTTTCTT
TTCTTAGTGA TCGGGCTATC CCTTCTGCAA ATATTGATTT GCATTATGCT CATTGCTCTC GGAACCTTGA AAGATGCAAA
ATTTGTTGCG ATATGGTTCC GAAAACGCTT GCCGAGGAGC ACTATTTGAA CACACATGCC CCGGTATGGA AACTTTTGTC
TTGTTTTGTT TGATAAACAG ACTACTTGAG AAGTTCTGTA CTTGATGATA AAGAAAATTA GAGAATAAAT ACAAAATATT
ATGAGTTTAT TTTGAATATT TTTTAGGGTC TAAATTGATG TTTCAGTGAC AATTGGTTTG ACAATTTTAG TGGTGGAAAA
TGATATCATT CAATCAAACT CATCAAGTTA TGACAATAGA TATTATGAGT GGAATTGTTT AGATCTTTTG GATCAATAGT
GGTAATTGGT CTAACTAGGA TATATTAGAC GCAGGTTGAG TCAGTGAGAG AATTGCGTAA CTGAATCTTG AGATTGTCCC
ATGAGTCACT CGGTGCCTCT TGCTAGCTGT AATCATATGG CTGCAGATAT TTTGGACTAA TTGAATCTGC GAGCTCTGAA
AACTGAAACT CAATCAACAT TGTCAATCTT CTTGCTCTTG TTACCCCTTA TCTATCTCTA AAAGTTACCT TATAATGGGT
CCTCATGTTA GAATTTTATC ACTTGCGTCT TGTTTTCGTT ATATTTAGTT CATTTATATA TTCCGTCAGC TTTGTTTTTG
AAACCTGTTA TAAAAAAAAT GTTCAAATCA ATATAACAAA AAATTATTTA TAATTTAATT AAATAACTAC TTTATGATTT
CTGGTTTTCA AATTTACATA TTAATAAAAG TATAATTTAC ATATTGTAGC TTTGAGAAAA TAGTTTCCAT TTTCTTTTTC
CCTCAAATTT CTCCCATGCT TTCCAACTGA AAATGACAAC ATTGAACTGA ACATTGACTA AATATAAATT TGAAAAAACC
TAATAGAAAC ACAAGTCAAT TTAAATTTGA ACAAAAATGA TTACTCAACC GTCTCTGTAA TTTTTAAGTT ACAAATAGTA
ATTTTGTGTA TCCTGAATTG TTAAACAGGA GAACGGCAGA GTTATAATCC CATAGATATA TTGAAATTAG AAAACAAAAT
AATAGATGGA TTGGATATAC ATCAAATTTT ATGGATGGGT TGGAGTTGGT TTGATTGATA TCTTTCTTAG CATGGCTTTT
GATCATTGTT GCTTTAGTTC TTATATTTGG GACTTATGGA TGGAGTGTTG GTTCTATATT AATGGTGCTT TCATAAAAAA
AAGAAGATAA TGGTTCTTAA GAGGGAATAC ATATTGGATG GTGAGGGTTT ACTTTCTTAA AGGATTTTTC GTACTTTGAT
ATAGATATTA CTTAGTTAAG CAGCTCTTTC AATTTGATAT ACTCAGTTGG CTTTAATATT TTAGCAATCA CGAATGGAAA
GGGGAAGCAG TAACAGGTGC AATTTTTTTT GAACCAGTCC TAGTTTTACT ATGTCCAGTA TGTGATATGG AAGTGCCTGT
CATGTCATAG AGTGTGGAAA CTTGGAGTGT CAACTCCATA TGCTAAAGGA GGCTAGCTGG CTACATGGCC ATCGGTTCTT
TGCTGTGGCC CTCCCTTCCC CTTTTCCCAA AGGCTGCTTC TTAGCATATT AATAACAGAG TTCATGAAAT CAGATTTAAA
ATTCACTTTT GCTATGGTTA TTCAAAAGAA AATGGTAATT TGTGCAGGTT GCCTGTTCGC TGTGCAGTGA AACTATGGAA
CGTGATATTT TAGATATTCA TAGAGATGAA AATTGTCCTA GAAGGATGGT CACCTGTGAG TTCTGTGAGT TTCCCTTGCC
AGCCATTGAT CTGGTTGAGC ATCAGGTAGT GTTTGTAAAG GACTTTTTGT ATTTGAGAAG TTTACATCAA TCAATGTACT
CGGGTACTAA TTTCAGTTTG ATTTTTAAAC AGGAAGTATG CGGGAATCGA ACAGAACTTT GTCACCTTTG TAACAAGTAT
GTTAGACTGC GTGAAAGATA CAACCATGAA GATAGTTGCA ACAGAATTCA AGAGAATTCT TCAAGGCCTT CAAGGTAGGA
AATGCTATCA TTTGATTGCA TTATGCATTT CAATTAGATT ATTTTGTTCT TGAAACAGCT TCAATCCATA TCTTCAGAGT
TTTGGGAGGA AAAAAAATGT GTTTATTTTC CACAAAATAT AAAAAACAAT TATATTTTTT AGCAAGTGTT AGTTGTTAGT
TTTTGTTAGT GGGGGGAGTT GAACTCAACC TCTCCCACTC TCCCTTCCAA ACCCTTCAAA TCAACCTTAT ATAAAAAGCA
AAATGCATTT GCCAAAGATT ATTTCTTGAT GCAACTTATA GATGTCACGA GATTTTGGGA TGGATTTGTT TCTTAGAATT
TTTTCTCATC CTGTGCTAGT CTTGAATGCA TTTTTGTGCT CTCTTTCTAA GATGCTTGGT GCCTGTTAGC TGTAAACGGT
GTGACTTCCC TATAAGTAGC ACGAATATTT ATGGTTGCTT CATATATTTT TATAATTTTT TTTGTGCTGA ATTGTACATT
CTGCAGGAGA GTGGCAAAGA ACTGTTATTT AAAAAATATA TAACAATTAT TAGAATGTAG GTGGTATGAG AATCGTTGGC
AGATCGTACA TTAGGTGTAG ATGGTAAAAT AACAATTCAC ATACTGTTAA CCACAGGCAA GTTCCATGAA ATTTTGAACA
ATGAATTATC TTGAGCAGTA TCTCCTGTTT TTCTAAAGTT ATTTAATTGT TGAAGGTATT GTTTGGCTTA GTTTGTTTTT
GTTCCACTTA AAAGAAGTTC CTTCCAATTG TCTCTTATTG AAGCTCTTTT TCTGTGACTT GCTTCATAAA ACGGTTTTAA
GAGATGCCAT AAAGTGGCCC TTTTTCCTAG CTACATATGA CATCAACATG GAATTATTCT GATGTTTACA TTAAATCTTA
AGAGGACTGG TTCATTTTAT CTTGGAAGAC CAAACTGATG TCAAGAGTTT CTTCATAGCA CTTCAACGAT AGTTTAATCA
ATTTATATGT ATATATTTTT ATTTACAAAA AATGTCTTAA CTTATTAGGG TAAACCTAAC TGTCTCACAC CACACACTCA
CACAATAGCA CCCAAATGGT AAGAAAAGAA TGAAAATATG TATTCACATC AACCAATGTC ATGTACAACC AGTAACTGGG
AGCATAATCC CCCTCCACAG GATCAAGGTT CCTGTCTATA CAATTGATAT CAAAAACTCC CCTCTACCAG ACCCCCCCTT
GCCTTCTTAT AAAGGCAGCC CACTTCTAAC TACCCAACAA CAATTAATTC CTAAACTGAA CAATTAATTC TTCAACTGTT
TTCTCTCTCC TGCACACCTA TTACCCATTA TAACCTATCA TATTAAATCC TATCATTACA CCCTGCTGCA AAACAACCTT
GTCCTCAAGG TTGGTACAGT AATGCTTGTT CTCATGGCTC ATCTTCATCA TAGGAAGGGA ACCCACTGGC TGCTGCCTCC
AATTCAGGTC TGGAGGCCTG GGTGGTGGTC TATATGAAAG AATTGTTGAC TCCTTTAAGA GTTGCTTTTT TTCCAGAATT
CCCATGGACC CTATGATTCT TCTATATTGC CTTCTGACCT GGTGACCACT TACATGGGCC TGGATTTTAA CTCTTTTCTG
ATGAATGATC AAGAATTCTT TTCTCTTCTT CCACCCCCAA AACCTTTTTT GTATTTTTAT AGCAGCAGTA CTGGCGAAGC
CCTCTCCTTG CCCAAATTTG TTCATCCTAG AAGCTAAAAA GGAAAGAACT TGTTGATCTG ACCATCCAAT TCCTTAATCA
TCATCATGTT GAGCTAACTG TTTCCTCTGA ATGTTAAATT GCAGCCCTGC AAAGAAATAT CTCTGCCATT GGTCTTCTAG
TGTTTTATAT GTTTCTGACA ACCATATTTT TTCCCCACTC AAGACAGCTG CATCTTCTAC TTTATTTCCA GCCATCATAG
TCACCCTGTT CCCACCATAT TCTGCTTTCT TTCCTCTGTC TTCACCCTTC TTCACTGTTT TATCATACAC ATCACAACCT
ACCCCACTAT CTCTCCTAGA AACGGCAGCT TCTGCCACTT CCTGGGCAGC AACACAAACA ATGCCTCCAT CACAGTTTTT
GTCTTCTGCA CTGATATCTC TTTCTCTTTC CTTCCCAGAA AGAGCAGCTT TTGCCACTCC CTGGGTAGCA ACACCAACAA
CTTTCTCATC AGCAGCTTCA GTGATTTTTG CAGTTTGGCC TAACTTTTCA AAAACAAAAC CTCTATCTCT TTCTCCGAAC
CCCATTATCA ATGCCTCTTT CAGCCCTTTC CAAGAAAGGT TCTTGGTTTT ATTTTTCCAG GCCCTGAACC AATAAATTGT
GCCTCCCTCC ATGCAGCTGT AAGCCAACCT GAGCCTCTCC TTCTCTGTGA TATTTTGGGT GTCAAAAAAC TTCTCAACTT
GAGAGATCCA TCCCAACGGG TCCAACCCCT CAAACCTGGG CAATTCTACC CGCTGCCTCC AATTCTGCTG CCCTTTGCCC
CTGTCTTCCT CCAGCTCTTC CTCTGAACCA TCTTTCTTTC CTCTCATGAT AGCTTTCTCA CTTCTTTCTG AGCCCATTAT
GTGAATCTTG ATTTCCTGCA ACATTTCTTT TATTTCTTGG ATATCTCTCC TCCATTCTGC CATCCCCATT TTCTGTTCAC
TGACCCTTCT CTCCAAGGTA TTGTCTCTTC CTTCCATGCT TCCACCCTTT CTTGATCACT TCTTAATCCC TTCTTGATCC
GGCAGTCCCC TCCTAAGCGG AGCAGCTTCT TGATCCTTCA CCCCCACTTT GATCCGGCAT GTCGGACCAA ATTGTTAGGT
TTCTGGGTAT GAAACCTAAC TGTCTCACAG CACACACTCA CACAATAGCA TCCAAATGGT AAGAAAAGAA TGAAAATATG
TATTCACATC AACCAATGTC ATGTACAACC AGTAACTGGG AGCATAATCC CCCTCCACAG GATCAAGGTT CCTGTCTATA
CAATTGATAT CAAAAACTCC CCTCTACCAG ACCCTCCCTT GCCTTCTTAT AAAGGCAGTC CACTTCTAAC TACCCAACAA
CAATTAATTC CTAAACTGAA CAATTAATTC TTCAACTGTT TTCTCTCTCC TGCACACCTA TTATCCATTA TAACCTATCA
TATTAAATCC TATCATTAAC CCTGTTGGTC ATTATATGCA TTTGTTATTT TTCGTGATTG AATATTTACT TTTAATTTTC
TTGTGAAGGT ACGTGAGACC AGTTGAAAGA GACGAAGGTC CTCGAAGAAG GCCGCAGAAT GATTTCCCAA GAAAGCGTGT
TTTTTTCACA ATAGCAATCA CCGGTATTGC TGTTATTCTC GGGTCTATTT TTTTCCAGAG AAAGACAGAT CTCAGCAATT
TGCAATAACA GGGGAGAGAA TACGTGTTAC TGTAAATTTG CTTGATCTGT ATAATTTATT TGCATATAAC AGAAGCTCGA
ATGAGATAAT TATGGGATAT CCTTCACCTG CTGATAAAAC AGATTGTCAT TGTCATTGAA TTATTATTGT GGTATTCTAT
TTGATAGTGA AAACTGCCAA GTAGCAAGAG ATAAATGAGT CATTCGTTAC CAATATTGCT ATTTGTTTGT TATTCGTCTG
TTATCTGAGA ACTGCAATAT CGTTTCTGGA TAAAATTTGT GGATTTTTTG TTTGGTTTTG TGAGACATTT GGGATTTGTG
ATTCTGTGTG ACCACTCAAG TTACTTTTAA TAAATTTTAG CTAATATTAA GCAAATTTTG ATATATAATA AC

>Vigan.02G109500.01
ATGGCAGCTA CTTTCTCAGT CATCATCTAT TTTAATGGCC GATGGTTCCG AAAAGTCTCC CCAAATAAGA GTGGTTCAAC
AAGAGCAATT CTCCATTTTG TTTATTTTGC CCAAATTTTC CTTAATAATA ACCTAACCCT CTTCTTCCTT CCGCCCTATT
CTATATCTCT ACTTTTGTAA TCTCTCTCCC TCACATGTAT TTAATTTAAT TTGGTTTCTA TTTTTGTTTT CTTGTTTCTT
ATACTTATTA AATGTCTTTC CTTTTTAATT CCTTCGTTAA GATCTGGTCC TAGAACGAGG TTGCTTGTTT CGACGACATG
GCAGCGGTGT CCGATCAGAC CACTAGTATA TGCACTCACT GTGATCGGGC TATCCCTTCT GCAAATATTG ATTTGCATTA
TGCTCATTGC TCTCGGAACC TTGAAAGATG CAAAATTTGT TGCGATATGG TTCCGAAAAC GCTTGCCGAG GAGCACTATT
TGAACACACA TGCCCCGGTT GCCTGTTCGC TGTGCAGTGA AACTATGGAA CGTGATATTT TAGATATTCA TAGAGATGAA
AATTGTCCTA GAAGGATGGT CACCTGTGAG TTCTGTGAGT TTCCCTTGCC AGCCATTGAT CTGGTTGAGC ATCAGGAAGT
ATGCGGGAAT CGAACAGAAC TTTGTCACCT TTGTAACAAG TATGTTAGAC TGCGTGAAAG ATACAACCAT GAAGATAGTT
GCAACAGAAT TCAAGAGAAT TCTTCAAGGC CTTCAAGGTA CGTGAGACCA GTTGAAAGAG ACGAAGGTCC TCGAAGAAGG
CCGCAGAATG ATTTCCCAAG AAAGCGTGTT TTTTTCACAA TAGCAATCAC CGGTATTGCT GTTATTCTCG GGTCTATTTT
TTTCCAGAGA AAGACAGATC TCAGCAATTT GCAATAACAG GGGAGAGAAT ACGTGTTACT GTAAATTTGC TTGATCTGTA
TAATTTATTT GCATATAACA GAAGCTCGAA TGAGATAATT ATGGGATATC CTTCACCTGC TGATAAAACA GATTGTCATT
GTCATTGAAT TATTATTGTG GTATTCTATT TGATAGTGAA AACTGCCAAG TAGCAAGAGA TAAATGAGTC ATTCGTTACC
AATATTGCTA TTTGTTTGTT ATTCGTCTGT TATCTGAGAA CTGCAATATC GTTTCTGGAT AAAATTTGTG GATTTTTTGT
TTGGTTTTGT GAGACATTTG GGATTTGTGA TTCTGTGTGA CCACTCAAGT TACTTTTAAT AAATTTTAGC TAATATTAAG
CAAATTTTGA TATATAATAA C

>Vigan.02G109500.01
ATGGCAGCGG TGTCCGATCA GACCACTAGT ATATGCACTC ACTGTGATCG GGCTATCCCT TCTGCAAATA TTGATTTGCA
TTATGCTCAT TGCTCTCGGA ACCTTGAAAG ATGCAAAATT TGTTGCGATA TGGTTCCGAA AACGCTTGCC GAGGAGCACT
ATTTGAACAC ACATGCCCCG GTTGCCTGTT CGCTGTGCAG TGAAACTATG GAACGTGATA TTTTAGATAT TCATAGAGAT
GAAAATTGTC CTAGAAGGAT GGTCACCTGT GAGTTCTGTG AGTTTCCCTT GCCAGCCATT GATCTGGTTG AGCATCAGGA
AGTATGCGGG AATCGAACAG AACTTTGTCA CCTTTGTAAC AAGTATGTTA GACTGCGTGA AAGATACAAC CATGAAGATA
GTTGCAACAG AATTCAAGAG AATTCTTCAA GGCCTTCAAG GTACGTGAGA CCAGTTGAAA GAGACGAAGG TCCTCGAAGA
AGGCCGCAGA ATGATTTCCC AAGAAAGCGT GTTTTTTTCA CAATAGCAAT CACCGGTATT GCTGTTATTC TCGGGTCTAT
TTTTTTCCAG AGAAAGACAG ATCTCAGCAA TTTGCAATAA 

>Vigan.02G109500.01
MAAVSDQTTS ICTHCDRAIP SANIDLHYAH CSRNLERCKI CCDMVPKTLA EEHYLNTHAP VACSLCSETM ERDILDIHRD
ENCPRRMVTC EFCEFPLPAI DLVEHQEVCG NRTELCHLCN KYVRLRERYN HEDSCNRIQE NSSRPSRYVR PVERDEGPRR
RPQNDFPRKR VFFTIAITGI AVILGSIFFQ RKTDLSNLQ*