GBrowse Details

Vigan.02G035100.01

Basic Information:
Name: Vigan.02G035100.01
Multiple alignment
Variant Information
Position: Chr02:2623727..2625747 (- strand)
Length: 2021
Functional Information:
Description: Similar to Pterocarpan reductase. [U5U095, Phaseolus vulgaris]
InterPro: NmrA-like (IPR008030)
NAD(P)-binding domain (IPR016040)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.86,0.61,260.73,156.58,141.74,144.67,326.69,299.22
Automatic updates:
Name: MH450254 NCBI(nuccore)
Organism: Lupinus angustifolius
Description: Lupinus angustifolius isoflavone reductase (IRL2) mRNA, complete cds.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:2623727..2623958 (- strand)
Length: 232
Type: three_prime_UTR
Position: Chr02:2623959..2624125 (- strand)
Length: 167
Type: CDS
Position: Chr02:2624202..2624405 (- strand)
Length: 204
Type: CDS
Position: Chr02:2624498..2624741 (- strand)
Length: 244
Type: CDS
Position: Chr02:2625018..2625152 (- strand)
Length: 135
Type: CDS
Position: Chr02:2625266..2625448 (- strand)
Length: 183
Type: CDS
Position: Chr02:2625449..2625747 (- strand)
Length: 299
Type: five_prime_UTR

>Vigan.02G035100.01 class=Sequence position=Chr02:2623727..2625747 (- strand)
AAAATATTTT ATTTTACGGG GACCAGGTTG ATTTTTATTT TTGAAAAAAT AGTTATTTTT ATGAACTGAA AAATCATAAT
TTATATTTTA TTATGAAAAT GCTTGACTTT TTCATGGGTA GACCCCCAAA GCCGTGGAAA AAGTGATTTT TGGAAGTATG
ACTGTATTGG AAAGAGAAGG GTAACAAGGT AATTTTGGGG GTGTTGGTTT GCTATTAAAC AAGGGTGAGG GAGCACAAGG
CATACTGCAA AACAGAGTAG AAAGTAAAGG TGTAGAGTGA GCTTTAGAAG TGGTTGAAAA TGGCTGAGAA AAGCAAGATT
CTGATCATCG GAGGCACCGG CTACATCGGT AAACATATTG TGGAAGCAAG CGCAAAGGCT GGGCATCCAA CTTTTGCTCT
GGTGAGGGAA TCAACCGTCT CTGACCCCGC CAAGGCTGAG CTCATCAACC ATTTTAAGGC TTTGGGTGTT AATCTGGTCC
ATGTAAGACA TCATCTTTCA TTCTCCGTTT AACTTCACTA GTGTGCAGGT GGATGCTCAT GAAGAGCGAG TATAATATTT
GATTAATTAA CCACCGTTTG ATTTGACAAT GGCAGGGGGA TCTGTATGAT CATGAAACCT TGCTGAAAGC CGTAAAGCAG
GTAGATGTGG TCATTTCCAC CGTGGGTCAC TTGCAACTTG CCGATCAGGT CAAGATCATC GCTGCCATTA AGGAGGCTGG
CAACATTAAG GTTTTTTTCT CCTCACTCCA ATCCTCTAGA TCCTGTTTGT TTATTTGGAC TTTGATTCGA ATATACGTTC
TTGTAGAATT TCATCCTTAG CATATGAATC TTTCATGTTA TAATTAACAA ACTTTTAATA AGCGTATTGG GAAGATAAAA
CCAGAGTAGG AAAATATCTC GCTAATTTGT TTAACAAAAA TAGAATGAAT TACTGGTGAA TCATGTAGAG TAGTTTTGAA
GGTTAATTTT TGTTAACCGA GTGTGTTATG ATTTTTGAAT TGGCAGAGGT TTTTCCCTTC TGAATTCGGG AACGACGTGG
ATCGTGTGCA TGCAGTGGAG CCAGCAAAAT CTGCGTTCGA AGTCAAAGTC CAAATTCGGC GTGCCGTTGA AGCAGAAGGA
ATCCCCCATA CGTTCGTTGC CAGCAACTAC TTTGCCGGCT ACTTTCTGCC AACGTTAGCT CAACCAGGAG TCTTCGCTCC
ACCTCCACCT AAAGACAAAG TCATTATCTT CGGCGATGGA AATCCTAAAG GTAACTCATG TAAATAAATT CTAGTACGAC
CAGCACATAT CGAATGCCAT TAGTTGTTAA TTAACGTGTA CGTTTTTCTT GAACACTTGC AGCTATTTTC AACAAGGAAG
AGGACATTGG AACCTACACC ATCAGAGCCG TGGATGACCC TAGGACGTTG AACAAGATTC TCTACCTCAG GCCCGCTCAG
AACATTTACT CATTCAACGA GCTTGTGGCC TTGTGGGAGA AGAAGATTGG GAAGACCCTC GAAAAGGTTT ATGTGCCAGA
GGAGAAGCTT CTCAAGGACA TTGAAGGTAT GTTAAATATA AATGCGCAAA ATTTAAACCT TGATCTATGG TATTCATATA
CTGATATCCC CTTTTGTTGC AGAGTCTCCT ATTCCAATCA ATGTGATATT ATCAATCAAC CACTCTGTGT TCGTGAAGGG
TGACCACACC AACTTTGAGA TCGAGCCCTC TTTTGGGGTT GAGGCTTCTG AGTTGTACCC CGATGTCAAG TACACCACCG
TGGAAGAATT CCTTAGTCAG TTCGCTTGAG AATTAAAACA AGAAAGATGC ACTTAGTTGT TGATTTGGCC TCTGCTACTT
GTTGCTGCTA TTTTGCTTTG TAAAACTGTT GATTAATGTT TTACCATGTA TTATCCCCTG ATCTAAAAAG AGGGAAGAGA
GTGCAAGATT GGGTTGTATG TCAAATGCTT TTTCATACTT TTCAATAACT ACTTCAGTAG CTCAAAAATA ATAAATACTT
ACGACATGCA TGCGCTAACT A

>Vigan.02G035100.01
AAAATATTTT ATTTTACGGG GACCAGGTTG ATTTTTATTT TTGAAAAAAT AGTTATTTTT ATGAACTGAA AAATCATAAT
TTATATTTTA TTATGAAAAT GCTTGACTTT TTCATGGGTA GACCCCCAAA GCCGTGGAAA AAGTGATTTT TGGAAGTATG
ACTGTATTGG AAAGAGAAGG GTAACAAGGT AATTTTGGGG GTGTTGGTTT GCTATTAAAC AAGGGTGAGG GAGCACAAGG
CATACTGCAA AACAGAGTAG AAAGTAAAGG TGTAGAGTGA GCTTTAGAAG TGGTTGAAAA TGGCTGAGAA AAGCAAGATT
CTGATCATCG GAGGCACCGG CTACATCGGT AAACATATTG TGGAAGCAAG CGCAAAGGCT GGGCATCCAA CTTTTGCTCT
GGTGAGGGAA TCAACCGTCT CTGACCCCGC CAAGGCTGAG CTCATCAACC ATTTTAAGGC TTTGGGTGTT AATCTGGTCC
ATGGGGATCT GTATGATCAT GAAACCTTGC TGAAAGCCGT AAAGCAGGTA GATGTGGTCA TTTCCACCGT GGGTCACTTG
CAACTTGCCG ATCAGGTCAA GATCATCGCT GCCATTAAGG AGGCTGGCAA CATTAAGAGG TTTTTCCCTT CTGAATTCGG
GAACGACGTG GATCGTGTGC ATGCAGTGGA GCCAGCAAAA TCTGCGTTCG AAGTCAAAGT CCAAATTCGG CGTGCCGTTG
AAGCAGAAGG AATCCCCCAT ACGTTCGTTG CCAGCAACTA CTTTGCCGGC TACTTTCTGC CAACGTTAGC TCAACCAGGA
GTCTTCGCTC CACCTCCACC TAAAGACAAA GTCATTATCT TCGGCGATGG AAATCCTAAA GCTATTTTCA ACAAGGAAGA
GGACATTGGA ACCTACACCA TCAGAGCCGT GGATGACCCT AGGACGTTGA ACAAGATTCT CTACCTCAGG CCCGCTCAGA
ACATTTACTC ATTCAACGAG CTTGTGGCCT TGTGGGAGAA GAAGATTGGG AAGACCCTCG AAAAGGTTTA TGTGCCAGAG
GAGAAGCTTC TCAAGGACAT TGAAGAGTCT CCTATTCCAA TCAATGTGAT ATTATCAATC AACCACTCTG TGTTCGTGAA
GGGTGACCAC ACCAACTTTG AGATCGAGCC CTCTTTTGGG GTTGAGGCTT CTGAGTTGTA CCCCGATGTC AAGTACACCA
CCGTGGAAGA ATTCCTTAGT CAGTTCGCTT GAGAATTAAA ACAAGAAAGA TGCACTTAGT TGTTGATTTG GCCTCTGCTA
CTTGTTGCTG CTATTTTGCT TTGTAAAACT GTTGATTAAT GTTTTACCAT GTATTATCCC CTGATCTAAA AAGAGGGAAG
AGAGTGCAAG ATTGGGTTGT ATGTCAAATG CTTTTTCATA CTTTTCAATA ACTACTTCAG TAGCTCAAAA ATAATAAATA
CTTACGACAT GCATGCGCTA ACTA

>Vigan.02G035100.01
ATGGCTGAGA AAAGCAAGAT TCTGATCATC GGAGGCACCG GCTACATCGG TAAACATATT GTGGAAGCAA GCGCAAAGGC
TGGGCATCCA ACTTTTGCTC TGGTGAGGGA ATCAACCGTC TCTGACCCCG CCAAGGCTGA GCTCATCAAC CATTTTAAGG
CTTTGGGTGT TAATCTGGTC CATGGGGATC TGTATGATCA TGAAACCTTG CTGAAAGCCG TAAAGCAGGT AGATGTGGTC
ATTTCCACCG TGGGTCACTT GCAACTTGCC GATCAGGTCA AGATCATCGC TGCCATTAAG GAGGCTGGCA ACATTAAGAG
GTTTTTCCCT TCTGAATTCG GGAACGACGT GGATCGTGTG CATGCAGTGG AGCCAGCAAA ATCTGCGTTC GAAGTCAAAG
TCCAAATTCG GCGTGCCGTT GAAGCAGAAG GAATCCCCCA TACGTTCGTT GCCAGCAACT ACTTTGCCGG CTACTTTCTG
CCAACGTTAG CTCAACCAGG AGTCTTCGCT CCACCTCCAC CTAAAGACAA AGTCATTATC TTCGGCGATG GAAATCCTAA
AGCTATTTTC AACAAGGAAG AGGACATTGG AACCTACACC ATCAGAGCCG TGGATGACCC TAGGACGTTG AACAAGATTC
TCTACCTCAG GCCCGCTCAG AACATTTACT CATTCAACGA GCTTGTGGCC TTGTGGGAGA AGAAGATTGG GAAGACCCTC
GAAAAGGTTT ATGTGCCAGA GGAGAAGCTT CTCAAGGACA TTGAAGAGTC TCCTATTCCA ATCAATGTGA TATTATCAAT
CAACCACTCT GTGTTCGTGA AGGGTGACCA CACCAACTTT GAGATCGAGC CCTCTTTTGG GGTTGAGGCT TCTGAGTTGT
ACCCCGATGT CAAGTACACC ACCGTGGAAG AATTCCTTAG TCAGTTCGCT TGA

>Vigan.02G035100.01
MAEKSKILII GGTGYIGKHI VEASAKAGHP TFALVRESTV SDPAKAELIN HFKALGVNLV HGDLYDHETL LKAVKQVDVV
ISTVGHLQLA DQVKIIAAIK EAGNIKRFFP SEFGNDVDRV HAVEPAKSAF EVKVQIRRAV EAEGIPHTFV ASNYFAGYFL
PTLAQPGVFA PPPPKDKVII FGDGNPKAIF NKEEDIGTYT IRAVDDPRTL NKILYLRPAQ NIYSFNELVA LWEKKIGKTL
EKVYVPEEKL LKDIEESPIP INVILSINHS VFVKGDHTNF EIEPSFGVEA SELYPDVKYT TVEEFLSQFA *