GBrowse Details

Vigan.02G034600.01

Basic Information:
Name: Vigan.02G034600.01
Multiple alignment
Variant Information
Position: Chr02:2601247..2604583 (- strand)
Length: 3337
Functional Information:
Description: Similar to uncharacterized sugar kinase slr0537-like. [XP_004501001.1, Cicer arietinum]
InterPro: Carbohydrate kinase PfkB (IPR011611)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:7.82,17.94,16.70,19.17,16.86,15.55,12.34,12.92
Arabidopsis thaliana homolog: AT1G19600.1
Automatic updates:
Name: NM_001253229 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100816993 (LOC100816993), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:2601247..2601510 (- strand)
Length: 264
Type: three_prime_UTR
Position: Chr02:2601511..2601777 (- strand)
Length: 267
Type: CDS
Position: Chr02:2602150..2602261 (- strand)
Length: 112
Type: CDS
Position: Chr02:2602413..2602510 (- strand)
Length: 98
Type: CDS
Position: Chr02:2602877..2602984 (- strand)
Length: 108
Type: CDS
Position: Chr02:2603233..2603271 (- strand)
Length: 39
Type: CDS
Position: Chr02:2603371..2603442 (- strand)
Length: 72
Type: CDS
Position: Chr02:2603882..2604136 (- strand)
Length: 255
Type: CDS
Position: Chr02:2604217..2604390 (- strand)
Length: 174
Type: CDS
Position: Chr02:2604391..2604583 (- strand)
Length: 193
Type: five_prime_UTR

>Vigan.02G034600.01 class=Sequence position=Chr02:2601247..2604583 (- strand)
GTCAAATTAC ATCTTCTTGG GAGACTAGGC TAAGAGGGAA AGAGAAGGGT TTACACAGAG GGAAGAGAGA GAGAGCCCAA
TGACGCAAAT GTCACGGCGC GTTCATGCAA ATTCAGAAAT ATAGATCCAT AAAAACAAAC TACACTTACT CCCATACACG
CTTTTACAAT TAACACTTCT TACACAGTAA TCAATGGGTG CCGAGCCCTT TTCCCAATCC CAAATCCAAA ACCAAAACCA
TAATCACAAC TCCCGCCACG CGCCCTTGGT TCTCGGTCTC CAGCCCTTCG CCCTCGTCGA CAATGTTGCC ACCGTCGATT
GGTCCCTTCT CCGTCAAATT TCCGGCGAGC GCGGTGGCTC CGTTCCGGTT TGCTCGCTTT GTAATCCAAC TCAATTGTCT
CCAAGAACGC GGTTAACTAA ATTATTTTCC TATCCATGTC ATTGTAGGTT GGAATTGAAG AACTGAATGG CATACTGGGC
GAGGTTAAAA CCCACTCCCA CGACGCTCAT TCTCCCATGA AAACTCTCGC CGGTGGCAGC GTTGCCAACA CAATTCGCGG
GCTCAGTAGC GGTTTTGGAA TTTCAAGCGG AATTATTGGA GCCTACGGGG ACGATGAACA AGGCCAGCTT TTTGTTAATA
ACATGACCTC CAATGGCGTC GAGCTGTCAC GACTCCGCAA GAAGCAAGGA CACACGGCAC AGGTTTCCTA TTTCCTCACC
TCATACGTAC AAACTTCCCT TAGAGTGCTT ACTATTGTGT AGAGCAAATT ATACCAACAC TTCCCCAATT TCTTGGAAGG
AAAAACTTAC AAAAAAAATT GAATTTTTAC TTCACGGGGG ATCCGTTAAG ACAAACTTCA CGGATTACTG AGATACTATT
TCAATTTTGA TGGAAAAGTC ATACAAAAGT TCAGACAACA CTTGAAAGAT GCAATATCTA ATTTTTGTCT CTGTAATTAT
GCATAACTCT CTACTTTTTT AAAGAATACG TTTCAAAATA ATGTATTCAA ACAATTGATG AAACTAGTAT AATATTAGTA
TTGGTATGGA GTAATAAAGA AAGGGTATCC AAGGAATTTA AGGTAACCTC AAGATGTGAT TTACCCTACC ATAAAGCATA
ACAATGGGTT TTGTGTACCA GTGTGTTTGC TTGGTTGATG AGTCGGGCAA CCGTACAATG CGACCTTGTC TCTCAAATGC
TGTCAAAGTT CAGGTAATTC TAACACCCTT TCTGGATTCT TGGAGGGTAA ATTAGGATGT CTTTTATGAA GGTTTTTTGA
TTGATATATG CTCTCTTTTT CCTTTTTGCA AGGCTCAAGA GTTGATGAAA GAGGATTTCA TGGGATCCAA GGTTGGTTAC
TTTTCTTTGG TACCCTATTC TAGATATTTT TATATTTTAT TAATCATGTT TTTCTAATTG TCAATGTGTT AACTGGGATT
TATTTTATAT TAGATTTTAG GGGCTGAATC GCTTTTTCAT GTTAAATCCG ATTTATTTTA ACATGGCTTG CTCTTCTGTC
CGTTGTACTA CATCTATCAC TAATAATGTA TCACCTAGAG GATCTCTGTT GACTTGGTTT TTATATACTT ACGTTTCAGT
GGTTGGTGTT GAGATATGCA ATACTCAACT TGGAAGTTAT TCAAGCAGCA ATTCATTTAG CCAAACAGGA AGGCCTTCTT
ATTTCCTTGG ATTTGGCCAG TTTTGAGGTA TTTAAAAATT TCTCTTCCTT GAGCCTGGGA AGTTTGTGAT TAGAGTTTTC
ATTTCCAACA TATCAACTCA AAAAGGGCTG TTTTGATAAA ACCGAGTTTA TGAAGTGCTG CTAAGTCTTA TAACTCTTAG
CCGGTTAGTC CACAGAAATA ATTACTAAAC ATATTTGATT TGTTTTTGTT TGTTTTTGCT ATACGCACAA GACTTTGTAT
TCTTTTTTGC ATAATCTCAA ATATTAATGC ATGAAAGTGC TCATGATGAC TACCATTATG AATAGGAATA CGAAAGTTTA
GTTTTTAAGA AGTCTTCTGC TTAGTTTATT TAAATATTAT ATTTCTCACT CATGACCTCT TTATTTTGAC AAGATGGTCA
GGAACTTTAA ACTACCGCTT CTAAAGCTAC TGGAATCTGG GAATATAGAC CTTTGCTTTG CCAATGAGGA TGAAGCAGCT
GAGCTTTTAA GGTGGCTGTC GTTTGCATTT CACTCAGCAT TATTGAAAAT ATAATTTATC TTCAGTTTCT TAGTGAATGA
AGAAATTTTG TTCATTAATT ATGTATCATG TAATTTTGTC TTGTAAATAA GTGATATCAA TTTACTTTAC CACGGATTAC
AGGGGTGAAC AGAATGCTGA TTCTATAGCT GCTGTAGAAT TTCTTTCCAA ATACTGCCAA TGGGCTGTGG TGACATTGGG
CTCTAATGGG TGCATTGCTA AACATGGAAA GGAGGTATGC AAATTTTTTT TCTGTCATTC TGTGACATTT CCTGCTTGGC
TCCTTTCCCA ATTCTCTCTG TTTCCTCTCC CACCATGAAC CTTTTGTTAT TTGCCTCAAG ATGCCATAAT TAGCTAGACA
TTTGCGTAGT TTATTACTTT GTACGAATTT GTTATTGAAA GTTTTATATG TAAAAGAGGA TGGAGGTAAT GAAGGTGTAC
AAACTGTACA AACATTAAGC ACATTGTGGT TAAAAATATT AGGGATAAGT TCAGCAGCTT TTGCTTTCTT GTTGTTTGGT
CTTTGCGCCT GCTAGGGTTC TAGAATAGGT GTTGAAAAGT TAAAGACAAA TTATTAACTA CATAAACTAA GCCTTTTACA
TGTCAGATGA TACGAGTCCC AGCCATTGGG GAAACGAAGG CATGCGATGC TACAGGAGCA GGGGACCTTT TTGCAAGCGG
ATTTCTGTAT GGAGTGATCA AGGGTCTATC ACTAGAAGAA TGCTGCAAAG TAGGCGCGTG CAGTGGTGGA TCTGTTATCC
GGTCACTTGG TGGTGAAGTG ACATTAGAGA ATTGGCAATG GATGTACAAG CAGATGCAGA TCAAGGGTCT TCCCACGCCT
ACACAGATGC ATGCAAATGA ATATAGTGGC TAATTTTGCC CCCTTTATTC ATGTTGCCTT GGTTATATTA TACCAATTTT
TTCTTTTGCT CTTCTTTTTG CTGTCTTTTA TTATTCATTT ACTGACAATT CAAATGACAA CCACACGAGT TATGGAAGCT
ATATATTTTT CAGGAAAATT CAATCTGGTT TGAGTCTTCA ATGTACTTGA GCTGGGGGCA ATTATGAAAC TCTCTCCTAC
TCTAATATTA ACACTTTAAG ACATGGTTAA TTAACTTTCT GAGTTCTTAC TTCAAAC

>Vigan.02G034600.01
GTCAAATTAC ATCTTCTTGG GAGACTAGGC TAAGAGGGAA AGAGAAGGGT TTACACAGAG GGAAGAGAGA GAGAGCCCAA
TGACGCAAAT GTCACGGCGC GTTCATGCAA ATTCAGAAAT ATAGATCCAT AAAAACAAAC TACACTTACT CCCATACACG
CTTTTACAAT TAACACTTCT TACACAGTAA TCAATGGGTG CCGAGCCCTT TTCCCAATCC CAAATCCAAA ACCAAAACCA
TAATCACAAC TCCCGCCACG CGCCCTTGGT TCTCGGTCTC CAGCCCTTCG CCCTCGTCGA CAATGTTGCC ACCGTCGATT
GGTCCCTTCT CCGTCAAATT TCCGGCGAGC GCGGTGGCTC CGTTCCGGTT GGAATTGAAG AACTGAATGG CATACTGGGC
GAGGTTAAAA CCCACTCCCA CGACGCTCAT TCTCCCATGA AAACTCTCGC CGGTGGCAGC GTTGCCAACA CAATTCGCGG
GCTCAGTAGC GGTTTTGGAA TTTCAAGCGG AATTATTGGA GCCTACGGGG ACGATGAACA AGGCCAGCTT TTTGTTAATA
ACATGACCTC CAATGGCGTC GAGCTGTCAC GACTCCGCAA GAAGCAAGGA CACACGGCAC AGTGTGTTTG CTTGGTTGAT
GAGTCGGGCA ACCGTACAAT GCGACCTTGT CTCTCAAATG CTGTCAAAGT TCAGGCTCAA GAGTTGATGA AAGAGGATTT
CATGGGATCC AAGTGGTTGG TGTTGAGATA TGCAATACTC AACTTGGAAG TTATTCAAGC AGCAATTCAT TTAGCCAAAC
AGGAAGGCCT TCTTATTTCC TTGGATTTGG CCAGTTTTGA GATGGTCAGG AACTTTAAAC TACCGCTTCT AAAGCTACTG
GAATCTGGGA ATATAGACCT TTGCTTTGCC AATGAGGATG AAGCAGCTGA GCTTTTAAGG GGTGAACAGA ATGCTGATTC
TATAGCTGCT GTAGAATTTC TTTCCAAATA CTGCCAATGG GCTGTGGTGA CATTGGGCTC TAATGGGTGC ATTGCTAAAC
ATGGAAAGGA GATGATACGA GTCCCAGCCA TTGGGGAAAC GAAGGCATGC GATGCTACAG GAGCAGGGGA CCTTTTTGCA
AGCGGATTTC TGTATGGAGT GATCAAGGGT CTATCACTAG AAGAATGCTG CAAAGTAGGC GCGTGCAGTG GTGGATCTGT
TATCCGGTCA CTTGGTGGTG AAGTGACATT AGAGAATTGG CAATGGATGT ACAAGCAGAT GCAGATCAAG GGTCTTCCCA
CGCCTACACA GATGCATGCA AATGAATATA GTGGCTAATT TTGCCCCCTT TATTCATGTT GCCTTGGTTA TATTATACCA
ATTTTTTCTT TTGCTCTTCT TTTTGCTGTC TTTTATTATT CATTTACTGA CAATTCAAAT GACAACCACA CGAGTTATGG
AAGCTATATA TTTTTCAGGA AAATTCAATC TGGTTTGAGT CTTCAATGTA CTTGAGCTGG GGGCAATTAT GAAACTCTCT
CCTACTCTAA TATTAACACT TTAAGACATG GTTAATTAAC TTTCTGAGTT CTTACTTCAA AC

>Vigan.02G034600.01
ATGGGTGCCG AGCCCTTTTC CCAATCCCAA ATCCAAAACC AAAACCATAA TCACAACTCC CGCCACGCGC CCTTGGTTCT
CGGTCTCCAG CCCTTCGCCC TCGTCGACAA TGTTGCCACC GTCGATTGGT CCCTTCTCCG TCAAATTTCC GGCGAGCGCG
GTGGCTCCGT TCCGGTTGGA ATTGAAGAAC TGAATGGCAT ACTGGGCGAG GTTAAAACCC ACTCCCACGA CGCTCATTCT
CCCATGAAAA CTCTCGCCGG TGGCAGCGTT GCCAACACAA TTCGCGGGCT CAGTAGCGGT TTTGGAATTT CAAGCGGAAT
TATTGGAGCC TACGGGGACG ATGAACAAGG CCAGCTTTTT GTTAATAACA TGACCTCCAA TGGCGTCGAG CTGTCACGAC
TCCGCAAGAA GCAAGGACAC ACGGCACAGT GTGTTTGCTT GGTTGATGAG TCGGGCAACC GTACAATGCG ACCTTGTCTC
TCAAATGCTG TCAAAGTTCA GGCTCAAGAG TTGATGAAAG AGGATTTCAT GGGATCCAAG TGGTTGGTGT TGAGATATGC
AATACTCAAC TTGGAAGTTA TTCAAGCAGC AATTCATTTA GCCAAACAGG AAGGCCTTCT TATTTCCTTG GATTTGGCCA
GTTTTGAGAT GGTCAGGAAC TTTAAACTAC CGCTTCTAAA GCTACTGGAA TCTGGGAATA TAGACCTTTG CTTTGCCAAT
GAGGATGAAG CAGCTGAGCT TTTAAGGGGT GAACAGAATG CTGATTCTAT AGCTGCTGTA GAATTTCTTT CCAAATACTG
CCAATGGGCT GTGGTGACAT TGGGCTCTAA TGGGTGCATT GCTAAACATG GAAAGGAGAT GATACGAGTC CCAGCCATTG
GGGAAACGAA GGCATGCGAT GCTACAGGAG CAGGGGACCT TTTTGCAAGC GGATTTCTGT ATGGAGTGAT CAAGGGTCTA
TCACTAGAAG AATGCTGCAA AGTAGGCGCG TGCAGTGGTG GATCTGTTAT CCGGTCACTT GGTGGTGAAG TGACATTAGA
GAATTGGCAA TGGATGTACA AGCAGATGCA GATCAAGGGT CTTCCCACGC CTACACAGAT GCATGCAAAT GAATATAGTG
GCTAA

>Vigan.02G034600.01
MGAEPFSQSQ IQNQNHNHNS RHAPLVLGLQ PFALVDNVAT VDWSLLRQIS GERGGSVPVG IEELNGILGE VKTHSHDAHS
PMKTLAGGSV ANTIRGLSSG FGISSGIIGA YGDDEQGQLF VNNMTSNGVE LSRLRKKQGH TAQCVCLVDE SGNRTMRPCL
SNAVKVQAQE LMKEDFMGSK WLVLRYAILN LEVIQAAIHL AKQEGLLISL DLASFEMVRN FKLPLLKLLE SGNIDLCFAN
EDEAAELLRG EQNADSIAAV EFLSKYCQWA VVTLGSNGCI AKHGKEMIRV PAIGETKACD ATGAGDLFAS GFLYGVIKGL
SLEECCKVGA CSGGSVIRSL GGEVTLENWQ WMYKQMQIKG LPTPTQMHAN EYSG*