GBrowse Details

Vigan.02G024700.01

Basic Information:
Name: Vigan.02G024700.01
Multiple alignment
Variant Information
Position: Chr02:1786417..1791868 (- strand)
Length: 5452
Functional Information:
Description: Similar to Uncharacterized protein. [I1K7G7, Glycine max]
GO: Biological Process: intracellular signal transduction (GO:0035556)
InterPro: Protein kinase C-like, phorbol ester/diacylglycerol binding (IPR002219)
Thioredoxin-like fold (IPR012336)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:1191.88,355.72,11.85,6.46,0.05,11.34 ,0.56,5.99
Automatic updates:
Name: NM_001289342 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max thioredoxin-like superfamily protein (LOC100815038), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:1786417..1786732 (- strand)
Length: 316
Type: three_prime_UTR
Position: Chr02:1786733..1787365 (- strand)
Length: 633
Type: CDS
Position: Chr02:1787936..1788436 (- strand)
Length: 501
Type: CDS
Position: Chr02:1791344..1791466 (- strand)
Length: 123
Type: CDS
Position: Chr02:1791467..1791868 (- strand)
Length: 402
Type: five_prime_UTR

>Vigan.02G024700.01 class=Sequence position=Chr02:1786417..1791868 (- strand)
ACACGGACCT TCCATATCAC GGTGGCCAGA AGATACAGCA ACTAATAATA ACCCATTCGA AAATCACCAC CATACACGTG
GCCTTTATGT TATCCCTTCG CTGACTCCAC TGCACATGGA TGACATCGCG CAATCAAAAA GGCTGCACCA TCATTCCCCA
TGTGTGTGCG GTGTAGGCTG GTATTATCCC GGGGCGCAGA TGAATGCTAC GTGTGAAGGT TTTGGTGTGT GATTTGTGGA
TGCATAGGAT GTAATGATGT GGAAAGAATA TGATTCTATT TCTAATGAAT ATAAGTGTCG AGTGTATGAG AACGCTCGTA
CTCTCCTCCC GGTGCTTTCA TCTCTAGATT GTTACACAGT ACAAAACAAA GAAAAAGAAA AAGAAAAAAG AGAGAGAAAG
TGATGAGAGC GGTGATGAAG GATGAAACTC AAGCTGTGGT GAATGATAAT TCTCACAACG GCAAATTCTC ACATCTCCTT
GCTTCCCAAG ATCGTGATTA TCTTCTTTCT CCAACTGGGG CTCAGGTTCT CTATCTCTCT CATAATCACT TGTTTGTCAG
AGTTAATTAT TCAGAGACTT ATTCGAGTAA TATAGCTGAA GATAAATAGC ATATTCTTTG TATAAAGGAA AAAAAAAATA
GTATAGAGAA TGCTCCTAGC TCACTTTTGG CTGAGATGGT GGTCACTGGT CAGTTTTCGT CTTTTACAAA TTGTCTTGAT
CTTGATATGA TTTAACATCT GTGTGCTTTA TACGCTTCCA CAGACTTGCT ATCATGGCCC TCCAACTTTG GTACTTAGCC
GCGGAAAATA TCAAGATTTC ATTAGAAATT TAAGGATAAT AATAACGAGA AAATAATTTG TGGTAATATA TGATTATGTA
AATCCTACTT TCTCTACTTC TCTTTCAGTT TCCTTTATTT CAAGCTCTTC GCTGTGGCGT CTGGTGGCAA GGATTTAGTC
TTGCAATGTT TTCTGGAATT GCTTAATTTA AATAATTAAA ACATGTTTGG TGGGTTGCTG CCGCAGATGC TGGTGGCGGG
TGAGCGTAGT GTTTTTGTTC AACCGTTTAG TAAAAAGAAA ATGTGTTTTT AGTTACGCTT ATTATATCTG TAAAAAATTC
TCCATTCATG TGTTTTAAAA GAATTGTTAA GCATGCTCAG TGAACACCCA CCCAGCATAT ATGTGTCGGT TGTTTTCTTG
TAGAGTTTTG TACAGGTAAC CAAGATTTCT GGATTTATCT ATGTTTATCT GTTATATATC ATAACTAAGA ATATTTGCAA
CCCCAAAAAT ATGAAGGGAT TGGACCTAGT TGTCGCAGTG CTAATCTTCC TCCACAGAAA TCATGTTCTA GGGTTTAAAA
ACAATTATCA TATTAGTCTT ATTTAAAGGA TGCAACTTCT CAAACTGAAA AAACTAGCTC TGGTTAGTTA TGATCTCTCT
GTTTAGCTGT AAACTTGCAT GCAGAATATG TTCATATATG TTTTTTCTTC TTTAAATATG AATCTGATGG GTAAATCCAC
TTATTACTAC TTGAGAACCA TTAAGGGGAT GTAAGAACCC GACCCGTCGG AGTCCTTTAC CCGCCTAAAT AAACGGGTAA
GAATAAGCTG AGAGAAGAAA GTCCTTTTGT GCTGTCTCTA CTTGCTTTGA ACAGTGCCGT AGTGGTCAAA TCCTTACTCT
TTTAAGTTCA TGAAACCATC CCCAACAAAC TAAGCTTACG ATTCCACTGA GTTATAGCAT CTTTATAAGT GATATACTCT
ACGAAAGAGA GAATGGATTA TGTGTAAAAA GGGTATTTTT TACACGAAGT GCAAAAGAAA TTGAGATATG AAGCCAATTT
TTTACTCAAC TCTTCTTTAA TCGTAAAGTA AAGGCACCGT CAATGGAGCG TTGTACATAA TTATAAGTGG GTCATAAAAA
ACGGTTGCTT GAGTAAACTA CTGTTGCTTT ACTATAGTCA ATTGGTTAAA AAACTGTTGT TTAAATTTTA AGGTTGACTG
TCTTTGAAGT TGCTCAACTA AGAAATCGGA CGAAAATGCT TCTTTAGACT AAAAGTTAAC TTTGTAAAAA GACAAAGAAG
TTGAAGGATA AAATGATAAA TATAAGACAT GTTTAGAAGT TTATTGAGAG TAAAATTGAT ATTACTCAAT CAGACTATGG
AAAGATAATT CTTTTCATTC GCTTTTTGTA GAAAGGTGGG ACATGGAATT ATTTAAGAGT GATTGTTGAA CCCAAATTTG
GTTATTTTAA GAGTGGGAAA TGGAATTAAA AATGAATGGT GATGATATTC TTGTTGGCTA CGGAGTTGTT CGATTAGTTG
GATCATAGAT GAAAAGCATT CACGAGGTAC ACATGTCCAA TATTTGTAGT CCTTATCAGT GTGTGATGGA GGACCAAGGA
TTGAATCGAA GGACATGTGT CAGCTAAACA TTTCCTGTAG CGTTGTCAAG CTATTAGGCT TTGCGTTATA CACGTGGCCC
ATTACCCCCT ACAAAATAAA ACACTGGGCC ATTTCGGTGG CCCGTCTCTT TAACATTTCG GATAGCAATG GATTCTCTTT
CTGTTGTTAT GTACCCTTGC TTTTATATAT CATCGTGTAC TCGGTACTCC TTTGTCGGTG TTTCATTTCA ACTTGCTTTC
GTATAAATCT CTGAATTCTT ATTAAGATAA AGTGTCGCAT TTATGTTTTC ATAAAAACAT GTCAATTAAT TGCGAACTTT
ACAGAGTATA ATAGATGGTA CATTGAGGAA TGTGTTAAGA AAAATGCGTT CTTATCCTTT CCCTTGTAAG ATATTATATA
TATATATATA TATATATATA TATATATATA TATATATATA TATATATTCA TTTATCTTCG TTTCCCATTT CCCCATAGTA
AATTGACACC TCGCAGACCA GACACATGGT CATCGCTGGA AGGTAGCCGT ACGTTGTCCG GCATGGTCTT AGACTATGTT
ATGCAAGCGA CACGTACGAA CACGTATCCA CGTGATGCGT TGTTTCTTTC TTTAGAATTT TCGTGCAAGC TTTTTCTCGT
CATGTTAAAC TGAAGTTCTT CAAAACTATA ATTCTTTCAT GGAAAAGATA TTTTTTTCTG CTAATATTCC TCTTGAGAGA
TAAAATTTAC TTGAGATATG ATCGTTATAG GCGTCAAATT CGATAACTTC AATTACTCCA CTTGGTCGTA GCTTATTTTG
GATCCATATT TGAGATTATT CAAGTCTATA TATTCGTATA TTTAAATAAA TATACGATCT ATTATATATT AGTGTCTGTT
ATATTTTTTA AATATTTTTA ACGTAAATAT AAAATAACCT ATTACGTTAG ATAATTTCTT TAACAAAATT AAGTGAAAAG
ATGAAGCTCT TACATATTGA AAGTCGCTGT TTGGTTAAGT TGAGGTTGTT GGAAACGGTG CATCTTACGC AGGTGAAGGT
CAGTGATCTT GAAGGGAAAG TAGTGGGGCT ATTATTTGGT GCGAATTGGT ACCCACCATG CCGCGTATTC ACCCAAGCCC
TAGTTGGAAT CTACGAGGAG TTGAAAAGCC GTTTCCCTCA GTTTGAGATT GTGTATGTGT CCTCTGACGA AGACTTGGAT
GCTTTCAGTA GCTTCTACGG AAACATGCCA TGGCTAGCGA TACCGTTCTC TGATTTGGAA ACGAAGAAAT GGTTGACCAG
AAAGTATGAG GTGGAAGCCA TTCCGTGCTT GATTTTGTTG CAACCAGAGG ATAGTAAAGA TGAGGGAACA GTTCGCGACG
GGGTTGAACT TATTTACCGT TACGGAGCCG AAGCTTACCC GTTCTGTAAC GAGAGGTTGG AGCAGCTGCG AAAGGAAGAC
AAAGTGAAGC GTGAAAACCA GACCCTCCTT AATTTGCTGT CAAACCAGCA TAGAGACTAT GTTCTGAGTC ACACTCACTC
TGGCCTTAAA CAGGTAATTA ACACTCTCTA CCACCGACAC CTTGCATGCA TGCCACTGTT TTCCACTTTT TGTACTTCAT
CTCCTTAATC GTAATGTTAA AGTTGAATTT CAATATTAAT TCAAGATGGT TGCAAAGAAA CTTGAAATAA TTATGTAACA
TAATTTAAAG TCTAAATACA ATTTATATAT TGTAATATAG TGTTCACGAC TTTTAATTGT AATATATATT TTTTGTAGAA
AATTTGTTTT AATCGATTTT AATTGTATGA AAATTAATAT TTATCAATGT ATTATACACG TTAAAGTAAT AATTAAAGTA
ACTCTACGAT ATTAATTCTC GTATTGCAAA TTTTTTGCAA CATAGTAGGA GCAAAAAGTT GTATTTTTTA TGTTTGTCAT
AAAACCTTTT CTCTGACTTT ATCAAATAAT AACTTAGTTT AATATAGTTA TAGAAAAAAA TGTTGGTAGA ATCCATGAAT
GGGAATAGAG TTTGTGTTGC ACGTGGACGA AGTTTTGTTG TTTGAAGTGC ATGCAGAGAA TCCTGTTTCT GTTCCGCGTG
ACGGGTGTTG CTTCTGTAAA CAGGTACCTG TCGCTTCTCT AGTGGGTAAA ACAATTGCAC TCTACTTCTC CGCCGAGTGG
TGCGTGCCAT GCGCCAAGTT CACTCCCAAA ATGATTTCCG TTTACGAGAA GATTAAGCAG GAGCTAGCGG AGAAGGGAGA
GGAAGACTTC GAAGTTGTGC TGGTATCCAG CGACCGTGAC AAAGCATCCT TTGAGTCACA CTACAGCAGC ATGCCTTGGT
TAGCTTTGCC TTTCGGTGAT TCCGAGATGA AGAACCTCGT TCGACACTTC AACGTGCAAG GGATTCCATG GTTGGTGATC
GTAGGTCCTG ATGGTAAAAC AATAACAGTG CATGGTAGGA GCTTGATAAA CTTGTACCAA GAGAACGCGT ACCCTTTCAC
GAACGCCAAA GTGGAGGAAC TGGAAAAGAA GCTTGAGGAA GAGGCGAAGG ATCTTCCGGC TCTGGTTTAT CACGAAGGTC
ATCGGCATGA CCTGAATTTG GTGTCTGATG GGAACGGTGG AGGACCCTTT ATCTGCTGTG TGTGCGATGA ACAAGGGTCT
AGTTGGGCCT ACCAGTGTCT CCAATGTGGT TATGAAGTGC ACCCCAAATG CGTCAGAACA GTCGACCGTC AGAACAGTGT
GTTAATAACT AATTAACTTC CTGTTCCAAT TAATTCAATG TTCTTGTTTG TGGCCAAGAG GGTGAAAACT TATATATATA
TATAAACACA GATATAAATA TATAGCTCTA TGGGTGCTTT TCTTCTTGTT GGGAATATAT GTGGCTGAAA GAAAATGACA
ATATTGATAA AAGATAAAGG AGATACTACC ATCGAGAATG AGTGGAAACG GACGTGATCT GAATTTAGGT TTGAAGTTTG
ATTTTCTGTC GGAAAAATGG CCATTCCTTG TTCTTAAAAG ATCAAGACGT CATCAACTAT TGTTATTCAT AGCATTAGAA
GGTGCTGTTA CG

>Vigan.02G024700.01
ACACGGACCT TCCATATCAC GGTGGCCAGA AGATACAGCA ACTAATAATA ACCCATTCGA AAATCACCAC CATACACGTG
GCCTTTATGT TATCCCTTCG CTGACTCCAC TGCACATGGA TGACATCGCG CAATCAAAAA GGCTGCACCA TCATTCCCCA
TGTGTGTGCG GTGTAGGCTG GTATTATCCC GGGGCGCAGA TGAATGCTAC GTGTGAAGGT TTTGGTGTGT GATTTGTGGA
TGCATAGGAT GTAATGATGT GGAAAGAATA TGATTCTATT TCTAATGAAT ATAAGTGTCG AGTGTATGAG AACGCTCGTA
CTCTCCTCCC GGTGCTTTCA TCTCTAGATT GTTACACAGT ACAAAACAAA GAAAAAGAAA AAGAAAAAAG AGAGAGAAAG
TGATGAGAGC GGTGATGAAG GATGAAACTC AAGCTGTGGT GAATGATAAT TCTCACAACG GCAAATTCTC ACATCTCCTT
GCTTCCCAAG ATCGTGATTA TCTTCTTTCT CCAACTGGGG CTCAGGTGAA GGTCAGTGAT CTTGAAGGGA AAGTAGTGGG
GCTATTATTT GGTGCGAATT GGTACCCACC ATGCCGCGTA TTCACCCAAG CCCTAGTTGG AATCTACGAG GAGTTGAAAA
GCCGTTTCCC TCAGTTTGAG ATTGTGTATG TGTCCTCTGA CGAAGACTTG GATGCTTTCA GTAGCTTCTA CGGAAACATG
CCATGGCTAG CGATACCGTT CTCTGATTTG GAAACGAAGA AATGGTTGAC CAGAAAGTAT GAGGTGGAAG CCATTCCGTG
CTTGATTTTG TTGCAACCAG AGGATAGTAA AGATGAGGGA ACAGTTCGCG ACGGGGTTGA ACTTATTTAC CGTTACGGAG
CCGAAGCTTA CCCGTTCTGT AACGAGAGGT TGGAGCAGCT GCGAAAGGAA GACAAAGTGA AGCGTGAAAA CCAGACCCTC
CTTAATTTGC TGTCAAACCA GCATAGAGAC TATGTTCTGA GTCACACTCA CTCTGGCCTT AAACAGGTAC CTGTCGCTTC
TCTAGTGGGT AAAACAATTG CACTCTACTT CTCCGCCGAG TGGTGCGTGC CATGCGCCAA GTTCACTCCC AAAATGATTT
CCGTTTACGA GAAGATTAAG CAGGAGCTAG CGGAGAAGGG AGAGGAAGAC TTCGAAGTTG TGCTGGTATC CAGCGACCGT
GACAAAGCAT CCTTTGAGTC ACACTACAGC AGCATGCCTT GGTTAGCTTT GCCTTTCGGT GATTCCGAGA TGAAGAACCT
CGTTCGACAC TTCAACGTGC AAGGGATTCC ATGGTTGGTG ATCGTAGGTC CTGATGGTAA AACAATAACA GTGCATGGTA
GGAGCTTGAT AAACTTGTAC CAAGAGAACG CGTACCCTTT CACGAACGCC AAAGTGGAGG AACTGGAAAA GAAGCTTGAG
GAAGAGGCGA AGGATCTTCC GGCTCTGGTT TATCACGAAG GTCATCGGCA TGACCTGAAT TTGGTGTCTG ATGGGAACGG
TGGAGGACCC TTTATCTGCT GTGTGTGCGA TGAACAAGGG TCTAGTTGGG CCTACCAGTG TCTCCAATGT GGTTATGAAG
TGCACCCCAA ATGCGTCAGA ACAGTCGACC GTCAGAACAG TGTGTTAATA ACTAATTAAC TTCCTGTTCC AATTAATTCA
ATGTTCTTGT TTGTGGCCAA GAGGGTGAAA ACTTATATAT ATATATAAAC ACAGATATAA ATATATAGCT CTATGGGTGC
TTTTCTTCTT GTTGGGAATA TATGTGGCTG AAAGAAAATG ACAATATTGA TAAAAGATAA AGGAGATACT ACCATCGAGA
ATGAGTGGAA ACGGACGTGA TCTGAATTTA GGTTTGAAGT TTGATTTTCT GTCGGAAAAA TGGCCATTCC TTGTTCTTAA
AAGATCAAGA CGTCATCAAC TATTGTTATT CATAGCATTA GAAGGTGCTG TTACG

>Vigan.02G024700.01
ATGAGAGCGG TGATGAAGGA TGAAACTCAA GCTGTGGTGA ATGATAATTC TCACAACGGC AAATTCTCAC ATCTCCTTGC
TTCCCAAGAT CGTGATTATC TTCTTTCTCC AACTGGGGCT CAGGTGAAGG TCAGTGATCT TGAAGGGAAA GTAGTGGGGC
TATTATTTGG TGCGAATTGG TACCCACCAT GCCGCGTATT CACCCAAGCC CTAGTTGGAA TCTACGAGGA GTTGAAAAGC
CGTTTCCCTC AGTTTGAGAT TGTGTATGTG TCCTCTGACG AAGACTTGGA TGCTTTCAGT AGCTTCTACG GAAACATGCC
ATGGCTAGCG ATACCGTTCT CTGATTTGGA AACGAAGAAA TGGTTGACCA GAAAGTATGA GGTGGAAGCC ATTCCGTGCT
TGATTTTGTT GCAACCAGAG GATAGTAAAG ATGAGGGAAC AGTTCGCGAC GGGGTTGAAC TTATTTACCG TTACGGAGCC
GAAGCTTACC CGTTCTGTAA CGAGAGGTTG GAGCAGCTGC GAAAGGAAGA CAAAGTGAAG CGTGAAAACC AGACCCTCCT
TAATTTGCTG TCAAACCAGC ATAGAGACTA TGTTCTGAGT CACACTCACT CTGGCCTTAA ACAGGTACCT GTCGCTTCTC
TAGTGGGTAA AACAATTGCA CTCTACTTCT CCGCCGAGTG GTGCGTGCCA TGCGCCAAGT TCACTCCCAA AATGATTTCC
GTTTACGAGA AGATTAAGCA GGAGCTAGCG GAGAAGGGAG AGGAAGACTT CGAAGTTGTG CTGGTATCCA GCGACCGTGA
CAAAGCATCC TTTGAGTCAC ACTACAGCAG CATGCCTTGG TTAGCTTTGC CTTTCGGTGA TTCCGAGATG AAGAACCTCG
TTCGACACTT CAACGTGCAA GGGATTCCAT GGTTGGTGAT CGTAGGTCCT GATGGTAAAA CAATAACAGT GCATGGTAGG
AGCTTGATAA ACTTGTACCA AGAGAACGCG TACCCTTTCA CGAACGCCAA AGTGGAGGAA CTGGAAAAGA AGCTTGAGGA
AGAGGCGAAG GATCTTCCGG CTCTGGTTTA TCACGAAGGT CATCGGCATG ACCTGAATTT GGTGTCTGAT GGGAACGGTG
GAGGACCCTT TATCTGCTGT GTGTGCGATG AACAAGGGTC TAGTTGGGCC TACCAGTGTC TCCAATGTGG TTATGAAGTG
CACCCCAAAT GCGTCAGAAC AGTCGACCGT CAGAACAGTG TGTTAATAAC TAATTAA

>Vigan.02G024700.01
MRAVMKDETQ AVVNDNSHNG KFSHLLASQD RDYLLSPTGA QVKVSDLEGK VVGLLFGANW YPPCRVFTQA LVGIYEELKS
RFPQFEIVYV SSDEDLDAFS SFYGNMPWLA IPFSDLETKK WLTRKYEVEA IPCLILLQPE DSKDEGTVRD GVELIYRYGA
EAYPFCNERL EQLRKEDKVK RENQTLLNLL SNQHRDYVLS HTHSGLKQVP VASLVGKTIA LYFSAEWCVP CAKFTPKMIS
VYEKIKQELA EKGEEDFEVV LVSSDRDKAS FESHYSSMPW LALPFGDSEM KNLVRHFNVQ GIPWLVIVGP DGKTITVHGR
SLINLYQENA YPFTNAKVEE LEKKLEEEAK DLPALVYHEG HRHDLNLVSD GNGGGPFICC VCDEQGSSWA YQCLQCGYEV
HPKCVRTVDR QNSVLITN*