GBrowse Details

Vigan.02G014400.01

Basic Information:
Name: Vigan.02G014400.01
Multiple alignment
Variant Information
Position: Chr02:1001224..1005577 (+ strand)
Length: 4354
Functional Information:
Description: Similar to Uncharacterized protein. [I1JSG1, Glycine max]
GO: Biological Process: nucleoside metabolic process (GO:0009116)
Molecular Function: catalytic activity (GO:0003824)
InterPro: Nucleoside phosphorylase domain (IPR000845)
Nucleoside phosphorylase (IPR018017)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:14.54,6.21,51.30,37.81,47.11,38.26,55.53,31.93
Arabidopsis thaliana homolog: AT4G38800.1
Structure :
Position: Chr02:1001224..1001273 (+ strand)
Length: 50
Type: five_prime_UTR
Position: Chr02:1001274..1001376 (+ strand)
Length: 103
Type: CDS
Position: Chr02:1001465..1001528 (+ strand)
Length: 64
Type: CDS
Position: Chr02:1001846..1001937 (+ strand)
Length: 92
Type: CDS
Position: Chr02:1002248..1002354 (+ strand)
Length: 107
Type: CDS
Position: Chr02:1003071..1003145 (+ strand)
Length: 75
Type: CDS
Position: Chr02:1003748..1003822 (+ strand)
Length: 75
Type: CDS
Position: Chr02:1004722..1004814 (+ strand)
Length: 93
Type: CDS
Position: Chr02:1005018..1005215 (+ strand)
Length: 198
Type: CDS
Position: Chr02:1005216..1005577 (+ strand)
Length: 362
Type: three_prime_UTR

>Vigan.02G014400.01 class=Sequence position=Chr02:1001224..1005577 (+ strand)
CCGAGATAGA GAAAGAAGAG AAAAGTAGTA CGAATCTGCA ACAAATAGTC ATGGCTGCGC TTGGGGACCA ATCAGAAGCT
CCTCCTCCTC CTCCTGACCA GCAAGCCATG GCTTCCCAGA ACAAACCCAT TTCTAACATC GTCATCATCA TTGGTACTCT
ACGATCTTAT GTTATGTTAT CTTCCATTTT CTCTTGTATT TGATCGTCCT ATTGTTAAAT GTTGTATCAA ATGAATAACA
GCTATGCAGA CGGAGGCACT TCCCATCGTC AACAGGTTCC AGCTCACCGA GGAACCTAAT TCTCCGTATG TATCTCTCTT
TCTCTCTTTT ATTTTCTTAG GTTTTAAGAC TACTTATTCC AATTAGTTAA TCACCCCCCT CCCCCCCCTT TTTTTTTGTT
TACTTTGGCT AACCTTGCTT GAAATGAAAT ATTGTATCTT GTTATGTTGT TTACAAATTA ATTTTTATTT TCATGCAGCA
TCTTAGAATT TCTTGGACTA GCTTTTGTTT TTGTTTTTCA ATTAATTATT GATTTATTTG GTACTGAGGG TTTGAAATAA
AGTGGACCTT TACATTTCAC TTATTTACAC TGATTGAAGT GTCTGTCTGT GGAATGGTAC AGGTTTCCAC AAGGAGTTCC
CTGGGTCCGT TATCGTGGGA CATACAAAAA TCTCAATGTA AGCTTGATCT GGCCTGGAAA AGATCCTGTT TTAGGTAAGG
ATGTTGGTCT TTTTCAATTT GATTGGTTGG AAGAAATGTA ATGAGATGGG AATAATGAAT GGGTTGCTAT GAAGCTTTTC
CCAATCCAAA CCTCTAGGAA CAAATATAAA AACATGATTT CTGCCCGCTT TTATGAAGCC TGGATTTTGT TTTTTGAATA
TGTTACATGG GCAGTAGTTT GAATGTCTGT CGGTATAACT ATAACATGCC TCCATTCCAT GTTTTTAAGA AACATAAAGA
AAGCGGCAAT TTTGTTTTGA CTGCTAGTTT TCTTTTTGGC AGAGTTCTGA TCTATTTCTT TCAGGGGTTG ATAGCGTAGG
CACAATATCA TCTGCTCTTG TAACATATGC CGCTATACAA ACGTTACAAC CAGACTTGAT CATCAATGCA GGAACTGCTG
GTGGCTTCAA GGTAAGCACT TTTTTCCCCT GAGCAATAGC CTTAGGATAG CTGATTTTCT AGTTTTGTAC CCCCCAAAAA
TGGCTGTACC TTAAAAAATG TGCTGTTTGT TAGGGTAGCT TTAGGGTACA TTGTGCTATT TGCTGGTCTC TTCCTTGTTT
AGCTAGCTTT GATCCTCCTT CCTGTGGAAT TGTAGTCATA TTCATTTTCA ACATACGAAT TAACTATCTG TTGCAATGTT
TTCCCTTTTC TACATGCCCT CTTGGTGTGA TTGATATAAC TGTTTTATTC ATCCTGTAAT CTATGTCAAA TAATTTTTTT
TGTCGTCTAA AAAATATTTT TATAACTTTC AATAAGTGAT CAAACAAAGT TAAACTAAAA CATTATTTGC AAACAATGAT
AGCCATTGAT TGTGCTTTAT AATTTTATAT AGAAATTGTT TAGTAATCAA GAAATGGATT AAACTAAATT GTATGATTAT
TTTAAGTGGC TTGACTGACC ATATGATTGC AATCTATTGA TGACAAGATT GTGTTTACCT GTCTGTGCAA TTGTTTGACT
TACCACAATT GATGTACATA TAACAAATAG TAACTCTTCA TACTAAATTA AAATGTTATA ACGATAGAGT ATGTAGCTAA
ACATATTATG GTGCAGTCAC AGATAAATGG ATTTGTATAT GCATGAGCAT ATTTATCTAA GTAGTGTTCA TTACTGGATG
CTTTCAGGCC AAAGGAGCTA GTATTGGCGA TGTGTTCATT GTATCAGATT GTGCCTTTCA CGACAGAAGA ATACCCATAC
CCGTAAGTGT TTTGTTATTC CTCTTGGTAG CTCTTGATTG CTTTGTCTTT GCCCCCTTGT CTACTTGAAG TATGTTTGAC
CGTGTCAACT TGATATTTAA GACTGCAATG CATATAATAT CTATTGTTTT GTTGTGTATG TACCGGAGGA AAAATGGGGA
AAGAGGATAA GAAAAGTATC ATTTATTTAG TTTGGACTTA TTTCTATCTT CTTAGGATTT GGTTCATTTT ACATGCGCTC
TTCTTTAATT CCAATAATGT TCTATCTACC ATAAAGCATT ATATACTCAT CTTGCTCTAG TTCATATTTA ACCATCAGAG
AAAAACTAGG GAAAGAGTAA CGTGGTTGAC CTATCAATAT CGTTAATTTT GACTTATTAA CATATCGGGT TAAATGCTAT
GTTTTCTTTT ACAATTTTCA GTTGTTCCAG TTAAGAATCT TGCATAGAAA CTATTGGCCG AGAGTTACCA TAACATATTT
TAATATTTTT CATTGAGAAT TGAGAATTAA TTTTTAATTC ATTGATACTT TGTTTCATGC TTGCAATGTA GTGAGGTAGA
AGTTTAGACA TCAGCATCTA TAATATGTTT GATATCTTTT GCAGGTTTTT GATCTGTACG GTGTTGGTTT ACGTAAAGCC
GTTGAAGCAC CCAACCTTGT AAGGGAGCTT AATCTAAAGG TGAGTGTTAT TTGCTAATAT GTATTTTTCT CCTGAAAAGA
AAACATTTTA TTTAAAATTC ACATTGCCAA CAATTACCTT GATATCACAA AATGTTGTCA TCCCAAATTC TGAGATAGAT
TTCATTTGTT AACCAGATTA CCTAGATTGA AGAACTGCCC TGCTAATTTT TGTGAAGTTT GTACCTTTGA TCACACAAAT
TGTCATGATT TTTAGGATTG TCTTGGCTTG ATGGTTTGAC TAGGAGTACA TTTGAGATTA GTCACTCCTG CTGATATCTT
GGATGTAAGA TGTATGTTTA GCCTAGTTTA TGAATTGGTA TGCCTAGTAT TTCTTTCTGA TAAAGTAGAG ATTTACATGT
GTTTTCTATC AAACAATGTC AAGCTATGAA TAATTAATCA TAGATGAATG GAAAATCCAT AAAGCCTTTT TTTTATGACA
ATCTAAGAAA TGTTAAGTTT CCAGGTTGTT GACCATTACT TTTGTCTAGT TATTAATGTA TTTATCTCTC TGTTATTGCT
TATTACCTTT ATGTGTTCTT TAGAGGCCAG GCACTACAAT TTTGGCATAG TTTTGGAGTT TGGACCCATA CCCTATACAG
TATACTGAAT GGAATATTTG TCTTGAATAT TGGTGTATGA GGAGGTTACA AATGTATTGC TGGTTTGCAT TGAAAATCTT
GCAAATAAAT AAATTGCTTT AACTTCGATC ATAATAATAG TAGATCACTT GCACACAAAA TAAAACATCC TAGACAGAAG
AAAGGTGATG TTCCATTTTA CAGTTCAAAC AGATGAAAAA TGTCCTTTGG TTTGTTTCCT GGTGTTATTG TGGTCGGTTC
TTTTGTTTAG ATAAATTGTG CAGAACTTAA ACCCAATGAA AATCTATTCA TATTTCAGGT GGCTAAATTG TCAACTGGCG
ACTCTTTAGA TATGTCACAG CAGGATGAAT CATCCATCAT TGCAAATGAT GCCACACTTA AAGATATGGA GGTAACCTGA
TAAATTCGGT TACTCTAGAC TGTGGGATTT TCTGTTAATC TATGAGGAAT GGCATGAATC TACATTTTCA CAAATCACGC
CTTATTACAT AAAATAAACC CCCGCTTAAA TTGCAGAGAA CTGAATGATA ACTAATAGTA GTTTTTCCAT TGTTGAATAT
TGGCTTTAAC TCCCCGTTTC AACTTTTGCT CCAGGGAGCA GCTATTGCTT ATGTTGCTGA ACTTCTGAAA GTTCCTGCAG
TTTTTGTAAA AGCTGTGACT GATATCATTG ATGGTGACAA ACCAACTGCA GAAGAATTCC TGCAAAATTT AGCAGCTGTA
ACTGCTAAAC TTGACCTGGC AGTTGAAAAG GTTATCAATT TTATTAATGG AAAGTGCATA GCTGAACTTT GACAACCCAA
TTTCAGATTG AGTTTTGTTA TAAGCAATGT TGCTCGGTGG GCTCCAATTG TACACTACCA TCATTGATTG GGAATTTGTG
ATATTTAAGA AAAAAAATAC AAACTTATAA ATTGAAGACA TTGCTGCCCC ACCTCTTTCC TCTCTTTTGT ACCTGTTCTG
TTCTGATGAC CTTGCAGGCT GTCTAAGTTG TCTGGCAAAG ATTGTGGCAA TCATTGTAAA CATGTACGAT GATATATGCT
TCTAAGTGAA CCACTTAAAG GAATATGTTT GATTATTGTC TCAAATTTTC CATGATGATG AAATGATTGA GTAGCTTGAT
TTTAATAATG AAGTGTCCTA TTTTATGGTT GCCC

>Vigan.02G014400.01
CCGAGATAGA GAAAGAAGAG AAAAGTAGTA CGAATCTGCA ACAAATAGTC ATGGCTGCGC TTGGGGACCA ATCAGAAGCT
CCTCCTCCTC CTCCTGACCA GCAAGCCATG GCTTCCCAGA ACAAACCCAT TTCTAACATC GTCATCATCA TTGCTATGCA
GACGGAGGCA CTTCCCATCG TCAACAGGTT CCAGCTCACC GAGGAACCTA ATTCTCCGTT TCCACAAGGA GTTCCCTGGG
TCCGTTATCG TGGGACATAC AAAAATCTCA ATGTAAGCTT GATCTGGCCT GGAAAAGATC CTGTTTTAGG GGTTGATAGC
GTAGGCACAA TATCATCTGC TCTTGTAACA TATGCCGCTA TACAAACGTT ACAACCAGAC TTGATCATCA ATGCAGGAAC
TGCTGGTGGC TTCAAGGCCA AAGGAGCTAG TATTGGCGAT GTGTTCATTG TATCAGATTG TGCCTTTCAC GACAGAAGAA
TACCCATACC CGTTTTTGAT CTGTACGGTG TTGGTTTACG TAAAGCCGTT GAAGCACCCA ACCTTGTAAG GGAGCTTAAT
CTAAAGGTGG CTAAATTGTC AACTGGCGAC TCTTTAGATA TGTCACAGCA GGATGAATCA TCCATCATTG CAAATGATGC
CACACTTAAA GATATGGAGG GAGCAGCTAT TGCTTATGTT GCTGAACTTC TGAAAGTTCC TGCAGTTTTT GTAAAAGCTG
TGACTGATAT CATTGATGGT GACAAACCAA CTGCAGAAGA ATTCCTGCAA AATTTAGCAG CTGTAACTGC TAAACTTGAC
CTGGCAGTTG AAAAGGTTAT CAATTTTATT AATGGAAAGT GCATAGCTGA ACTTTGACAA CCCAATTTCA GATTGAGTTT
TGTTATAAGC AATGTTGCTC GGTGGGCTCC AATTGTACAC TACCATCATT GATTGGGAAT TTGTGATATT TAAGAAAAAA
AATACAAACT TATAAATTGA AGACATTGCT GCCCCACCTC TTTCCTCTCT TTTGTACCTG TTCTGTTCTG ATGACCTTGC
AGGCTGTCTA AGTTGTCTGG CAAAGATTGT GGCAATCATT GTAAACATGT ACGATGATAT ATGCTTCTAA GTGAACCACT
TAAAGGAATA TGTTTGATTA TTGTCTCAAA TTTTCCATGA TGATGAAATG ATTGAGTAGC TTGATTTTAA TAATGAAGTG
TCCTATTTTA TGGTTGCCC

>Vigan.02G014400.01
ATGGCTGCGC TTGGGGACCA ATCAGAAGCT CCTCCTCCTC CTCCTGACCA GCAAGCCATG GCTTCCCAGA ACAAACCCAT
TTCTAACATC GTCATCATCA TTGCTATGCA GACGGAGGCA CTTCCCATCG TCAACAGGTT CCAGCTCACC GAGGAACCTA
ATTCTCCGTT TCCACAAGGA GTTCCCTGGG TCCGTTATCG TGGGACATAC AAAAATCTCA ATGTAAGCTT GATCTGGCCT
GGAAAAGATC CTGTTTTAGG GGTTGATAGC GTAGGCACAA TATCATCTGC TCTTGTAACA TATGCCGCTA TACAAACGTT
ACAACCAGAC TTGATCATCA ATGCAGGAAC TGCTGGTGGC TTCAAGGCCA AAGGAGCTAG TATTGGCGAT GTGTTCATTG
TATCAGATTG TGCCTTTCAC GACAGAAGAA TACCCATACC CGTTTTTGAT CTGTACGGTG TTGGTTTACG TAAAGCCGTT
GAAGCACCCA ACCTTGTAAG GGAGCTTAAT CTAAAGGTGG CTAAATTGTC AACTGGCGAC TCTTTAGATA TGTCACAGCA
GGATGAATCA TCCATCATTG CAAATGATGC CACACTTAAA GATATGGAGG GAGCAGCTAT TGCTTATGTT GCTGAACTTC
TGAAAGTTCC TGCAGTTTTT GTAAAAGCTG TGACTGATAT CATTGATGGT GACAAACCAA CTGCAGAAGA ATTCCTGCAA
AATTTAGCAG CTGTAACTGC TAAACTTGAC CTGGCAGTTG AAAAGGTTAT CAATTTTATT AATGGAAAGT GCATAGCTGA
ACTTTGA

>Vigan.02G014400.01
MAALGDQSEA PPPPPDQQAM ASQNKPISNI VIIIAMQTEA LPIVNRFQLT EEPNSPFPQG VPWVRYRGTY KNLNVSLIWP
GKDPVLGVDS VGTISSALVT YAAIQTLQPD LIINAGTAGG FKAKGASIGD VFIVSDCAFH DRRIPIPVFD LYGVGLRKAV
EAPNLVRELN LKVAKLSTGD SLDMSQQDES SIIANDATLK DMEGAAIAYV AELLKVPAVF VKAVTDIIDG DKPTAEEFLQ
NLAAVTAKLD LAVEKVINFI NGKCIAEL*