GBrowse Details

Vigan.02G002400.01

Basic Information:
Name: Vigan.02G002400.01
Multiple alignment
Variant Information
Position: Chr02:201091..205001 (- strand)
Length: 3911
Functional Information:
Description: Similar to Iron-stress related protein. [Q8L8H3, Citrus junos]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:49.75,31.85,22.16,27.90,36.15,21.11,25.92,14.84
Automatic updates:
Name: NM_001248528 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100305698 (LOC100305698), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr02:201091..201136 (- strand)
Length: 46
Type: three_prime_UTR
Position: Chr02:201137..201336 (- strand)
Length: 200
Type: CDS
Position: Chr02:201820..201867 (- strand)
Length: 48
Type: CDS
Position: Chr02:203118..203306 (- strand)
Length: 189
Type: CDS
Position: Chr02:204601..204632 (- strand)
Length: 32
Type: CDS
Position: Chr02:204719..204795 (- strand)
Length: 77
Type: CDS
Position: Chr02:204796..205001 (- strand)
Length: 206
Type: five_prime_UTR

>Vigan.02G002400.01 class=Sequence position=Chr02:201091..205001 (- strand)
GACAAGATCT AATTTTGAAA TATAATCGCA GAGTGACAGA CGACTGAGAT TGAGTGACCC GAATACCCGA TCCATCACAT
CTTAATTATG AATTAGTAAT GATATATATG CTTTCTCTCC TCTTTGAATT CTAATTAAAC TCTTCTCTTT CTCTTTTCTC
TGTCTTTCGT AGAAGACGAG GAAGTAGTAG AGGCAGTTAG AGAAAGATGC TGGAGAATAT TCAGGCTGTT CCGGCGACGG
AATCCGCCCC AGTCGTCAAG CGCTATGCTC CTCCCAACCA GAGGTATTTT CTATTATTAT ATTATTGCTT GAATTACGTT
ACCCACTTCA CTTTTCAATT CCTAATATTT CCCATTCCTT CTTTTGCAGA AACCGTTCTG CCAACAGGCG CAAATCATCT
GGTCAGTTCA CTCCTATCTT TCTTCCAATC AATTGATCCT TTTATTTCTA TTTAGATGTC TCAATCACAT GCCTTGTGTT
ATTTATCACT GTCATTCCAA ATGGGTATTT AGTAATGTCA AATAAGTGCA GTCCCTTTTC GCCTAAAAGG GAGTAATGTG
TGTGCTTATT TTACTTTTGA AGTCGATCCC TTCCTAATTA GTTGCACAAG TCACGTTTGG TTGCAAATTT CATTTGCTAT
GGCTCAGTTA CTGCCCTATA GTGTTTATCT TTTCTCGATA GAATGGCAGG TAAAAAATTA AATCCAGTGT TTCTAGTTTG
GGTTTTTTCC TGATTTCAAA TACCATACTG TAGTTTCAAC TTTATTTCGT AACATATCCA TCTTTAACAC GTGAAAGTGT
AACATAAAAC TTGTCATTTT GAGGAAAGTA AAAAATAAAT ACATGCAGTC CTCACCCCTC ACACATCGTC ATTCTGCGAA
AAGAATATAT AAAAAATGGA ATAGGTTGGT TATATGGTAA TGGAATGAAT CTCAGGAGAA AATTTGACAA AGTTTGAACA
ACAAGGTTGG ACATTTGAAA TTGGGACAAA CTGGAGGGTG AGGAACCAAA TATAAGTAAG ACAACGCAAT ATAATGAACT
TAGCTTTGCT CGCCCTACAT ATGCATGAAA TTATGGGTTT ATACAAAGAA AAAAAGCAGG CTTAAGACTG TTCACTCCTT
TTAAACTCTT TCTTAATATA TCTTACTTTT GTAGTCTTTA TGAAATAAAT TCAAACCCTA ATGATCTTCT TCTGTATATC
AAAATATTGT CATGAAAAAT CATGAAAACT CTAAAGGCTA GAAAGGAATT TTTAAAAGGC CAAATATAAA TTGAATCACC
CTCCCCTCAG ATCCAGCTCT GTTGACAACA GACTAATGAA ACCAGTGTTG TCCTTAGCCT TCAGGCATTG TATTATCGGA
GAAAATTCGA AAGAAATATC ACATGAGAAT AATTGTGAGT TACCCTTACC TATCTGGTTT GCAAAACATA TATGCTACCG
AACTTCTTTA CTTTTTTAAT ATTAGTGCTA TGTTCTCAAT TATGGTACTT ACTGTTTACA GTGACAAGAA CTAAAATTAA
GAAAAGAAAA ATAGAATACT TGTTTCAGTA ACTTTCCTTA ATAACACACC ACTAATCTCA TTTGCATAAT TCACACTGAG
TAATGGCAAA AACTTTAGGC AAATTTTCTG TTAGTCCCCA TTTTAGTTAG TTTGTTTCTA ATTTCTAGCT GTTTGGTTTT
AATTAACTTA TGTAGATCGT CTTGATCGGA CAAACAGTGT TGGGACTGAG TTAGAAAAGA ATCAAGTCGC TCCTTCAAGA
AGTGTTCACA TTCCAGATCA TGGAGATGCT GGTAGCAGTA ATCTTATTAA CGAAAATCAC CATTCAAGAT TCATAGCTTT
AGAAGGGTGT GGTTGCAGTG CAGCTTCCCA GCTTCTTAAT GATCGTAAGT GTATCCCAAA CTTTTCTTGA AGAACTTGCA
TATATTGAGA AATTGAATAT TCTTTCACTC TGATGTTTTC TAGATTTCCT TATAAGCTCT CTAGAAACAT TACTGTTTGT
TCCTCTGTGG CAATGGCAAA TAACGATCGC TTTCAAAAAT TAGTAACCAT AGGTTTGTTT CAGACTCATC CTCAATAAAA
GGAGGTTGAG CAATTATAGT CAGGAGCAGT TAGTGAATAA CTAAGTGCAA GGTTGGTAGT AACAGTTAGG CCAACAGAAC
TAGGAAAGAA TGTAAAAGGA GGTGATAGAG GGAGTCAGGA GGATATTGTG TAAGAAAACT GAGAGTCGGC AGAGCCTTTA
GGTCTGTCAA AAACCAGGAA GTGTCATTAG AAGAGAATTC AGACCCTTGT ATACAATAGT CCTCGGATCA ATTATTACCT
TTATACCGTT TAACGCATTC TCTTTGTCAT AAAATTTCTT ACCTTGTTGA GAACCATTTT TGTCATGTTA TCATTATTAC
TTTGTTTCCT AATTTCCTTT ACTGAGAAGA TATGTATATC ATGTAATCAT AAAACAAAAT TCAAAATTAA AAAGTCCATG
ACATGACAAG TAACAAGTAA AATTTTTTAC ACACACAGTC ATCATCCATC TTGGAGCAAT AGGAACATGG TAATGAAGTC
ATAGAATGAA AGTTGATTTC GAAACTGGAA TATTTTTTGT AGTTATTTTC AGAAAAAGCT ATGTTAGTTT AGAGTAGCTT
AGTCAAGGAT ACGTTTGCTC CCCTACTTTG ACTATGATTG CAAGTAGGAT TCTTCCTCAT CTGGAATCTA GATCCATGAC
TCGATCATAA TTGAATTCAG AGCCATGTTA GTTGACAGAA AAAATTTAGA AGCGAAGTTA GATTAGATGG TCAATGTTCA
GTCTATCTGT TTCCGTACCA AATTATAATT AATTCTCAAG TCCAAAGCAA TGCCAACATT CTCCTACTTT GTTTTGCTTA
TTATGAATAT ATCTTTTCCA TTTAATTCTG TCTACATGGT TACATGCCTT TTTGTTTCAT TAGAGGTTTT ATTGTCCTCG
GCATTTTAAC TATTCAGCTT TGCACAACAC ATTGAGTTTA TTGGATTGCA AAGAGAAAGG GATGGGTGGG TGAGGCTGGA
GTTTGTTCAT TTACTTACAA GCTCATTATG TTTTGTCCAT ATCCGTGGTT AACATTGCCT GTTATCTTTG TTGGCCATAA
ATTTACGTTT TCAGGTTGGG CAGCTGCAAT GCAATCCTAC AATAATTCCA AAGACTCATC TGGTTAGTGC CCAACCATCA
AAGATTATTT TCTTTTTCCC ATGTTATGAA CACTTGCCAT TTTGTTTACA GTATTTGATG ACTATGAAAC TCGAACTTGT
TCTGTGTGTC TAAGAAGTTC TTAGTGTATT AAATTGAGGT CACACTGTAT ATATGAAATT ATTCGGACTG ATTTCTTGTA
ATTGTATTTG TACTTAACTA CAAATTTAAA GGGAAGAAAA ACTAATATTC TTAACTTCTT CATAAGCTGG CAAGTGGACA
AGTTTATTTG ACTGAATAGC TTTTCTCTTT TTCTGATAAT TTCTTCTGAT ATAAACCGAA GTAGCCAAAA ATCCTGCTCA
TGTAATTAAT ATGCATATTA TTTTGAAGCA TCTATCATGT ACGGCTTTGG TAAATACAAG TAATAGTAAA TTTTGTGCTG
CATAAGAGCT CTCAAGCAGG GCATGAAGCC TGCCTTTTAA TTTTCGTGCT ACTTTACCAT TTCAGACAAG CCAGTCATGT
ATTCGAGTGG TGCGTCAGCA TGGACTCAGC AGCAGTTTAG ACCTCCTCAG CAGGTAATCA CTTTCCCTTA CCTTGTGATT
ACATTCTCCT TTTCAGGTTA TGCAGCCATC TATAAGTGCT TCTTCCTCTT GTGTGTCACA GCAGGATTTC CTGGCAGAAC
TTCGTCGCCA AATGCAAAAC GCTAATCCTA ATTCCACATG ATGGCTCACT TGGATGGCTT GTCTAATAAA G

>Vigan.02G002400.01
GACAAGATCT AATTTTGAAA TATAATCGCA GAGTGACAGA CGACTGAGAT TGAGTGACCC GAATACCCGA TCCATCACAT
CTTAATTATG AATTAGTAAT GATATATATG CTTTCTCTCC TCTTTGAATT CTAATTAAAC TCTTCTCTTT CTCTTTTCTC
TGTCTTTCGT AGAAGACGAG GAAGTAGTAG AGGCAGTTAG AGAAAGATGC TGGAGAATAT TCAGGCTGTT CCGGCGACGG
AATCCGCCCC AGTCGTCAAG CGCTATGCTC CTCCCAACCA GAGAAACCGT TCTGCCAACA GGCGCAAATC ATCTGATCGT
CTTGATCGGA CAAACAGTGT TGGGACTGAG TTAGAAAAGA ATCAAGTCGC TCCTTCAAGA AGTGTTCACA TTCCAGATCA
TGGAGATGCT GGTAGCAGTA ATCTTATTAA CGAAAATCAC CATTCAAGAT TCATAGCTTT AGAAGGGTGT GGTTGCAGTG
CAGCTTCCCA GCTTCTTAAT GATCGTTGGG CAGCTGCAAT GCAATCCTAC AATAATTCCA AAGACTCATC TGACAAGCCA
GTCATGTATT CGAGTGGTGC GTCAGCATGG ACTCAGCAGC AGTTTAGACC TCCTCAGCAG GTAATCACTT TCCCTTACCT
TGTGATTACA TTCTCCTTTT CAGGTTATGC AGCCATCTAT AAGTGCTTCT TCCTCTTGTG TGTCACAGCA GGATTTCCTG
GCAGAACTTC GTCGCCAAAT GCAAAACGCT AATCCTAATT CCACATGATG GCTCACTTGG ATGGCTTGTC TAATAAAG

>Vigan.02G002400.01
ATGCTGGAGA ATATTCAGGC TGTTCCGGCG ACGGAATCCG CCCCAGTCGT CAAGCGCTAT GCTCCTCCCA ACCAGAGAAA
CCGTTCTGCC AACAGGCGCA AATCATCTGA TCGTCTTGAT CGGACAAACA GTGTTGGGAC TGAGTTAGAA AAGAATCAAG
TCGCTCCTTC AAGAAGTGTT CACATTCCAG ATCATGGAGA TGCTGGTAGC AGTAATCTTA TTAACGAAAA TCACCATTCA
AGATTCATAG CTTTAGAAGG GTGTGGTTGC AGTGCAGCTT CCCAGCTTCT TAATGATCGT TGGGCAGCTG CAATGCAATC
CTACAATAAT TCCAAAGACT CATCTGACAA GCCAGTCATG TATTCGAGTG GTGCGTCAGC ATGGACTCAG CAGCAGTTTA
GACCTCCTCA GCAGGTAATC ACTTTCCCTT ACCTTGTGAT TACATTCTCC TTTTCAGGTT ATGCAGCCAT CTATAAGTGC
TTCTTCCTCT TGTGTGTCAC AGCAGGATTT CCTGGCAGAA CTTCGTCGCC AAATGCAAAA CGCTAA

>Vigan.02G002400.01
MLENIQAVPA TESAPVVKRY APPNQRNRSA NRRKSSDRLD RTNSVGTELE KNQVAPSRSV HIPDHGDAGS SNLINENHHS
RFIALEGCGC SAASQLLNDR WAAAMQSYNN SKDSSDKPVM YSSGASAWTQ QQFRPPQQVI TFPYLVITFS FSGYAAIYKC
FFLLCVTAGF PGRTSSPNAK R*