GBrowse Details

Vigan.01G549100.01

Basic Information:
Name: Vigan.01G549100.01
Multiple alignment
Variant Information
Position: Chr01:66717847..66720200 (+ strand)
Length: 2354
Functional Information:
Description: Similar to Uncharacterized protein. [O64970, Glycine max]
GO: Biological Process: response to oxidative stress (GO:0006979)
Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: peroxidase activity (GO:0004601)
Molecular Function: heme binding (GO:0020037)
InterPro: Plant peroxidase (IPR000823)
Haem peroxidase, plant/fungal/bacterial (IPR002016)
Haem peroxidase (IPR010255)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:29.53,557.96,875.71,782.08,294.88,3274.14,162.79,841.54
Arabidopsis thaliana homolog: AT4G21960.1
Automatic updates:
Name: NM_001250672 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max cationic peroxidase 2 (PRX2), mRNA.
PubMed ID: 10561068 NCBI(pubmed)
Status: Known Variant
Name: NM_001251254 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max peroxidase (PRX2B), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:66717847..66717930 (+ strand)
Length: 84
Type: five_prime_UTR
Position: Chr01:66717931..66718152 (+ strand)
Length: 222
Type: CDS
Position: Chr01:66718267..66718455 (+ strand)
Length: 189
Type: CDS
Position: Chr01:66718710..66718875 (+ strand)
Length: 166
Type: CDS
Position: Chr01:66719201..66719619 (+ strand)
Length: 419
Type: CDS
Position: Chr01:66719620..66720200 (+ strand)
Length: 581
Type: three_prime_UTR

>Vigan.01G549100.01 class=Sequence position=Chr01:66717847..66720200 (+ strand)
ATTATTTCTC TTTATTTGCA CTTGGGCTTT ATTTAAGCAG AGGCAGAGAA GAGTGTAAGC AGGAGAGTGA GTGAGTTAGT
GAGAATGGCT CTCAAGTCTC TGATTCTTTT GGCTGTGTTA TCCTTTTCAG CACTGTCCCT GAGTCCTTCT CTTGCAGAAG
ATAATGGCCT TGTCATAAAC TTCTACAAGG AAACTTGTCC TCAGGCCGAA GACATCATCA AAGAACAAGT CAAGCTTCTC
TACAAGCGCC ACAAGAACAC TGCTTTCTCT TGGCTCAGAA ACATCTTCCA TGACTGTGCT GTTCAGGTCA TTCATTAATC
TTGCGTTTTC TTTTTTCTTT GCAAGTTTCA TGTTCTTAAG CTTTTTACGG CTTTTGTCGG TTAATCTTTA ACGAAAGAGT
TTGCCTTTTC TTTTGGGTAG AGCTGTGATG CTTCACTGTT GCTGGACTCC ACAAGAAGGA CCTTGTCTGA GAAGGAGACA
GACAGAAGCT TTGGTTTGAG GAATTTCAGG TACATTGAGA CCATCAAAGA AGCTGTGGAA AGGGAGTGTC CGGGAGTTGT
TTCCTGTGCT GATATACTCG TTCTCTCTGC CAGAGATGGC ATTGTTTCGG TAATTAACAC CTTGTCCTTT CTTTTTGTTT
TCTTCCACTT CTCACTTCCC TCACCCTTTT TCATCTTTTA AGGAAGTTCA CTTTTTAGAG CTAAATATGC TATCCCAAAT
CTGTCAACTG TTTCTACCAG ATCGCTCTAT TTTTAGTGTG AAGGAAGTAG AATTTGGAGT CCAGAATTGT TTTGGCAACT
GCAAGAAATT ATTCTTATAG TTAATGTTTT TGATTCAAGC CAACCAAATT TAATGTGTTG CAGCTAGGAG GCCCCCATAT
CCCTCTTAAA ACTGGAAGAA GGGATGGTAG AAGGAGCAGA GCTGAAGTGG TTGAACAGTT CCTCCCAGAC CACAATGAGT
CCATTTCTTC AGTTCTTGAC AAGTTTGGTG CCATGGGAAT TGACACTCCC GGGGTGGTTG CTTTGCTTGG TATGCACTAA
TCTACATACA CCCTTCCATA ATCCATCATC TACATACACA ATAAATTATT ATGCAAATCT TGCACCACCG TACTTGATTT
TTTCATCCAA AATTTGGACT TTGTGACCTT AGTGGTCCCT GTATATGTAA TAATTTCCCT TCATAATGCA TACATAAATG
TAAGTGGGCT CTGTATGATG ATGAATCAGA GATAAAGATA TATTAAACTT GAAAACAACA GACATGAAAA AATGCTAAAG
AAATTACATG CTCAGAAAGT GGCATTATTG CTTGCTGATT TAAGTTATAA TGATTGAGAT ATTTTGTTGA ACAGGAGCAC
ACAGTGTTGG TAGAACACAT TGTGTGAAGT TGGTGCACCG TTTGTACCCG GAGATTGATT CGGCACTGAA CCCTGACCAT
GTCCCTCACA TGCTGAAGAA GTGCCCTGAT GCCATTCCAG ATCCGAAAGC CGTGCAGTAT GTGAGAAACG ACCGTGGCAC
CCCCATGATT CTAGACAACA ACTACTACAG AAACATATTG GACAACAAGG GGTTGCTGAT AGTGGATCAC CAACTAGCCA
ATGACAAGAG GACCAAGCCT TATGTGAAGA AAATGGCCAA GAGCCAAGAC TATTTCTTCA AGGAGTTTTC TAGAGCCATC
ACCTTGCTCT CTGAAAACAA TCCTCTCACT GGCACAAAGG GAGAGATCAG AAAGCAGTGC AATCTTGCCA ACAAGCACCG
TGAGGAGCCT TGAAATTCTT CCTCCTTCTC TGTGAGGAAG AAATCTGTAA AATATTATGC TGTGTTTTAT TTTAAATGAG
TAGGTTGGCT TGTCGGCAGG TTCATGGGGA TGTGAGGACC GAGATGTCAC TGTTGTTTTT TTATTTCAAT AAGGATGTTA
TATTTAGTAT GCTAGTAGAA GTTGGGTAGA AGGACATGTT CACGGTGTTA ATTATGATAT CAATGTATGC ATGTGATTGC
TGTCATCGAT GGCAGTGACA ACAATGTTTA TGGTATCCAC ACTCAGAAGT TTGTTCTTTC TTTCAACATA ATCATGGTAT
TTACATTGCT ATCTATCCTA TTCAAATAGG CTCCATGATA GAGACTAGAT GAAGCAAAAT TTAGGAATCT ATCAAGTAAC
AAAATGCATA GTCTTTTTAA ATTGTCCTCA TTTTTTTGAA TGTAGCTTGG CAAACACATT AAGCCAACCA TATGTATAAT
TGCAGAGTAA AATAATTGCT CATAGATACT GTCCTATGTA TAACTGGTCC AAAAAGAAAG ATGAAGTAAA ACAAAAGTGG
TGGTCCATTG GCCTAACCCA CTTCAATATT TGAA

>Vigan.01G549100.01
ATTATTTCTC TTTATTTGCA CTTGGGCTTT ATTTAAGCAG AGGCAGAGAA GAGTGTAAGC AGGAGAGTGA GTGAGTTAGT
GAGAATGGCT CTCAAGTCTC TGATTCTTTT GGCTGTGTTA TCCTTTTCAG CACTGTCCCT GAGTCCTTCT CTTGCAGAAG
ATAATGGCCT TGTCATAAAC TTCTACAAGG AAACTTGTCC TCAGGCCGAA GACATCATCA AAGAACAAGT CAAGCTTCTC
TACAAGCGCC ACAAGAACAC TGCTTTCTCT TGGCTCAGAA ACATCTTCCA TGACTGTGCT GTTCAGAGCT GTGATGCTTC
ACTGTTGCTG GACTCCACAA GAAGGACCTT GTCTGAGAAG GAGACAGACA GAAGCTTTGG TTTGAGGAAT TTCAGGTACA
TTGAGACCAT CAAAGAAGCT GTGGAAAGGG AGTGTCCGGG AGTTGTTTCC TGTGCTGATA TACTCGTTCT CTCTGCCAGA
GATGGCATTG TTTCGCTAGG AGGCCCCCAT ATCCCTCTTA AAACTGGAAG AAGGGATGGT AGAAGGAGCA GAGCTGAAGT
GGTTGAACAG TTCCTCCCAG ACCACAATGA GTCCATTTCT TCAGTTCTTG ACAAGTTTGG TGCCATGGGA ATTGACACTC
CCGGGGTGGT TGCTTTGCTT GGAGCACACA GTGTTGGTAG AACACATTGT GTGAAGTTGG TGCACCGTTT GTACCCGGAG
ATTGATTCGG CACTGAACCC TGACCATGTC CCTCACATGC TGAAGAAGTG CCCTGATGCC ATTCCAGATC CGAAAGCCGT
GCAGTATGTG AGAAACGACC GTGGCACCCC CATGATTCTA GACAACAACT ACTACAGAAA CATATTGGAC AACAAGGGGT
TGCTGATAGT GGATCACCAA CTAGCCAATG ACAAGAGGAC CAAGCCTTAT GTGAAGAAAA TGGCCAAGAG CCAAGACTAT
TTCTTCAAGG AGTTTTCTAG AGCCATCACC TTGCTCTCTG AAAACAATCC TCTCACTGGC ACAAAGGGAG AGATCAGAAA
GCAGTGCAAT CTTGCCAACA AGCACCGTGA GGAGCCTTGA AATTCTTCCT CCTTCTCTGT GAGGAAGAAA TCTGTAAAAT
ATTATGCTGT GTTTTATTTT AAATGAGTAG GTTGGCTTGT CGGCAGGTTC ATGGGGATGT GAGGACCGAG ATGTCACTGT
TGTTTTTTTA TTTCAATAAG GATGTTATAT TTAGTATGCT AGTAGAAGTT GGGTAGAAGG ACATGTTCAC GGTGTTAATT
ATGATATCAA TGTATGCATG TGATTGCTGT CATCGATGGC AGTGACAACA ATGTTTATGG TATCCACACT CAGAAGTTTG
TTCTTTCTTT CAACATAATC ATGGTATTTA CATTGCTATC TATCCTATTC AAATAGGCTC CATGATAGAG ACTAGATGAA
GCAAAATTTA GGAATCTATC AAGTAACAAA ATGCATAGTC TTTTTAAATT GTCCTCATTT TTTTGAATGT AGCTTGGCAA
ACACATTAAG CCAACCATAT GTATAATTGC AGAGTAAAAT AATTGCTCAT AGATACTGTC CTATGTATAA CTGGTCCAAA
AAGAAAGATG AAGTAAAACA AAAGTGGTGG TCCATTGGCC TAACCCACTT CAATATTTGA A

>Vigan.01G549100.01
ATGGCTCTCA AGTCTCTGAT TCTTTTGGCT GTGTTATCCT TTTCAGCACT GTCCCTGAGT CCTTCTCTTG CAGAAGATAA
TGGCCTTGTC ATAAACTTCT ACAAGGAAAC TTGTCCTCAG GCCGAAGACA TCATCAAAGA ACAAGTCAAG CTTCTCTACA
AGCGCCACAA GAACACTGCT TTCTCTTGGC TCAGAAACAT CTTCCATGAC TGTGCTGTTC AGAGCTGTGA TGCTTCACTG
TTGCTGGACT CCACAAGAAG GACCTTGTCT GAGAAGGAGA CAGACAGAAG CTTTGGTTTG AGGAATTTCA GGTACATTGA
GACCATCAAA GAAGCTGTGG AAAGGGAGTG TCCGGGAGTT GTTTCCTGTG CTGATATACT CGTTCTCTCT GCCAGAGATG
GCATTGTTTC GCTAGGAGGC CCCCATATCC CTCTTAAAAC TGGAAGAAGG GATGGTAGAA GGAGCAGAGC TGAAGTGGTT
GAACAGTTCC TCCCAGACCA CAATGAGTCC ATTTCTTCAG TTCTTGACAA GTTTGGTGCC ATGGGAATTG ACACTCCCGG
GGTGGTTGCT TTGCTTGGAG CACACAGTGT TGGTAGAACA CATTGTGTGA AGTTGGTGCA CCGTTTGTAC CCGGAGATTG
ATTCGGCACT GAACCCTGAC CATGTCCCTC ACATGCTGAA GAAGTGCCCT GATGCCATTC CAGATCCGAA AGCCGTGCAG
TATGTGAGAA ACGACCGTGG CACCCCCATG ATTCTAGACA ACAACTACTA CAGAAACATA TTGGACAACA AGGGGTTGCT
GATAGTGGAT CACCAACTAG CCAATGACAA GAGGACCAAG CCTTATGTGA AGAAAATGGC CAAGAGCCAA GACTATTTCT
TCAAGGAGTT TTCTAGAGCC ATCACCTTGC TCTCTGAAAA CAATCCTCTC ACTGGCACAA AGGGAGAGAT CAGAAAGCAG
TGCAATCTTG CCAACAAGCA CCGTGAGGAG CCTTGA

>Vigan.01G549100.01
MALKSLILLA VLSFSALSLS PSLAEDNGLV INFYKETCPQ AEDIIKEQVK LLYKRHKNTA FSWLRNIFHD CAVQSCDASL
LLDSTRRTLS EKETDRSFGL RNFRYIETIK EAVERECPGV VSCADILVLS ARDGIVSLGG PHIPLKTGRR DGRRSRAEVV
EQFLPDHNES ISSVLDKFGA MGIDTPGVVA LLGAHSVGRT HCVKLVHRLY PEIDSALNPD HVPHMLKKCP DAIPDPKAVQ
YVRNDRGTPM ILDNNYYRNI LDNKGLLIVD HQLANDKRTK PYVKKMAKSQ DYFFKEFSRA ITLLSENNPL TGTKGEIRKQ
CNLANKHREE P*