GBrowse Details

Vigan.01G534100.01

Basic Information:
Name: Vigan.01G534100.01
Multiple alignment
Variant Information
Position: Chr01:65658028..65661367 (- strand)
Length: 3340
Functional Information:
Description: Similar to Uncharacterized protein. [I1KN93, Glycine max]
GO: Biological Process: protein dephosphorylation (GO:0006470)
Biological Process: dephosphorylation (GO:0016311)
Molecular Function: protein tyrosine/serine/threonine phosphatase activity (GO:0008138)
Molecular Function: phosphatase activity (GO:0016791)
InterPro: Dual specificity phosphatase, catalytic domain (IPR000340)
Protein-tyrosine/Dual specificity phosphatase (IPR000387)
Dual specificity phosphatase, subgroup, catalytic domain (IPR020422)
Dual specificity phosphatase (IPR024950)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:5.71,4.78,7.89,6.00,11.99,5.90,6.30,8.43
Arabidopsis thaliana homolog: AT3G23610.3
Automatic updates:
Name: NM_001250379 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306342 (LOC100306342), transcript variant 1, mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:65658028..65658746 (- strand)
Length: 719
Type: three_prime_UTR
Position: Chr01:65658747..65658912 (- strand)
Length: 166
Type: CDS
Position: Chr01:65660280..65660400 (- strand)
Length: 121
Type: CDS
Position: Chr01:65660738..65660873 (- strand)
Length: 136
Type: CDS
Position: Chr01:65660966..65661091 (- strand)
Length: 126
Type: CDS
Position: Chr01:65661092..65661367 (- strand)
Length: 276
Type: five_prime_UTR

>Vigan.01G534100.01 class=Sequence position=Chr01:65658028..65661367 (- strand)
GAAGGATTTT GATGACGAAG AAAAAGGGAA GAAAGCAATA AGTTTGTTAC AAATATTTCA CAGCAATCAA TTTGCACGCT
TTGTTGGTAA GTTCTTCTCC TTCCTCGCAA AACACTATAT CGCATTCACA TCCATCTGCT CTAATCGTAA CCTTTTTTAC
CAGAATATTT TGCAATCAGT TTGTGTTCCG TGTTCGATTT TCATTTCTTA TTTATTGACT ACCAACGATT CATGTTAATA
TTGAATTGAT GTTTATTGTT TTAAAGGGGA TCGAGAATGA GCACCTCAGC GGCTATAGAA CAATTTGACA AATGCATGAA
TGGGCAAATA GAAGTTATCG CACGGGTTTG GCATTTATTT CAAGCCTACA AAAAGGACAA AAGTCCTTTC AAAATAGATG
AGGTACAATT CTAATTTCAT TAGGACTTCT TTTGAATGCA TTCTGTTTGT GTTAAAGGCT GTTATTCTGT TATTGCTGTG
TGTTATGGAT GCAGGGTCTG TATTTGGGTT CGATTGGCAC TGCAGTTAAC AAAGCTTCTT TGAAAGACCA TAATATTACT
CACATTTTGA CTGTGGCTGG TAGAATACCA CCTGCACATC CTGATGATTT TGTCTATAAA ATTATACATG GTATGCTAAT
TTTCTTTGAA TCAAACTTTG CTTTGCATTT CACATCGATC TATAAATGTT TGTGACTGGT GATCGATGAG CGGATTTTAA
AATTGATGTA GGGTTATTCT GATTGGGATT TGTTGCCATT GAAAGGTGTT TCACGACTTA TAATTGAAAC ACAATGAATG
GGATTACCCT GTGCGCTTTA GGATAACAAT TGTGTTTGTT TGCTATTCTG AAAGTGCATG CTTTGGCTCT TCAAAGTTTT
GTATGCTGTT GCTGTCAAAG TATATAAGGT TACTATCTAG TACCGTGTCC ATACTAAATA TATGATTTTG TGGGAAAATT
GAGGCAGTTG TTGACAAAGA CGATGAAGAC TTAAGACAAT ACTTCAATGA GTGTTTTGAT TTTATTGATG AAGCCAAAAG
ACTCGGTGGA GGTGTTTTGG TTCACTGTTT CGCTGGAAGA TCAAGGAGGT AGCTTCTATT CCTTTCTCCC TTGTTTACGT
GCGATCACTT CCTGTTCTTG ATAATTTCGT GCATTTTCTG GTTTAAATTA TGTGGAACAC TGTTTCACGA GAAAAAAAAA
CTAGACTCTT GTAGGAACAG AGTAAACTGA ATAACATCTC TCGTGTTTTG ATTGATCAAC TGAACCATTG AAAAGTACAA
GGACTTAGCT ATATAGAGCT AAGTAATCAA GAAAAGAGGA GGACACTTCC TCTGACAGAA AACATACTTA CAGTAACAGC
AGCAACAGTT ATTTTAACTG TTTAACTATG TAAAACTATC TCTAATAGAC CCAACGTGTA TTTCATTATT CATTGGCCTT
CGGATGCTGG CTCCGATACC CACTGATATA AAAGGTGGCC CCCAATGCAC AAGGCTCTTA CCCAGTGAGG TCTTTGGAAG
GGCGGTGGAG AGGATAGACA CGGCCTTAAA TCCCACGAAT GGGAAACTAT TTCTGGGATT TGAGCCTGCC ATCACTAGGT
CACAAGCGGC AATCTTACTT TAAGGTTGCT CCAGGGTTCA CTCCTTTTCA TATAGTGGTG ATAACATAGA AAATCGCTCG
CACATGAGTC TAAGTAACAA GTTTTACATG AAAAGTCTGG TAAACATCTG TTTGCCTTAC AATTTTGTTA CAAAGATTGC
ACGGGGCACG CCACCAGTGT TCATTTTCCT TGTAAAATAT CTTTACATAT CTTGTTATAT TACAGTATTT CTTGAAACCT
ATTGTAACAA AGTTTTGAAC AAGTATAATT ATCATATGTG TGATGATGTG TTGGATTTAA GTTTTCGACT GTTGTGCTAA
ATGTGAAATG GTTTTCATAT AGAAAACTGT AAATCTGTTG TAGCCTTGAG TATTATTGGT ATCCTTTTGT TGTTTTCTCT
GCTTCATTGT TCATTTATTT TCTTTTTCTG GAATCTGTTT TTGTATGGAT TCTTCCACTT GCATGTATTG AAAATTTTAA
ATAATAATAA AGGTTCGTGT GGCATGAGTT GAATCAAATC ATTATTTTTC TTGCTTCGAG GTTGTTGACT ATCAAATCAT
TATTTCTTGC TTCGATTTTC AAATGCTGTC AAATTTTTAA ACATCTAAGA AATAAGTTAA AGCTTAAGTT TGTTAACATA
CTTAAAATAT AGAATTAAGG ATGTAGCTTG AATTTCAAGA GTGGTTAATT ATCTCCTTCC GTAACTTCAG TTCTGCATGA
AACTCTTGCT TGCATTTTAA TGCCCAAATC TGAACTTCTT AAAAAAAATC TTGGTATATT TGTTGTTTTG TTATTTTTAT
TTTCTTATGA CGATGAACTG ATGAAAATTG CTGCTAATAA TGTTACACCT TGCAGTGTGA CTATAGTTGT TGCATATCTG
ATGAGGACTC GTGGAATGAG CCTTTCTGAA GCTCTGCAAC ATGTAAGGAG TATACGACCA GAAGCACGTC CCAATCAGGG
TTTTATTTGT CAGCTGGAGG ACTTCGAAAA GTCTCTTCAA GGTGCCTCTA AGTCACTTTA GTCTCTTTAT TTCAATTGCA
TCCTAACTTG ATGCATTATT CATAAGCTCA TCTGAAATAT ATTGAACCAT CAAGATACAT TTAAAATTAC ACATCGTTGC
ATGTAAGGAG ATGAAATCTG TAATGATAGC TTAAACCTAA CGATTTTACG TGCACACTGT TAATCTAGTA GAATGTGCAT
GATAAAGAAA GTAAAGAGTT TTGTTTTCAA TTAATCACAA CTGTTGCAAT TGTCAAACAT TTTGCATGTC GGAACACAAT
CACATACTTC AATTTATTAT TAGCCGATGA GATGATACCT CAGAACATAA TACGTTTATG TTAATCCTCA TCTTCCGTGA
AACCATATTT CACAGCCTTG TGTTTCTCTT TTTATTTCTC GGAATCCAAA TATTATTACA CGACATTATG AAGATGAAGA
GTAGGTGGCT TTTGGAATAA AAAGTCGTTT TCTTCCCAAG TAATTGTTTT TGGAAATGGG ATTAAGATTA AGATTAAGAA
TATGATTCCT GAAGAAAATT GCAGAGCACA TTCAGTTGCT ACGGGAAAGC TTAGTAACTT TACAATCACC CATGGGAATG
TTTTATTGAC AAAGTGATTA AAACATCTTT CGCTCACCTT TTTCTTATCC GAGGCTATTA AAACTGCGAT TGTCAAATTG
GTGGTCTGGC TCCACCGAGC ATGATCCTAC GGGCAACTCA AACAAGGCAG TCTTTCAAGC 

>Vigan.01G534100.01
GAAGGATTTT GATGACGAAG AAAAAGGGAA GAAAGCAATA AGTTTGTTAC AAATATTTCA CAGCAATCAA TTTGCACGCT
TTGTTGGTAA GTTCTTCTCC TTCCTCGCAA AACACTATAT CGCATTCACA TCCATCTGCT CTAATCGTAA CCTTTTTTAC
CAGAATATTT TGCAATCAGT TTGTGTTCCG TGTTCGATTT TCATTTCTTA TTTATTGACT ACCAACGATT CATGTTAATA
TTGAATTGAT GTTTATTGTT TTAAAGGGGA TCGAGAATGA GCACCTCAGC GGCTATAGAA CAATTTGACA AATGCATGAA
TGGGCAAATA GAAGTTATCG CACGGGTTTG GCATTTATTT CAAGCCTACA AAAAGGACAA AAGTCCTTTC AAAATAGATG
AGGGTCTGTA TTTGGGTTCG ATTGGCACTG CAGTTAACAA AGCTTCTTTG AAAGACCATA ATATTACTCA CATTTTGACT
GTGGCTGGTA GAATACCACC TGCACATCCT GATGATTTTG TCTATAAAAT TATACATGTT GTTGACAAAG ACGATGAAGA
CTTAAGACAA TACTTCAATG AGTGTTTTGA TTTTATTGAT GAAGCCAAAA GACTCGGTGG AGGTGTTTTG GTTCACTGTT
TCGCTGGAAG ATCAAGGAGT GTGACTATAG TTGTTGCATA TCTGATGAGG ACTCGTGGAA TGAGCCTTTC TGAAGCTCTG
CAACATGTAA GGAGTATACG ACCAGAAGCA CGTCCCAATC AGGGTTTTAT TTGTCAGCTG GAGGACTTCG AAAAGTCTCT
TCAAGGTGCC TCTAAGTCAC TTTAGTCTCT TTATTTCAAT TGCATCCTAA CTTGATGCAT TATTCATAAG CTCATCTGAA
ATATATTGAA CCATCAAGAT ACATTTAAAA TTACACATCG TTGCATGTAA GGAGATGAAA TCTGTAATGA TAGCTTAAAC
CTAACGATTT TACGTGCACA CTGTTAATCT AGTAGAATGT GCATGATAAA GAAAGTAAAG AGTTTTGTTT TCAATTAATC
ACAACTGTTG CAATTGTCAA ACATTTTGCA TGTCGGAACA CAATCACATA CTTCAATTTA TTATTAGCCG ATGAGATGAT
ACCTCAGAAC ATAATACGTT TATGTTAATC CTCATCTTCC GTGAAACCAT ATTTCACAGC CTTGTGTTTC TCTTTTTATT
TCTCGGAATC CAAATATTAT TACACGACAT TATGAAGATG AAGAGTAGGT GGCTTTTGGA ATAAAAAGTC GTTTTCTTCC
CAAGTAATTG TTTTTGGAAA TGGGATTAAG ATTAAGATTA AGAATATGAT TCCTGAAGAA AATTGCAGAG CACATTCAGT
TGCTACGGGA AAGCTTAGTA ACTTTACAAT CACCCATGGG AATGTTTTAT TGACAAAGTG ATTAAAACAT CTTTCGCTCA
CCTTTTTCTT ATCCGAGGCT ATTAAAACTG CGATTGTCAA ATTGGTGGTC TGGCTCCACC GAGCATGATC CTACGGGCAA
CTCAAACAAG GCAGTCTTTC AAGC

>Vigan.01G534100.01
ATGAGCACCT CAGCGGCTAT AGAACAATTT GACAAATGCA TGAATGGGCA AATAGAAGTT ATCGCACGGG TTTGGCATTT
ATTTCAAGCC TACAAAAAGG ACAAAAGTCC TTTCAAAATA GATGAGGGTC TGTATTTGGG TTCGATTGGC ACTGCAGTTA
ACAAAGCTTC TTTGAAAGAC CATAATATTA CTCACATTTT GACTGTGGCT GGTAGAATAC CACCTGCACA TCCTGATGAT
TTTGTCTATA AAATTATACA TGTTGTTGAC AAAGACGATG AAGACTTAAG ACAATACTTC AATGAGTGTT TTGATTTTAT
TGATGAAGCC AAAAGACTCG GTGGAGGTGT TTTGGTTCAC TGTTTCGCTG GAAGATCAAG GAGTGTGACT ATAGTTGTTG
CATATCTGAT GAGGACTCGT GGAATGAGCC TTTCTGAAGC TCTGCAACAT GTAAGGAGTA TACGACCAGA AGCACGTCCC
AATCAGGGTT TTATTTGTCA GCTGGAGGAC TTCGAAAAGT CTCTTCAAGG TGCCTCTAAG TCACTTTAG

>Vigan.01G534100.01
MSTSAAIEQF DKCMNGQIEV IARVWHLFQA YKKDKSPFKI DEGLYLGSIG TAVNKASLKD HNITHILTVA GRIPPAHPDD
FVYKIIHVVD KDDEDLRQYF NECFDFIDEA KRLGGGVLVH CFAGRSRSVT IVVAYLMRTR GMSLSEALQH VRSIRPEARP
NQGFICQLED FEKSLQGASK SL*