GBrowse Details

Vigan.01G509800.01

Basic Information:
Name: Vigan.01G509800.01
Multiple alignment
Variant Information
Position: Chr01:63764360..63768402 (- strand)
Length: 4043
Functional Information:
Description: Similar to Gibberellin 2-oxidase. [Q4W8C1, Phaseolus angularis]
GO: Biological Process: oxidation-reduction process (GO:0055114)
Molecular Function: oxidoreductase activity (GO:0016491)
Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors (GO:0016706)
InterPro: Oxoglutarate/iron-dependent dioxygenase (IPR005123)
Non-haem dioxygenase N-terminal domain (IPR026992)
Isopenicillin N synthase-like (IPR027443)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.22,1.09,0.12,1.68,1.01,0.77,0.06
Arabidopsis thaliana homolog: AT1G47990.1
Automatic updates:
Name: NM_001329828 NCBI(nuccore)
Organism: Vigna angularis
Description: Vigna angularis gibberellin 2-beta-dioxygenase 2 (LOC108338898), mRNA.
PubMed ID: 16116277 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:63764360..63765349 (- strand)
Length: 990
Type: three_prime_UTR
Position: Chr01:63765350..63765598 (- strand)
Length: 249
Type: CDS
Position: Chr01:63766146..63766500 (- strand)
Length: 355
Type: CDS
Position: Chr01:63767965..63768332 (- strand)
Length: 368
Type: CDS
Position: Chr01:63768333..63768402 (- strand)
Length: 70
Type: five_prime_UTR

>Vigan.01G509800.01 class=Sequence position=Chr01:63764360..63768402 (- strand)
TTCTTCTTCT CTTCTGTTTT CCCTCTGCAT TCTCTTCAGT CAGTAACAGA TATCTGCAAA ATCTAGAAAA ATGGTGTTGG
CTGCCCGAAA CCCAATGAAG AGCGAAGGGA TTCTCCCGAG AGAGGTTCCC GTGGTGGACT TCTCAGGGGA GAGAGCGGAA
GTGGCGAAGG TGATCGTGAA AGCGTGCGAA GAATACGGTT TCTTCAAAGT GATAAACCAC GGTATCAGCA AGGAAGTTAT
AGCGAAATCT GAAGAAGCAG GTTTCGGTTT CTTTGGGAAA CCGATGGTGG AAAAGAAAGT GGCGGTACCT GCATATGGGT
GCAAGAACAT AGGTGTCAAT GGAGACATGG GTGAGGTCGA GTACCTTCTC CTCAGTGCCA CCACTGACTC CATTGCTCAC
ATTTCCAAAA CCATATCCAC TGACCCATTA AATCTCAGGT ATCTCTATCT ATCTATCTAT CTTATGCATC ATGTCACCTC
TTATTTATAT TTACTGCATG CTTCCTTTAC TGTTAACTCC ACATGCTCCC TAACTACCAC CCTTTTTCAT ATCATATTTT
TCAACAATTC TTCTGCCAAT TATCTCAGAC AGATTCTCAC TTTGCTCATT TATGTTAATT ATCTCAAATG TTATGCATAT
TTATAGCTTA TATAAGAAAA GTTAATCAAA TTTAGCTGCA TGCTATACAC GAAATTATCA GAACAGATTA TTATACATGT
CGCACACAAC AATAATATTT TCGTTCAATA ACAACATGTA CACACGTTTA CATAATCCAG ACTTAGAATT AACAACTGGT
ACGTATATTT ACCTTTAACT TTAATATAAT AACAAAAATC TGTTTACACA TGCATCAGAT ATTAAATATA TGTATATATA
CACACAGAGG GTAAATTCAT CAGTTTATGC CATACACACC ATACCAACCA ACAATGTAGA AGTTGATTCG TTGTTCTTAG
AGTAAGGTCT GAAGCTTAAA TATCATTTGA TGAATACATA TGATTAAAAT AGAAGATCTT GCTAAAAATA GTAGTTAACT
TTTACTCAAT GTATATCATG TATTAATAAA TTTAAGAGCA CCGGTATATT GACACCCACA GGTGACGGTG ACAATAACAT
TCATGTCACA CGGTACTTTT CAATTTTTTC TCCAAGCTCT TTTTTTGATA ATAATATATG TGATAATTTG TGATTAATTC
GTTTTAAATA TAAGAACCAA TAAAACAGTC ACACATAATC TTTTATCAAA AAATTATAAA AAAAAATTAT TAAAATATCA
TGATCCATTT AAAAATATCA GTATCATTTA AATGTAAAAA GAAATATGCG TATCAAAGTA TTATTTTTGT AAATTTAATT
AATATAGTAT AGCAAAAAAT TGAAGCAGAC ACTGCAGCTT TCAATGAATA AGTATAACAG TATTATTTTT GTAAATTTAA
TATAGTATAG AAAAAAAATT GAAGCAGACA CTGTTACTAG CAGCGTTCAA TGAATGAGTA TAACGCTTTT GGAAGTACAT
TGGTGTGAGT TGTATCTGAC TGGCCAGTAA AGAAGGGAGA GAGAATAATG GTTTCAAAGT TTCCCCTTTG AACGAACAAG
TCCTAAAGTG AGTCAACCAA TAACCAGTAT TTGAAAAAAA TGACTGTTGC AACTCATTAT TCTGACATTA TGCTATACAA
CTTGAGCTTC TTCTTTTTTA TATGTATATA TAAAATGGAT ATTAACACTG TCTTGACGAT GGTATTCCCC TTAAGGAAGA
GAAAATTACA ATTTGATTCT TGGTAATTAA AAAATGATAT TTGTGTTCCT TATAAAACCT GGAGGTTGGT CATATAGAAT
AAAAAAAAAA AGAGAGATAT TTATATGTCT GTTTTGTGTG TGATTTGAAT AATGGGATGC AGGAAAAGCT TGAGTGCATA
CACAGAAGCA GTGAAAGAAC TAGCATGTGA GATATTGGAG GTGATGGCAG AGGGGCTGGG GGTCCCGGAC ACTTGGGTTT
TCAGCAGATT GATAAGGGAT GGTGAAAGTG ACTCAGTGCT GAGACTCAAT CACTACCCAC CTATAATTAA CAGAGATAAG
GACAAGTCAT CACAAATTAC CAAGGTTGGG TTTGGGGAGC ATTCTGACCC TCAGATCCTT ACCATTCTCC GATCCAACGA
CGTCGGAGGC CTCCAAATTT CTCTTCCAGA TGGGGTATGG ATCCCAGTCA CACCTGACCC CTCTGCATTC TATGTCAACG
TCGGTGATGT ACTACAGGTA TCTCTATGCA TGTAATATGC TTTGCTTCCT TTTTCACTCC ATCATATACA CTTTCTAATG
CATTAACATT AGTTGGGAAC ATGCTTATTT TTCCTCTTTC TCTTTCCTAC ATACTCAAAC ACATTATAAT GACTTGTATA
GAATAATAAC GTGAAAGGTT TAGTCTTTGA ACCCCACAGA AGAGAACAGA ACACAGAGGT TGATTCGATT TGCAAAGGAG
AAAAAAAACA GGGAGTGGGG GGCCTGGTTT GTATGCTGGC ACAGAAAGAG AAAAAAAAAT CTTAAAAGTT GATGGGAAGT
GAAGTGAGGT GAAATGACAT GGGAATCAAT GTATTTTTCT TTTTCTTTTC TTTTCACTGC AGCTTTTGAA CTAAATTTCA
GTGGGTCTGA ATCCATCTAC TAAAATATTT GGGGAACATT TGAATGAAAT TAATGACAAG TGTAAGAAAT GAATATGATA
TGAAGTAATG AAATGAGAAA TGAATGTTGG GAAAGTGGGG GTTGAAGTGT GATTGATTTA TGTGGGTGTT GGTGTTGTGT
TAAGGTTATG ACAAATGGAA GATTTGTGAG CGTGAGACAC AGGGCAATGA CGAACTCATA CAAGTGTAGA ATGTCAGTGG
CATATTTTGG GGCTCCACCT CTGCATCAAA CCATTGTTGC TCCCTCAGTT ATGGTGACAC CTCAGAGGCC CTCTCTCTTC
CGACCATTCA CTTGGGCCGA ATACAAGAAA GCCACATATT CTCTCAGGCT TGGAGACACA CGCCTTCAGC TTTTCAGAAA
CTGCAAACGC TGACCACCAC TCACTCTTTT CCTCTGCTTC CCCATTTTTT TCCATACTCT CCCCACTCAT TATTAACTTC
ACTACCCTAA GATAACTTCT CTGTACTCCT TTCCACCAAT CATCATAAAT TCCAATCCTT CAACTTTCTC TCTCTCTCTC
TCTCTTCTTT CCTTCTAACC AAAATTATAC ATCTCTTTCT TTTATTTATC TGCTATGCTA ACTTCAACTA CCCTATTTTT
TTAACGATAA CAAACATTTC CTTTTATATA TTAACATTTG ATTATAAAGT TCATTTTCAA TACTTCAAAA AATCTCCCTT
TTGACTACTT AGTCAATACC CCTGGAAAAA TAAAAGCAAG ACTCAATTGA ATTCAGTCCT AAAGTAAGAT TTCTTTCACT
AGATATATCA ATCCTTCAAT TAGCAAAGAT TTACAAAAGT ACTCTGGTGG TACAATAACC GGTTCTTATA GAACTAGTGT
GACTACTGTT CAAATATATG ATACACTGAT GCCACACATG GCATGGAGTG AGTTACCCCG CATAAATAAA TGATGCAATA
TAACTGTTAT ACTGTTATCC GTTGTCACCA AACAACATAA ATAGTTAACA TGCATAATCA ATTATTGCAA TACATTAGTT
CACCAAACAA TGGCACTCTA GTGGGAGAAT GTTGACGTTA AACAAGAAAC TGAGACCTTG AAGCAAAACG GGAACACTTT
CTTCTACCAG TTTTGCTTAG CATGCAGACA CAGTTCTGAA GAAGTTCAAA ATCCTCCTCC CAAAACAACA AGGATGCCTT
TTCTGGATTT TCTAGAAGCA TCTTTGAGGT CAAGAAACCA GCAATGGTCC ATGTCTGCAT CAACCGTGAT TGCTTCCCAA
TGAACCTTCC ATTTCGTGTG TCGTAATATT CGGGCCATTT ATCCAATGAA AGCCTTTTCC CTGCTGAATC AACAGCCTTC
TGTGCCAAGT CGGGCCTTCC CATCTTCATG CAGGCTAATG TGA

>Vigan.01G509800.01
TTCTTCTTCT CTTCTGTTTT CCCTCTGCAT TCTCTTCAGT CAGTAACAGA TATCTGCAAA ATCTAGAAAA ATGGTGTTGG
CTGCCCGAAA CCCAATGAAG AGCGAAGGGA TTCTCCCGAG AGAGGTTCCC GTGGTGGACT TCTCAGGGGA GAGAGCGGAA
GTGGCGAAGG TGATCGTGAA AGCGTGCGAA GAATACGGTT TCTTCAAAGT GATAAACCAC GGTATCAGCA AGGAAGTTAT
AGCGAAATCT GAAGAAGCAG GTTTCGGTTT CTTTGGGAAA CCGATGGTGG AAAAGAAAGT GGCGGTACCT GCATATGGGT
GCAAGAACAT AGGTGTCAAT GGAGACATGG GTGAGGTCGA GTACCTTCTC CTCAGTGCCA CCACTGACTC CATTGCTCAC
ATTTCCAAAA CCATATCCAC TGACCCATTA AATCTCAGGA AAAGCTTGAG TGCATACACA GAAGCAGTGA AAGAACTAGC
ATGTGAGATA TTGGAGGTGA TGGCAGAGGG GCTGGGGGTC CCGGACACTT GGGTTTTCAG CAGATTGATA AGGGATGGTG
AAAGTGACTC AGTGCTGAGA CTCAATCACT ACCCACCTAT AATTAACAGA GATAAGGACA AGTCATCACA AATTACCAAG
GTTGGGTTTG GGGAGCATTC TGACCCTCAG ATCCTTACCA TTCTCCGATC CAACGACGTC GGAGGCCTCC AAATTTCTCT
TCCAGATGGG GTATGGATCC CAGTCACACC TGACCCCTCT GCATTCTATG TCAACGTCGG TGATGTACTA CAGGTTATGA
CAAATGGAAG ATTTGTGAGC GTGAGACACA GGGCAATGAC GAACTCATAC AAGTGTAGAA TGTCAGTGGC ATATTTTGGG
GCTCCACCTC TGCATCAAAC CATTGTTGCT CCCTCAGTTA TGGTGACACC TCAGAGGCCC TCTCTCTTCC GACCATTCAC
TTGGGCCGAA TACAAGAAAG CCACATATTC TCTCAGGCTT GGAGACACAC GCCTTCAGCT TTTCAGAAAC TGCAAACGCT
GACCACCACT CACTCTTTTC CTCTGCTTCC CCATTTTTTT CCATACTCTC CCCACTCATT ATTAACTTCA CTACCCTAAG
ATAACTTCTC TGTACTCCTT TCCACCAATC ATCATAAATT CCAATCCTTC AACTTTCTCT CTCTCTCTCT CTCTTCTTTC
CTTCTAACCA AAATTATACA TCTCTTTCTT TTATTTATCT GCTATGCTAA CTTCAACTAC CCTATTTTTT TAACGATAAC
AAACATTTCC TTTTATATAT TAACATTTGA TTATAAAGTT CATTTTCAAT ACTTCAAAAA ATCTCCCTTT TGACTACTTA
GTCAATACCC CTGGAAAAAT AAAAGCAAGA CTCAATTGAA TTCAGTCCTA AAGTAAGATT TCTTTCACTA GATATATCAA
TCCTTCAATT AGCAAAGATT TACAAAAGTA CTCTGGTGGT ACAATAACCG GTTCTTATAG AACTAGTGTG ACTACTGTTC
AAATATATGA TACACTGATG CCACACATGG CATGGAGTGA GTTACCCCGC ATAAATAAAT GATGCAATAT AACTGTTATA
CTGTTATCCG TTGTCACCAA ACAACATAAA TAGTTAACAT GCATAATCAA TTATTGCAAT ACATTAGTTC ACCAAACAAT
GGCACTCTAG TGGGAGAATG TTGACGTTAA ACAAGAAACT GAGACCTTGA AGCAAAACGG GAACACTTTC TTCTACCAGT
TTTGCTTAGC ATGCAGACAC AGTTCTGAAG AAGTTCAAAA TCCTCCTCCC AAAACAACAA GGATGCCTTT TCTGGATTTT
CTAGAAGCAT CTTTGAGGTC AAGAAACCAG CAATGGTCCA TGTCTGCATC AACCGTGATT GCTTCCCAAT GAACCTTCCA
TTTCGTGTGT CGTAATATTC GGGCCATTTA TCCAATGAAA GCCTTTTCCC TGCTGAATCA ACAGCCTTCT GTGCCAAGTC
GGGCCTTCCC ATCTTCATGC AGGCTAATGT GA

>Vigan.01G509800.01
ATGGTGTTGG CTGCCCGAAA CCCAATGAAG AGCGAAGGGA TTCTCCCGAG AGAGGTTCCC GTGGTGGACT TCTCAGGGGA
GAGAGCGGAA GTGGCGAAGG TGATCGTGAA AGCGTGCGAA GAATACGGTT TCTTCAAAGT GATAAACCAC GGTATCAGCA
AGGAAGTTAT AGCGAAATCT GAAGAAGCAG GTTTCGGTTT CTTTGGGAAA CCGATGGTGG AAAAGAAAGT GGCGGTACCT
GCATATGGGT GCAAGAACAT AGGTGTCAAT GGAGACATGG GTGAGGTCGA GTACCTTCTC CTCAGTGCCA CCACTGACTC
CATTGCTCAC ATTTCCAAAA CCATATCCAC TGACCCATTA AATCTCAGGA AAAGCTTGAG TGCATACACA GAAGCAGTGA
AAGAACTAGC ATGTGAGATA TTGGAGGTGA TGGCAGAGGG GCTGGGGGTC CCGGACACTT GGGTTTTCAG CAGATTGATA
AGGGATGGTG AAAGTGACTC AGTGCTGAGA CTCAATCACT ACCCACCTAT AATTAACAGA GATAAGGACA AGTCATCACA
AATTACCAAG GTTGGGTTTG GGGAGCATTC TGACCCTCAG ATCCTTACCA TTCTCCGATC CAACGACGTC GGAGGCCTCC
AAATTTCTCT TCCAGATGGG GTATGGATCC CAGTCACACC TGACCCCTCT GCATTCTATG TCAACGTCGG TGATGTACTA
CAGGTTATGA CAAATGGAAG ATTTGTGAGC GTGAGACACA GGGCAATGAC GAACTCATAC AAGTGTAGAA TGTCAGTGGC
ATATTTTGGG GCTCCACCTC TGCATCAAAC CATTGTTGCT CCCTCAGTTA TGGTGACACC TCAGAGGCCC TCTCTCTTCC
GACCATTCAC TTGGGCCGAA TACAAGAAAG CCACATATTC TCTCAGGCTT GGAGACACAC GCCTTCAGCT TTTCAGAAAC
TGCAAACGCT GA

>Vigan.01G509800.01
MVLAARNPMK SEGILPREVP VVDFSGERAE VAKVIVKACE EYGFFKVINH GISKEVIAKS EEAGFGFFGK PMVEKKVAVP
AYGCKNIGVN GDMGEVEYLL LSATTDSIAH ISKTISTDPL NLRKSLSAYT EAVKELACEI LEVMAEGLGV PDTWVFSRLI
RDGESDSVLR LNHYPPIINR DKDKSSQITK VGFGEHSDPQ ILTILRSNDV GGLQISLPDG VWIPVTPDPS AFYVNVGDVL
QVMTNGRFVS VRHRAMTNSY KCRMSVAYFG APPLHQTIVA PSVMVTPQRP SLFRPFTWAE YKKATYSLRL GDTRLQLFRN
CKR*