GBrowse Details

Vigan.01G483200.01

Basic Information:
Name: Vigan.01G483200.01
Multiple alignment
Variant Information
Position: Chr01:61257113..61261493 (+ strand)
Length: 4381
Functional Information:
Description: Similar to Uncharacterized protein. [A0A059CK91, Eucalyptus grandis]
InterPro: Macrophage migration inhibitory factor (IPR001398)
Tautomerase/MIF superfamily (IPR014347)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:2.48,2.39,9.86,23.81,12.71,23.74,4.92,14.09
Arabidopsis thaliana homolog: AT5G57170.2
Automatic updates:
Name: NM_001251234 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306650 (LOC100306650), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:61257113..61257239 (+ strand)
Length: 127
Type: five_prime_UTR
Position: Chr01:61257240..61257350 (+ strand)
Length: 111
Type: CDS
Position: Chr01:61257648..61257848 (+ strand)
Length: 201
Type: CDS
Position: Chr01:61261087..61261122 (+ strand)
Length: 36
Type: CDS
Position: Chr01:61261123..61261493 (+ strand)
Length: 371
Type: three_prime_UTR

>Vigan.01G483200.01 class=Sequence position=Chr01:61257113..61261493 (+ strand)
GTTCGAAATT AGTTGGTGAT TGATATATAT ATATATATAT ATATATATAT ATACTGGAGT GAAGAAATGA TGTTCGTATC
AGAGAGATAA GTTATCCCAA AGCCACTCAC TGGTGCGTAT TGCAGCAATG CCTACTTTGA ATCTCTTCAC AAATGTGCCT
GTTGACACCG TCGTTGCTTC TGACATCCTC AGAGATGCCA CAAAAGCTGT TGCAAAGATC ATTGGAAAAC CCGAATCCGT
TAAGTCCGCT TCTATTCTCT ATTCTTTCCT TTTACACACT CTCTTTCAAC ACTGTTCACC ACTTGTTTGA TCAAATTACT
CTATAAAAAT ATCAAAACTT TACCTAACCC ATGCCATGAA ATTTATTAAT GGTACTATTT ACCTTGAAGA CTGGACAAAA
GTGCTGTCTG ATTTTCCTGT TTAGTTTTTC GGTAATTTGA TGTTCCACAG TTGAATAATT GTTTTGCTAC ATTATGTTTA
GTATCATTTG ACATGGCCTT TTGTGCCTTT TTTCGTATGC CGGATTGTAT TTCAGTATGT GATGATTTTG GTGAATGGGG
GAGTGCCCAT AGAATTTGCT GGAACTGAAG AGCCGGCTGC TTATGGAGAA TTGATCTCAA TTGGGGGCCT TGGTCCAAGT
GTAAATGGAA AATTGAGTTC TACCATTGCA GAAATTCTTC AAACTAAGCT TTACATTGAC AGTTCCCGAT TTTATATCAA
GTTTTATGAT GTTCAGGTAA ATTGCTGCTT TGTTCGATGT TGACATGTGT GATTCTGAGA ATATTGCTAA TTGATAATGG
TTACCACTGT TTGGTATTGT CTGGACTTTT GAAATATTTG TATGTGGTGT GAAGTGATTT CGTTCATCTA TCTTTTTTAA
TTCTCTGACA TAATATATTG AAGCTCTTTT GGTTCTTTAA ACATAGAGGT TTGTTTTGTA ACCATGCAAA TCTATAGAGA
TTCTTAGAAT GTTTGTTGGA GGAAGCAAAA ACTGGAATTG AATTAGTGCT GTTTTTCAGG GAACGCCATG CTAATAACAC
AACACAAGTT GTTTAAGTAG AAATTGATGT CGGATGTTGT TTAGCCATAT TTTGTCTGTA GTAAGTGTTT GCAGATTTAT
GTTTTCTGTT TTCGAGATTA GTGATTTATT TATGATTAAA TAAAAAATAA TCTGCTGACT GGTTCTTTAG GGAGAGAGGG
AGTTAAAATC TAGTTTTCAT CTTGTTAGGT AACCGCCCCA TGAATTTAGG TATAGTGGGG CAGTTTCTTT TCACATTTTT
CATTTATATT GATGTAATTA TTTCAATTCA AGAGATTTAC AGATTCAAGA GAAAACCTTA CCTTCATATG GGCTTGAATC
AGAAATTATT GTGAGTGCGT GAAGCACCTG GAGAGTTCTG CACAGGAAAA AAACTGGGTT GGGAGAGTGA TACACCAGTG
GGCTTTGAGT GTTTAGAGGT ATCATTTAGA AATGGCTGAA TCAATCAAAT ACGCTCAACC TGCCATTCCC AAATTTGATG
GACACTATAA TCATTGGGCA AAGCTGATGG AGAACTGCCT TCGTTTCAAG GAGTCTTGGT ACTTTGTGGA ACATGGGATT
GATGTTGTAC CAGACAAGGT GAATGCCTCA AAAATAGATA TCATAAGGAT GGAAGAACAA CAGCTTAAGG ATTTAAAGAT
AATAAATTAT CTCTATCAAG CAATTGACAG AAATTCTGGA CACCATTTTA AATGACAAGA CGTCTAAAAA TATATGGGAC
TTTATGAAGC AAAAATTCCA AGGTTCCACA AGGTCAAACG AGCACAACTA CAAGCCTTAC CCAAGGACTT TGAAACATTG
CAAATGAAGG AGGGAGAATC AGTAAATTCA TACTTTGCTT GGACTTTGAA GATAGCCAAA AGTATGAAAG CAGTTGGGGA
GAATATGCAA GAGAATGTCA CAACTACAAA ATTCCTGCCG TCTATGACAG CCGAGTTCAA CTGTGTGGTG TGCTCCATTC
AAGAATCCAA TAACATGGAC ACTATGACTA TAGACGAATT GCAAAGTAGT CTATTAGGTC ATGACTAGAG AATAGGAGCA
AGTTATGCAA ACTGTGGTTG ATGACCAAAC TCAAGGAAAA TGGAGAAATT GACAAATTTA AAGCAAGACT AGTAGCAAAA
GGCTATGCAC AACACTACGG AGTGGATTAC ATTGCACCAA TTACCAAGCT AGACACCATT CGTATAATAC TTTCAATGGC
TGCACAGAAT AACTTGATCA TATTTCAGTT GGATGTGAAA AGTGCATTTT TTCAAGGGAA GCGGAAGGAA GAAATATATG
TACAACAACC AGATGCATAT GTAAAGGGGC AAAAAGATAA AGTGTATAAG TTGAGAAAAG CACTCTATGG GCTCAAACAA
GCACATTGAG CATGGTACAA CAAAATAGAA GCATATTTCT TACACAATAG CTTTGAAAGG TGTTTTTTGT GAAGATACAT
TGTTTACAAA GTCAGCTAGG TGAGATAAAA TTCTAATTGT TAGTCTAAAG TGAATGATTT AATTTACACA GGAAATGATA
GAAGTATATG TAATGATTTT AAGAATTCCA TGATGTCGTT ATCTGATATG ACAGACTTAG GGAAGATGAG GTATTTTTTA
GGAATTGAAA TTCTATTAGA GTGCACATGG AATTTTCATA TGCCAAAGAA AGTATGCATT TGGTATGATG AAGTTTAATG
CAGTGAAAAA TCTGATTGTT TGAGGAACCA AATTGTCTGG AAATGATGCA GGAACTAAGG TAGATGCTAC TATTTTCAAG
CAAGTAGTTG GAAGCCTTAT ATATTTAACT GCAACTAGAC CTGACTTGAT GTATGGAGTT AGCTTGATTA GCATATTTAT
GGCTAACCCT TCAGAGACTC ACTGGTTTGC AGCCAAGCGA ATCTTAAGGT ACCTGAATTT GGAATATTCT ACAAGAAAGG
AGAAGACACA ACATTGGGGC TTTATACTAG TGATTTTGTT ATGATAGGAA AAGCACGTTA GGACTTGTAT TCTCATTAGG
GACTGGAGCA ATTTCATGGT CTTCCAAGAA GCCGCAAATA GTGATATTAT CCACACTAGA ATCATAATAC ATAGCTGCTA
CATCATGTGC ATGTCAATGC ATCTAGATCA TGAGAATTTT GGAGACTATT GGTTTTAAAG AACAGAAACA CATCTTGGTT
TTATGTGATA GTAATTCAGC TATTAAGTTA TTTGAAAATC TAGTATTTCA TGGCAGGAGT AAACATATTG ATGTTAGATT
CCATTTCTTA GGAGATCTTG TTAGAGAAGG AAGGATCAAG TTGAGCAACT GCAACACTCA AAATCGAGTA GTTGAAATTG
GAGCAATTTG TGAATATCAG AAGTATGTTG GACATGGCTG AAGCATCATA AATAAACTAA AAGCTTTCCT AAGCCTTTAG
TTTAAGGGAG GGTTTGTTAG CAAATTTATG TTCTGTTTTT TAGATTAGTG GTTTATTTAT GATTAAAAAA AAAAAACAGG
TGATCTGCTG ACCGATTCTT TAGGGAGAGA GGGAACTGAA ATCTAGTTCT CATCTTGTTA GGTAACCGCC CCATGAATTT
AGGCATAGTA GGACAGTTTC TTTTCGCATT TTTTTCATTT ATATTGATAT AATTCATTTC AATTCAATAA CGCAGAGAGA
TTTATAGATT CAAGGGAAAA CCTTGCCCAT TTGTGTGCAC AATAGGTATG CTACGACAAA AAAAAAGATC TGTGTTAACT
TTATCATGTC CTAATATGCT CCTCTATTCC TTGTATTGTT TTGTCTCGTA AAGAAGTTAT TTCTATCTCG TTTTTTTTTT
CCGTTGTTTT GAACTTGCTG AAGCACATTT ATGAGTCAAG AAATAGCTTC CCGTCGATAC CATGAATATC ATACATAGTC
TCAACTTTTA TGTTCATTAC TTCCTATCCT CATTATATTC GTTTTCTGAT GCAGCGCTCA TTCTTTGGGT TCAATGGCTC
AACCTTTTGA TTTAACTTTC TTTCTAGGCG CATATATTTG TGGAGTTTCA CGGGGAAAAA ATCATCTTCC TTTGGATTAT
TGTAATTCTG TATGCATGTT TGTATTAATG AATACAGTAG TTTATTAAAA GGGAAAAAGC GTCTTCCTTT GTTCCCCATT
TTTATGCTTT AGCGATTCAT GCCTGCAATT TATTTATCTT CATGTTGGCT CTGAATCTTA ATGAGCTTCA TAAACCATAT
AGTGGTTAAC GGAAACGGAT TCCACTGTTG CCAATATTGT GAGTGTAGCT TTGCTGCATT TTGTCGGAAA TGTTAACAAC
TCTAACCATG TCAAGAAGAA AATTGCAGTG AATACACTCT TGACATTTTC TCTTCTGCGT T

>Vigan.01G483200.01
GTTCGAAATT AGTTGGTGAT TGATATATAT ATATATATAT ATATATATAT ATACTGGAGT GAAGAAATGA TGTTCGTATC
AGAGAGATAA GTTATCCCAA AGCCACTCAC TGGTGCGTAT TGCAGCAATG CCTACTTTGA ATCTCTTCAC AAATGTGCCT
GTTGACACCG TCGTTGCTTC TGACATCCTC AGAGATGCCA CAAAAGCTGT TGCAAAGATC ATTGGAAAAC CCGAATCCTA
TGTGATGATT TTGGTGAATG GGGGAGTGCC CATAGAATTT GCTGGAACTG AAGAGCCGGC TGCTTATGGA GAATTGATCT
CAATTGGGGG CCTTGGTCCA AGTGTAAATG GAAAATTGAG TTCTACCATT GCAGAAATTC TTCAAACTAA GCTTTACATT
GACAGTTCCC GATTTTATAT CAAGTTTTAT GATGTTCAGC GCTCATTCTT TGGGTTCAAT GGCTCAACCT TTTGATTTAA
CTTTCTTTCT AGGCGCATAT ATTTGTGGAG TTTCACGGGG AAAAAATCAT CTTCCTTTGG ATTATTGTAA TTCTGTATGC
ATGTTTGTAT TAATGAATAC AGTAGTTTAT TAAAAGGGAA AAAGCGTCTT CCTTTGTTCC CCATTTTTAT GCTTTAGCGA
TTCATGCCTG CAATTTATTT ATCTTCATGT TGGCTCTGAA TCTTAATGAG CTTCATAAAC CATATAGTGG TTAACGGAAA
CGGATTCCAC TGTTGCCAAT ATTGTGAGTG TAGCTTTGCT GCATTTTGTC GGAAATGTTA ACAACTCTAA CCATGTCAAG
AAGAAAATTG CAGTGAATAC ACTCTTGACA TTTTCTCTTC TGCGTT

>Vigan.01G483200.01
ATGCCTACTT TGAATCTCTT CACAAATGTG CCTGTTGACA CCGTCGTTGC TTCTGACATC CTCAGAGATG CCACAAAAGC
TGTTGCAAAG ATCATTGGAA AACCCGAATC CTATGTGATG ATTTTGGTGA ATGGGGGAGT GCCCATAGAA TTTGCTGGAA
CTGAAGAGCC GGCTGCTTAT GGAGAATTGA TCTCAATTGG GGGCCTTGGT CCAAGTGTAA ATGGAAAATT GAGTTCTACC
ATTGCAGAAA TTCTTCAAAC TAAGCTTTAC ATTGACAGTT CCCGATTTTA TATCAAGTTT TATGATGTTC AGCGCTCATT
CTTTGGGTTC AATGGCTCAA CCTTTTGA

>Vigan.01G483200.01
MPTLNLFTNV PVDTVVASDI LRDATKAVAK IIGKPESYVM ILVNGGVPIE FAGTEEPAAY GELISIGGLG PSVNGKLSST
IAEILQTKLY IDSSRFYIKF YDVQRSFFGF NGSTF*