GBrowse Details

Vigan.01G481300.01

Basic Information:
Name: Vigan.01G481300.01
Multiple alignment
Variant Information
Position: Chr01:61025622..61028691 (+ strand)
Length: 3070
Functional Information:
Description: Similar to Uncharacterized protein. [I1MSN5, Glycine max]
GO: Biological Process: metabolic process (GO:0008152)
Molecular Function: methyltransferase activity (GO:0008168)
InterPro: Methyltransferase type 11 (IPR013216)
Uncharacterised protein family, methyltransferase, Williams-Beuren syndrome (IPR022238)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:29.60,39.71,10.11,16.27,18.40,18.27,11.25,14.53
Arabidopsis thaliana homolog: AT5G57280.1
Automatic updates:
Name: NM_001254253 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100801198 (LOC100801198), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:61025622..61025684 (+ strand)
Length: 63
Type: five_prime_UTR
Position: Chr01:61025685..61025783 (+ strand)
Length: 99
Type: CDS
Position: Chr01:61025886..61025961 (+ strand)
Length: 76
Type: CDS
Position: Chr01:61026042..61026125 (+ strand)
Length: 84
Type: CDS
Position: Chr01:61026242..61026297 (+ strand)
Length: 56
Type: CDS
Position: Chr01:61026435..61026491 (+ strand)
Length: 57
Type: CDS
Position: Chr01:61026801..61026850 (+ strand)
Length: 50
Type: CDS
Position: Chr01:61027044..61027196 (+ strand)
Length: 153
Type: CDS
Position: Chr01:61028059..61028191 (+ strand)
Length: 133
Type: CDS
Position: Chr01:61028279..61028446 (+ strand)
Length: 168
Type: CDS
Position: Chr01:61028447..61028691 (+ strand)
Length: 245
Type: three_prime_UTR

>Vigan.01G481300.01 class=Sequence position=Chr01:61025622..61028691 (+ strand)
TGAATACATA ATAATGGAGT AGTGGTGGTG TGTGGGTTTT AGGGTTTTTG GAGTTGTGAA AGAATGGCGT CCAGACCAGA
GGTGATTGCG CCGCCGGAGT TATTCTACGA CGATTCCGAA GCTCGAAAGT ATACCTCTTC TTCCCGAATT GTTCAAATTC
AGGTTTTTTC CTTTCTTCTC CTTCTTCTCC TTCTTCTCAT CCTCAATTGT AGTTGATTTT CTCTTTTTAT GAAATTTATT
TGTTAATTTA TCTGTGCCAA AAAGGCAACG TTGTCAGAGA GAGCCCTTGA ATTACTTGCT TTACCTGATG ATGGCATTCC
AAAATTACTC CTTGATATAG GTAATTTAAT CTTATTTAAT TTAATTCAAT TTGATTATTC TCTGGGGTTT TTGTCAAAGT
TTTATGATTT GTGAATGTAG GTTGCGGTTC GGGACTTAGC GGCGAGACAC TCACGGAGAA TGGACACCAT TGGATAGGGC
TTGACATTTC AGCATCGATG CTTAGTATGT TATGTTTGTT CTTCCTTTAT TTTTTTCTTT AAATATTATT TTTTTGATCC
TATATGTTTT GCATTTTTGT TATTTTTTTG ATAATTTTAT TAATTATATT AAACCGGTAG ATGTTGCGGT GGAGCGGGAG
GTTGAGGGTG ACCTTTTACT TGGTGACATG GGTCAGGTAT GATAATTGTT TCTTTTTTTT TTCTTACATT TTTTCCGTGT
ATGTATTCCT TCATGATGCT TGTTTGCTGC AATATGATGC ATGCCTGCTT CTCACTTTAC ATGTTTTTTT TTCGTCCGTG
TATTTGGTTT CAGGGTTTAG GGGTTCGTCC TGGAGTCGTT GACGGGGCCA TCAGTATATC TGCTGTTCAG GTGTGCTCTA
AAAAAATGAA TAATTCAAAC TAAAATTATG TGGAAATTCA AGACCTTTCT AGTTTGGGCC GAGCTTTTAC TGGGTGAAGG
AGATCATACT CTGTTATAAC TTATGATATA TGAAATCTAC AGTTATATAT TTTGAATGCC TGGATCATGC ATTTTCATTT
TTATTTTTTT GGGGTAAGGC CTACTTTTAT TTGAATAGGT ACTACTTCTC TAAAAAGTTT AATTGGGCGG AGCATTTTAT
TTCATTCTTA ATCCTGTGGA TATTTGTATG ACAATGCAAA CTTTGATATG ATAATGCAGT GGTTATGCAA TGCTGATAAG
TCCTCTCACA ACCCTCGATT AAGATTGAAG TATGTACCTT TACTTGTTCA TTGTGCTGCT TTTCATTATT CTAATCTTTT
GTATTTTGGC TTCTCAAGCT AAGCATACAG TGAATTGGAG TTCCATTTTC TTTGAATCTC ACTACAGAGA GATTCAATTA
TTCTGGAACC TATCTCCTTT TCCCTGTTCT AATAATATAT AATCTCATTT TTTTTTGTGC AGGGCATTTT TTACATCTTT
ATATAAATGC TTATCCAATG GAGCCAGAGC AGTGTTTCAA GTATATCCTG AAAATATAGA CCAGCGTGAA TTGATTTTAA
ATGCTGCAAT GCATGCTGGA TTTGCTGGTG GCATAGTGGT GGATTTTCCA CACAGGTACG AAGAAACATA CGGCTGTGTG
AATTTGTTTC ATAAAAGAAT GTGTTGGAAA ATTATTCTAT ATATTATAGT GTTTTACAAG TCAGCACAAA TTTTAACTTG
TTTTCTTGGG TTTGGTAAGT GCTATAATTA TTGTTTCTGG TAATTGTAGT CATGTTACAC TCGAATCTGT TGAAATATAT
TTGACCTTAT ACTGTGAAAA AGTAGAAGAA GCTCAACTTA TATTCCTTTC CCTTGTTCTA TTGTCTCTCC TTGTTTTAGG
GTTTAGGGGT TTAGCATTAC CTTGTGAGAA TCAGCTGAAA TTTATTGCAT ATCTTAAAAT GAACCATCTT AAGCTGTATA
CATTAAAATA TATTCGATCC CTGATTGGGG TTGGAGCCAT GGAATATTTA TTGAAGTGGC CAAATTATAA GATCAATGCA
AGTCTCCAAA ATAATGAATA CATAACAATA TCAAAGAAAA GTTAAGTTTG TCAACGTTTC CAATATCAAA AAGAAATTTC
GATAGACAAT CACATTTATC TTGGCTTATT AAAAGAAATC GTTTCCCCTA GCCATAATGT GGCTCCATCA CTGGCCTCTA
TCATATGCTA TAGACAAAGT TGGGGGAAGG ATGAACAGAA ATGTGTAATA TATCTGAACA CACATTAGTG CATAGTTGAA
TCTCTCCTTG CTTTATATAG TTATAGATTT ATTACCAATT ATATACACTC CTAGAGAAAA ACGGTCATGC TTGATTACGA
GGTGTACTGT CTTGTTTGAT TTGTTTTCTA GAAGCTATGT TTCTTTTTTA AAGAATCATT ACCTAGCCTT CTTGAGCATG
GTGTTTCACT AATTGGAGAA CATCTGACTT ATGGTAGTTC TAAGAGGAGA AAAGAGTTCC TTGTTCTCAC GTGTGGTCAA
CGTTCAGTAA ATTCATCCGT GGCCAAAGGT AAAAATGAAG ATGGGGAGAG TTGCTCTGAC GAGGACAGTG AGGATGAAGA
AAATCAGACA GTGAGTATTA CCATATTTAT TATTGCTTGA GTATTATCCT TATGAGTGGA TTTATTACTT ATTAATAAAA
AAACAAAACA ACATCAGGTA TGCATCTCAG ATAGGCATAG ACCGCGGAAG AAACAGAAAA AGAACAATAA GAGTGGGAAG
GGAAAGGAAT GGATACTAAG GAAGAAGGAG CAGATGAGAA GAAGAGGAAA TGCCGTCCCT CAGGATAGCA AGTACACAGG
TCGGAAAAGG AAGGACAGAT TTTGATCTTG TCTGGCATTT GCCTCTGTAC CAAGTCTTTT TTCGATGGAG AGCCTTAAAG
GATATTTATG AAGAATGTCC GAATATCAAT TTTGTTTTTT TTTTTGTGGT TCTTGTGCAA TTTAGGATTA TGATTTTGTA
TTTGTTTTTA ATTATAAAAA CAGGTAAATA TCATTGTCTC ATTAGTTGTT TGTATTATTT GGCAACCGTA TGCATTTAAT
TGTTGATGCT CACAATTCCA GAGTACAACT 

>Vigan.01G481300.01
TGAATACATA ATAATGGAGT AGTGGTGGTG TGTGGGTTTT AGGGTTTTTG GAGTTGTGAA AGAATGGCGT CCAGACCAGA
GGTGATTGCG CCGCCGGAGT TATTCTACGA CGATTCCGAA GCTCGAAAGT ATACCTCTTC TTCCCGAATT GTTCAAATTC
AGGCAACGTT GTCAGAGAGA GCCCTTGAAT TACTTGCTTT ACCTGATGAT GGCATTCCAA AATTACTCCT TGATATAGGT
TGCGGTTCGG GACTTAGCGG CGAGACACTC ACGGAGAATG GACACCATTG GATAGGGCTT GACATTTCAG CATCGATGCT
TAATGTTGCG GTGGAGCGGG AGGTTGAGGG TGACCTTTTA CTTGGTGACA TGGGTCAGGG TTTAGGGGTT CGTCCTGGAG
TCGTTGACGG GGCCATCAGT ATATCTGCTG TTCAGTGGTT ATGCAATGCT GATAAGTCCT CTCACAACCC TCGATTAAGA
TTGAAGGCAT TTTTTACATC TTTATATAAA TGCTTATCCA ATGGAGCCAG AGCAGTGTTT CAAGTATATC CTGAAAATAT
AGACCAGCGT GAATTGATTT TAAATGCTGC AATGCATGCT GGATTTGCTG GTGGCATAGT GGTGGATTTT CCACACAGTT
CTAAGAGGAG AAAAGAGTTC CTTGTTCTCA CGTGTGGTCA ACGTTCAGTA AATTCATCCG TGGCCAAAGG TAAAAATGAA
GATGGGGAGA GTTGCTCTGA CGAGGACAGT GAGGATGAAG AAAATCAGAC AGTATGCATC TCAGATAGGC ATAGACCGCG
GAAGAAACAG AAAAAGAACA ATAAGAGTGG GAAGGGAAAG GAATGGATAC TAAGGAAGAA GGAGCAGATG AGAAGAAGAG
GAAATGCCGT CCCTCAGGAT AGCAAGTACA CAGGTCGGAA AAGGAAGGAC AGATTTTGAT CTTGTCTGGC ATTTGCCTCT
GTACCAAGTC TTTTTTCGAT GGAGAGCCTT AAAGGATATT TATGAAGAAT GTCCGAATAT CAATTTTGTT TTTTTTTTTG
TGGTTCTTGT GCAATTTAGG ATTATGATTT TGTATTTGTT TTTAATTATA AAAACAGGTA AATATCATTG TCTCATTAGT
TGTTTGTATT ATTTGGCAAC CGTATGCATT TAATTGTTGA TGCTCACAAT TCCAGAGTAC AACT

>Vigan.01G481300.01
ATGGCGTCCA GACCAGAGGT GATTGCGCCG CCGGAGTTAT TCTACGACGA TTCCGAAGCT CGAAAGTATA CCTCTTCTTC
CCGAATTGTT CAAATTCAGG CAACGTTGTC AGAGAGAGCC CTTGAATTAC TTGCTTTACC TGATGATGGC ATTCCAAAAT
TACTCCTTGA TATAGGTTGC GGTTCGGGAC TTAGCGGCGA GACACTCACG GAGAATGGAC ACCATTGGAT AGGGCTTGAC
ATTTCAGCAT CGATGCTTAA TGTTGCGGTG GAGCGGGAGG TTGAGGGTGA CCTTTTACTT GGTGACATGG GTCAGGGTTT
AGGGGTTCGT CCTGGAGTCG TTGACGGGGC CATCAGTATA TCTGCTGTTC AGTGGTTATG CAATGCTGAT AAGTCCTCTC
ACAACCCTCG ATTAAGATTG AAGGCATTTT TTACATCTTT ATATAAATGC TTATCCAATG GAGCCAGAGC AGTGTTTCAA
GTATATCCTG AAAATATAGA CCAGCGTGAA TTGATTTTAA ATGCTGCAAT GCATGCTGGA TTTGCTGGTG GCATAGTGGT
GGATTTTCCA CACAGTTCTA AGAGGAGAAA AGAGTTCCTT GTTCTCACGT GTGGTCAACG TTCAGTAAAT TCATCCGTGG
CCAAAGGTAA AAATGAAGAT GGGGAGAGTT GCTCTGACGA GGACAGTGAG GATGAAGAAA ATCAGACAGT ATGCATCTCA
GATAGGCATA GACCGCGGAA GAAACAGAAA AAGAACAATA AGAGTGGGAA GGGAAAGGAA TGGATACTAA GGAAGAAGGA
GCAGATGAGA AGAAGAGGAA ATGCCGTCCC TCAGGATAGC AAGTACACAG GTCGGAAAAG GAAGGACAGA TTTTGA

>Vigan.01G481300.01
MASRPEVIAP PELFYDDSEA RKYTSSSRIV QIQATLSERA LELLALPDDG IPKLLLDIGC GSGLSGETLT ENGHHWIGLD
ISASMLNVAV EREVEGDLLL GDMGQGLGVR PGVVDGAISI SAVQWLCNAD KSSHNPRLRL KAFFTSLYKC LSNGARAVFQ
VYPENIDQRE LILNAAMHAG FAGGIVVDFP HSSKRRKEFL VLTCGQRSVN SSVAKGKNED GESCSDEDSE DEENQTVCIS
DRHRPRKKQK KNNKSGKGKE WILRKKEQMR RRGNAVPQDS KYTGRKRKDR F*