GBrowse Details

Vigan.01G480000.01

Basic Information:
Name: Vigan.01G480000.01
Multiple alignment
Variant Information
Position: Chr01:60898487..60902888 (- strand)
Length: 4402
Functional Information:
Description: Similar to Uncharacterized protein. [V4U164, Citrus clementina.]
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:4.98,13.09,17.78,29.90,41.12,16.95,25.12,21.31
Arabidopsis thaliana homolog: AT2G18910.1
Automatic updates:
Name: NM_001249695 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max uncharacterized LOC100306552 (LOC100306552), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:60898487..60898611 (- strand)
Length: 125
Type: three_prime_UTR
Position: Chr01:60898612..60898665 (- strand)
Length: 54
Type: CDS
Position: Chr01:60901498..60901595 (- strand)
Length: 98
Type: CDS
Position: Chr01:60902527..60902761 (- strand)
Length: 235
Type: CDS
Position: Chr01:60902762..60902888 (- strand)
Length: 127
Type: five_prime_UTR

>Vigan.01G480000.01 class=Sequence position=Chr01:60898487..60902888 (- strand)
AAAAGAATGA AAAAAAAAAA AGAACTTGTG AAGTACAACT AAGATAGGAA GACAAGAGAT CCAACATATC ACACACAACA
CTCCCTCTTT CAACTAACAT TACTTCCACA CTCTCTCTCC GACCAAAATG CCGATTAACG CGGAATCTAC GCCGCCGCCG
GTCATCGGAA AAATCGGTCC TTACACTGTT TTCATGACGC CGCCGTCGAC ACCAAAACCC TCCGAAGACC CCTCTACCGC
CACCAAGATC GCCCCTCCGC CGCCTCAGAT TCCTAAAACC GTTCCTTCCC CCAAACCCGT GTCCGGTTCC GACGATTCCC
TTTTTGGCAT CTTCAGAAAT GCCGTTACCA AGGTTCAAAC CGGTACGTAC TTTACTCTTT TCAGCTCTTA TGTTAGGTTA
GATTCTGTGT CGACGAAAAC ACAATGTGTC AAACATTTAT AAAATAAAAA ATTAAAATTA TAAGTAAGGC CTAAAGTTGG
TAAGTTAAAG CTGTTTTTGG GTTATTTGGA ATTTGAATTG AGTTGTTTAA AAGAGTGTGA CTGTTGTGAA CATTTATTTT
TGGTAAATGG TTTAATCATA ATTCCATCTA CTTTTAGAAA CACCTTGATT TGATACCAGA AATATATATT ATGCGTGCGA
CTCCAGAGTT ATTCTAATGT ATGACCTAGT CTTGTGGGAA TCTTTTTGGG TCTTGGCATT CTTGTTGGTG TTTTGTTTAC
TATTTTGGAC AAAACACATC TTCTTCTTCT TTTGTTCAGT TTTGTTAAGA CTCCTACCAA ATACCGCCTG GAAGTTTGGT
GTTTCTTTAC AAAACGTGTA TTGTTTGGGG GGTAAGAAAA CTGGAGTATT TGGTGACTTG GTTACATAGT GATTGGAGAT
AACCGTGGGT GGGTCCTTTG TTTTGCATTT CTCTGGTTTG CTGAAGTGAA AACAAACATG CCATGGATTA AGTAATTTCA
AGAACGGCCA TGGCAGTGGA AACTGTGGCT GAGCATTTTA TGGTAACTCT GCAAATGATG TTTTCCTTAT TCTAGTAAAA
GAAGTAAATG GCTCTAACTG GTTGTGCCTA TTTGTGTATT GCTTTTCAGT ATGGTTGGTG TAGTGCACTC TCTATTTATA
ATGTTATTTT TCATTGCATA AAAATGTATG AATCAACATG TATTTCCCTC CTTTTTTATT TTGATTTCAG ATCCTATAAT
ACAATAGGTC TTTGATTGAG GCTTTTCCTT GTCTTGTTTA TTCTGAGAAC CGCTACTATT ATCTTACAAT ACCCATGGAC
TTTCCTTTTA CAGCTCACTC AAGTTTGGAT GACCATGTGG CACGTTGGTT TGGATTAAAT CAGTCAAAAT ATCAGTGGGC
TCTTGATGAT TATTATGAGA GCAAGGGAAT GGTAAGCAAT TGCGTGGTAC TAATATTTGC AAGATCAGTG TCTGTGTCCT
TTTATAATTG GATATTCTTT TTCTTGTTTT TGATGTGGCT CCCTTTGGTT GTTTAATTTA GATCATTGTT ACCACCAAAT
TTGGTGGTTT CATCTGAGAA CCCCAAATTG GTTCATGGCT GCCTATTCAC GGTTCATTTG TGAATTGGGT TTTTCTAATT
TGCAATTTGA TACATTAAAC ATGTTGAGCC AAAGTTGAGG CAGAGGATGT AGGGTGGTGG AGCCTCCAAT GGAGACTTTG
GGTTTGGAAT TTGCTAGTTT GACTTTTGGG GTGGATGGAA AACACCGATG TGGAAGGATG AGAAGGAGAA AGAATAGGAG
AAGATGTATC TTGTGACCAG GACCCCATGT CCTGTAAAGC TGAATTTCAC CTACTAAATG GACGAGGTAG CGAGATGAGG
AGAGTGGAAA TGTACTGTAC TGTCTCTCAA TAACTGCGAT GATTCCATTT GCCTTATAAA AAGAAATGTG ATGACTCCAC
TCCAGAGTTT CCTAGGGAGA CTAAATGGGG CTGTAGTTGA AATAATAAAC GGTAAAAATT GTAAAACTGT TATAAATGGT
TAATTACTCC TCAATTGAAT TGTTCGTGAG TTTATCAGTC GAAAGGATTT CACTTTTTCT AAAAAAAAAG TGTTATACTA
ATAACTAAAG TAAATCATGA ATAAGTTTAT GTTATGTAAT TATGATTGAT AAAATAAATA GGTTTAATAG GTTCGGAGGT
ACCTATATTT GTGGGTTCGT TTCAATTGGG TCCTCCAATT TTGAAAGTGA TCAATTTGGT CCCTAATTTA ACAAAATTGA
GTCAATAATA CCCTTTCCGT TAAATGCAAT GGAAGTCATT AACTTTTTAA ACATCTGGTA TGTTGAAGCA TCCTTCAAAT
AAAACTGTGC CACCTGCAAA TAAAAGGATG CCTCAACATG CCACATGTTT AAAAAGTTAA CACCGTCGAT TATATTTAAC
GGAAAGGGTA TTATTGACTC AATTTTTTTA AATTAGGGAT CAAATTGATC ACTTTCAAAA TTGGAGGACC CAATTGAAAC
GAACCCACAA ATATAAGGAC CTCCGAACCT ATTAAACCAA ATAAATATTA CATTACCTTA TGTAAGTATA AAATTGTTGA
AAAGCCAAAT GTACGAACTA AGTGTATCCC CCACATGTCA TATATTTGAC ATAGTAGCTT GCTGCATACC AGATACCTGA
CCTGGTACCT GTACCCACAC TGAAGAGTAT TGTGTATCAG GTAATTATGA TTTGACCTGT TATGTTGATA TGCTAACATC
ACTTGTTTTA AGACTTCTGA TATGCTAATA TACTAGTTGG ACTTTTATTT CAACAAGAAC CTTTTTCTTG TTGGACTTCT
GATATATCCA GTAGATATGG ACAGGGGTTA GTTAGTTTTA TGTTATGTCC TGGTAATGTG CCATTTACCT CGCTTTTAAA
CTATTTATAA GCATCAGCAA TGCTTGAATA GTTGTACTTG TACAATCTTT TTTCAGGAAG TCTGTTTAAT CTTAAAAGTA
TAAGTTCCTC GTTGCGTGCG GTAAAAAATA AATTTCAAAC AACTATTAAA GTTGGATATT GTTAAGTTGT GTTTGAGCAT
CGGAGAGCAT CAGTATTATA GGTGCTGTGC TGCATTGACT TGCTAGTAAG AGGGATTATT ATGCAAGGTT TTTAATGGAG
TCGCATGAGA CTTAATCTTA CAGGCGGCCT ATGTTCTTTG TTTTCGATTT TGAGTTGAAG TTTTAAGATG TTGCGTGTGG
TTTCAATATT TAGGGATGAT TGCTATTTAT CATATCATGG ATTTCGTACT CCGCTATGAT ACTTAATGTA GAAAACATTT
AGAAGGGTCT TTGGTTTGAG TTTGTCAAAG ATAAAAGGCA TTTAACAGAA TTAAGTCTGC CTTTTGGCAG CATATTTTTT
GTGAGTTAAT GTAGAATCTA CTGTCAAAGC TAAAATAGAC ATGTTAACTA AAGACCTTTT TGTGCCTATT TAGCAAACCA
CCAAAATAAT TTCCTCCCAC TATGACACAT GTTTCAATAT AATGTATCTG GCTGAAATTT ATGTGGACGC GTCCAAATTA
CGTTTAACAG TACAATAGTA ATTGTGTCAA AAATCAATTA TACTCAACTT AAAAACGCGT GGTGCCATCT CTGGTTCTTT
GCGATTGAGT AGTAAGTATT TTCATACCAT TTTATTTTGC TAATTGATCT ATGATTTAAT CTCGTGAAAG TTAGGAGGAA
GTGTCCAGTT TCAGTTTTAA CAACCAAAAT TGATACTTAG GGAAGTACAA TTTGGAGTCC GGTGAAAAGT GTCCTGAGAA
AAGAAGAGGT TGAGAGAGAT AATGGACCCC TTCTGTGTTA CTTCTCTCAA TGTAAAGGCC CTTTATGCCA CAATTTTACT
ATGGATTCTG TTATAGACTT TTTACGTGGA TTTCCTTCAT CTCTAAATGT ATGAACTAGT CAATATGCCT TACAATGCAA
TATGCTATGG TGTTGTATAA TTATGGAAAA CAATCTGGGA GTTTGACCTT TCTGATTGGG AGTATGGTGC CTTTTCATTC
TGAGGAATGA GCATTTTTAT TTTAATTCTA AATAAATTTA TTGTTATCCA GTGCCAATGA TCACTCCCTC TTTGTAAGCA
AACACAAGAT TTTCTGATAC ATTTTCATTA TATACGATAT GGCTCCTTGT TTCAATAGCA TAAGTGAATT CTCATCTGAC
CTGCACAATA AGCAATGTGA GTTTCTTTTT CTCACTTCTA ACAAATAGAG ATTTTGACTG TAGGAAAAAG GAGACATCAA
AATGAAAGAG GTATCGAGCA AACTACAGAA TGTCTGACAT GCCTAGAGTC GGTGGTAAGA AGGACTATCT TAATTTGGCA
ATTTATTTAT CCTTGAATTG TATGCATAAT TCCTTTTAAC TTGATGATTC GTATCATTAT GCAGGATTAT TTCAAAGTGA
GG

>Vigan.01G480000.01
AAAAGAATGA AAAAAAAAAA AGAACTTGTG AAGTACAACT AAGATAGGAA GACAAGAGAT CCAACATATC ACACACAACA
CTCCCTCTTT CAACTAACAT TACTTCCACA CTCTCTCTCC GACCAAAATG CCGATTAACG CGGAATCTAC GCCGCCGCCG
GTCATCGGAA AAATCGGTCC TTACACTGTT TTCATGACGC CGCCGTCGAC ACCAAAACCC TCCGAAGACC CCTCTACCGC
CACCAAGATC GCCCCTCCGC CGCCTCAGAT TCCTAAAACC GTTCCTTCCC CCAAACCCGT GTCCGGTTCC GACGATTCCC
TTTTTGGCAT CTTCAGAAAT GCCGTTACCA AGGTTCAAAC CGCTCACTCA AGTTTGGATG ACCATGTGGC ACGTTGGTTT
GGATTAAATC AGTCAAAATA TCAGTGGGCT CTTGATGATT ATTATGAGAG CAAGGGAATG GAAAAAGGAG ACATCAAAAT
GAAAGAGGTA TCGAGCAAAC TACAGAATGT CTGACATGCC TAGAGTCGGT GGTAAGAAGG ACTATCTTAA TTTGGCAATT
TATTTATCCT TGAATTGTAT GCATAATTCC TTTTAACTTG ATGATTCGTA TCATTATGCA GGATTATTTC AAAGTGAGG

>Vigan.01G480000.01
ATGCCGATTA ACGCGGAATC TACGCCGCCG CCGGTCATCG GAAAAATCGG TCCTTACACT GTTTTCATGA CGCCGCCGTC
GACACCAAAA CCCTCCGAAG ACCCCTCTAC CGCCACCAAG ATCGCCCCTC CGCCGCCTCA GATTCCTAAA ACCGTTCCTT
CCCCCAAACC CGTGTCCGGT TCCGACGATT CCCTTTTTGG CATCTTCAGA AATGCCGTTA CCAAGGTTCA AACCGCTCAC
TCAAGTTTGG ATGACCATGT GGCACGTTGG TTTGGATTAA ATCAGTCAAA ATATCAGTGG GCTCTTGATG ATTATTATGA
GAGCAAGGGA ATGGAAAAAG GAGACATCAA AATGAAAGAG GTATCGAGCA AACTACAGAA TGTCTGA

>Vigan.01G480000.01
MPINAESTPP PVIGKIGPYT VFMTPPSTPK PSEDPSTATK IAPPPPQIPK TVPSPKPVSG SDDSLFGIFR NAVTKVQTAH
SSLDDHVARW FGLNQSKYQW ALDDYYESKG MEKGDIKMKE VSSKLQNV*