GBrowse Details

Vigan.01G479800.01

Basic Information:
Name: Vigan.01G479800.01
Multiple alignment
Variant Information
Position: Chr01:60877551..60882195 (+ strand)
Length: 4645
Functional Information:
Description: Similar to Uncharacterized protein. [I1LVQ4, Glycine max]
GO: Biological Process: protein phosphorylation (GO:0006468)
Molecular Function: protein kinase activity (GO:0004672)
Molecular Function: protein serine/threonine kinase activity (GO:0004674)
Molecular Function: ATP binding (GO:0005524)
Molecular Function: transferase activity, transferring phosphorus-containing groups (GO:0016772)
InterPro: Protein kinase domain (IPR000719)
Serine/threonine- / dual specificity protein kinase, catalytic domain (IPR002290)
Serine/threonine-protein kinase, active site (IPR008271)
Protein kinase-like domain (IPR011009)
Protein kinase, ATP binding site (IPR017441)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.07,0.23,11.36,18.40,6.34,6.46,41.80,19.82
Arabidopsis thaliana homolog: AT2G18890.1
Automatic updates:
Name: NM_001251670 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max protein kinase family protein (LOC100305398), mRNA.
PubMed ID: -
Status: Known Variant
Structure :
Position: Chr01:60877551..60878166 (+ strand)
Length: 616
Type: five_prime_UTR
Position: Chr01:60878167..60878362 (+ strand)
Length: 196
Type: CDS
Position: Chr01:60878443..60878697 (+ strand)
Length: 255
Type: CDS
Position: Chr01:60878842..60878999 (+ strand)
Length: 158
Type: CDS
Position: Chr01:60879122..60879201 (+ strand)
Length: 80
Type: CDS
Position: Chr01:60879308..60879443 (+ strand)
Length: 136
Type: CDS
Position: Chr01:60879599..60879748 (+ strand)
Length: 150
Type: CDS
Position: Chr01:60881555..60881722 (+ strand)
Length: 168
Type: CDS
Position: Chr01:60881723..60882195 (+ strand)
Length: 473
Type: three_prime_UTR

>Vigan.01G479800.01 class=Sequence position=Chr01:60877551..60882195 (+ strand)
TTTAATTATG TTATCCTTAA CTAGTTCTTA ACTTGAGTTG GAGAAATTAT TTAAGAAATT CACTTTCATT ACATCAGCAA
TGGAAGAAAT AGTCATGGAA CACGCATGTC TAACTTCTAG ATGGGATTAA GAATGACAGA GATATTTGAT AAACTTATGT
TACTATTACA TTTGTGAAAA GCACGGGTCA CTACTGGTGG CAATTAATTA GGTGAATTAA CAAGATTCAA AGCAAATTAA
GCAGAGAGGA AAGATAATAG GGGTGAGGCT ATCCTATAAG AACCAAAATC GCAACCTCTT TATTCAATCC ATATTTTTCT
TTCTTCGTAC TCTTCTCTCC ACAGTTTAAG TTTTCTTGCC ATTTGTATCT ACAAAAGTTA TCATAGCATA GCATGGATGG
TATTGGAGAA AAAGCATTTC AGCTTCTCTA ATGGTCCCTC CCTAGTACAA GGCACTTCTT CACACCACAA CTTTTCCGAA
GAAAACAAAA CCTAGGAGAG CGCTTGTGGT CTCTCTATGT ATGTGAGACC CAAACGTGGA GTTGCTTCTC TTGTTCTCTG
TTTTCAATTG CTCTGCTCTG CATGAAACAG AGTACCCTGT TGGATTGTTT TTTGCAATGA GGTATATTCG GAGCAACAGC
TTCAAGAGGT TCTTCTCCTT TGGAAGACGT AGTTCAAGGG AGCAAGTTCT GAGTCCTAAT GGTGGAGAAA GTCACGAGAC
TCTTCCGTCT AAAGAAGAGC CTTCTGGAAG ACCCTCTTGG AAGTGCTTCT CTTATGATGA TTTGTTTGAT GCCACAAATG
GCTTCAGCTC AGGTAATTCA GGTTTGGTTT GAAAAATTAA GTACCTTTTT TTTTTTGCTT TGTTAAAGTT TTTTTTTTTA
TTCTTGTGGC AGAAAATTTG GTTGGAAAGG GAGGGTATGC GGAAGTGTAC AAGGGGACAA TGAATGGGGG AGAAGAAATT
GCTGTGAAGA GACTCACAAG AACTTCGAGG GACGAGAGAA AGGAGAAAGA GTTTTTGACA GAGATTGGTA CAATTGGTCA
TGTGAACCAT TCCAATGTGT TGCCTCTTCT GGGGTGTTGT ATTGACAATG GCCTTTACCT TGTTTTTGAG TTATCTTCTA
GAGGTTCTGT TGCATCCCTT CTTCACGGTA ATTCCTAAAC CAACATCAGC CATAAACAAA TATTTTGTTT TCTCATAAAG
ATTGAAATTT TGGCAGCAAA AAATTGAATG CATTCTGGGT TTAACGAAAT AAAAATAAGG GTTTTTACCG GTGGATGGGT
TTTCTTTGTA GATGAAAAGT TGCCCCCTTT AGATTGGAAA ACGAGGCACA AGATAGCCAT TGGAACTGCT CGCGGCCTCC
ACTACTTGCA TAAGGGCTGC AAAAGGAGGA TAATCCACCG GGACATTAAG GCATCAAACA TTTTGTTAAC AAAGGATTTT
GAGCCACAGG TCCTTTTTTA ATCTGTATTA TAGTCACTTT TTCCATTTTA GTTGAATCAA TATTTCAAAC AAAGTTGTTT
TATGGGTTTA TTTTTACCGA AAGTATTGAT GATGTTTTAT GACCGTGGCA GATATCTGAT TTTGGACTAG CAAAATGGCT
TCCATCTCAG TGGACTCATC ATTCCATTGC CCCAATAGAA GGGACATTTG GGTACTCATC TTTCCATGGA CCCTTCAATG
ATAAACATGA TGGATAGTAT ATTTTAAATA AAATACATGA ATGGTTTGAA AATGGATATT TTTTGAACCT TTTGCAGACA
TTTGGCCCCA GAGTACTACT TGCATGGAGT TGTGGATGAG AAGACAGATG TGTTTGCCTT TGGTGTGTTC TTGCTGGAAG
TAATCTCTGG CAGAAAACCA GTGGATGGGT CACACCAAAG CTTACACAGC TGGGTAAGTA ATCCCTCTTT TTTCCTTTGT
GACTTTGTTC TGTGGTTATG AACTTGGCGT GTTACAAGAG AAATGCCTTT TGGTTTGTTT GGTCTGATGG TGGTTAAGTC
ACTATTAATT AACGCTATTA TCGGTAAACA TGCATTTTGA ACAAATAGGC CAAACCAATT TTGAACAAGG GTGGGATTGA
AGAGTTGGTA GATCCAAGGC TTGAAGGGAC TTATGATGTT ACACAGTTAA AAAGATTTTC CTTTGCTGCA TCTCTCTGCA
TTCGAGCTTC TTCGACTTGG CGACCCACCA TGACTGAGGT ACCTTACACT TCTTTCTTTC CCTTCTTTTA CCACAACAAT
ACACACATTA ACAAATCATT AATAAAACAA CTTACTGCTG TTGATATTTA TTCATATTAC ATCTTAAATA ATTCAATTTT
ATTACAAATT ATAAAAAACA CAAACAGACT TTATTTAATG AAAGCTAAGA GAAAGCACTT TTTGTTTTTT TAATATTTTT
TAAATAATAA TAAAGGGTAT ATTTTAAAGA TCCCTTTCTT ATTTATTTTT TTTGTTTTTT ATTTCTTTAT ATAGTATCTC
TGGAGGCATA TGTTTTAACA TATTTTATAT TGTTTATTTT GAAAAGGACA AGAATCTTTT TAAAAAATCG TTTTAATAGT
TGTAAAATAT TTCCTGAGCG TACTTTTTTA AGACTTATTT CCTCAAAATA GTAAAAAATG CTTAGTGGAC TTATACATTA
TTTCGTTATT AAAATAGATA AAAAAAGATT AAGAATTAAA CAAATGTTAA TATTTTTTTG AAAAACAATC TCATTAAATA
ATAACTCTTT TTGAATCTCT TTTGAATCTT GTGCAAGATA ATCATGAACA CCAGTAAAGA AGTATTTAAT ATACCATACT
AAATGATTTC AATTGCTTAA AGTTATTAAA TATGTTTTAT ATTATTTATA ATAAAATAAA CATTTTCAAA ATGCTTTTTA
TATTTAGTTT TCTCAACAAC ATCTTAAAGA CGATCCATAA CATTTGCAAA TAAATTGGTA TCTTGGTTGT TCTTTTCATC
AATGACTGGT ATAACCACCA CGATGTTTTG CACAAGTGAA ACACATTTGA TGTGTAGCAA AATTATATTG ATAAGTGACA
CTTGTCATTT TCTTTTTTAT TATTTGCCAA GTCAAATTTT ATTTTGACGT GATATTTTCT GTAGTACTAA CAACGCTTCC
AAGTAATTGA AAAAAAGTAT TATTATTGTT TAATAATTTT ATAGCGACTG TTATTCCTTT CAAGTAATAT TATTATATAT
TGTGTAGGGT TTATTAATTA TTATTATTAT TATTTGATAA GCAACTATTT ATTTATTGTT TAATTTTCTC AACGGCTGAA
TTTCTTGGTT GGGTTGAGTT AACCTTGGGA AGGATTGTGA AATTGTCACG TTATCTATTA TTAGCACGTG TAGCGTGTTC
ACCAGTCTCA TTATTGCGTT TTAGATAAGC CAGTTTCCAA GTTAGCAATA AACTATGCAT ATAAAGAACA GTTTCCTGGC
TTGAAAGTTC AAACAATCAA TTAACAAAAA TATAATAATA CCCTTTTTCA TTTATTTAAT TACGATGGCT TTCATCGTCA
TTCTCGGATA GATTCATCAT AATTTTCTTC CATGCAAATT CATCAATCAC TTGATGTTCT CTTCTACCTA ATTTTATCCC
TTTATGCTAA CACCGCGACA ACACACATAA TATATGCCAA TTCATATAAT GAAAATGTGT AACAGAAATC GATATATATG
TGTAGCTGAA ATTAAAAGAG AAAATAAATG CGTAGTTCTA TTAGGTTCCG TGTCAAATTC ATTGCAATTG TGGGCCACTT
GTTCTTATTG TGAATCACGC ACACAGCAAT GATAGTTGGC CGTATGCATT ACTGTCAGAA TTGAGAAAAG TTTTTGCATA
GCTTATGTGA ACAATGAGTC TGCTGTTGGA TGCCCATTGA AAGTAGAGCA CACTGACATC TATTATGTAT GATAAATTTA
TGAGCTTTTA GAAGTTATTG TAAAAGTTGT TGCACATGAT TGATGGTGTA GAAATATTGA AAAGAGTTAT TTATGAATTG
ACAGGTATTA GAGATAATGG AAGAGGGAGA AACAGATATG GAAAAGTGGA AAATGCCAGA AGAAGAAGAG GAGGAGGAAG
AAGAAGAATT CTGGGGATTT GAGGATCTGG AATATGAATA CGATAGCTCA TTTTCTATGT CATTACTTGA TTCCATTGGA
AGCACTGGTT AGGAATTAGA CGGTTGTTTG AAGTGTTTGT ATATATAGAA ATTTGATGGG TATTTGATAG TAATTGAATG
TCGGCAACTG GAGAGGAAAA TGACAGAGAA GGTTGTTCTG ATGCAGTAAT CAGTTTCAAT GATATGGTAG TTTTGTGAAA
CAAGGTATGA TGATTGGGTC CAAAATGTCT ACTCGCTGCA ATTTTTTCCA CATGATGTGA CTGAACTATC AATAATATGA
GGTTTTAAGC CGTTTAGACA GAGACATTCG AAAAAGATTG AGCTTGAAAT GATGCTTCAT GCTGTTCCAG GAAGGAGAGG
CCGTGATTTC GTGGATGATT TCAATTTGCA TCTTAATCAT ATTTTCATTC CTTTTATATA TATATATATA TATATATAGA
CCTTGAATTA AAATCACCAT GTTAGTAGCT CCAACATGCG GAAACTAGTG ATTGTATTTC ATCTTCTAAC ATAATAATCC
AGGAG

>Vigan.01G479800.01
TTTAATTATG TTATCCTTAA CTAGTTCTTA ACTTGAGTTG GAGAAATTAT TTAAGAAATT CACTTTCATT ACATCAGCAA
TGGAAGAAAT AGTCATGGAA CACGCATGTC TAACTTCTAG ATGGGATTAA GAATGACAGA GATATTTGAT AAACTTATGT
TACTATTACA TTTGTGAAAA GCACGGGTCA CTACTGGTGG CAATTAATTA GGTGAATTAA CAAGATTCAA AGCAAATTAA
GCAGAGAGGA AAGATAATAG GGGTGAGGCT ATCCTATAAG AACCAAAATC GCAACCTCTT TATTCAATCC ATATTTTTCT
TTCTTCGTAC TCTTCTCTCC ACAGTTTAAG TTTTCTTGCC ATTTGTATCT ACAAAAGTTA TCATAGCATA GCATGGATGG
TATTGGAGAA AAAGCATTTC AGCTTCTCTA ATGGTCCCTC CCTAGTACAA GGCACTTCTT CACACCACAA CTTTTCCGAA
GAAAACAAAA CCTAGGAGAG CGCTTGTGGT CTCTCTATGT ATGTGAGACC CAAACGTGGA GTTGCTTCTC TTGTTCTCTG
TTTTCAATTG CTCTGCTCTG CATGAAACAG AGTACCCTGT TGGATTGTTT TTTGCAATGA GGTATATTCG GAGCAACAGC
TTCAAGAGGT TCTTCTCCTT TGGAAGACGT AGTTCAAGGG AGCAAGTTCT GAGTCCTAAT GGTGGAGAAA GTCACGAGAC
TCTTCCGTCT AAAGAAGAGC CTTCTGGAAG ACCCTCTTGG AAGTGCTTCT CTTATGATGA TTTGTTTGAT GCCACAAATG
GCTTCAGCTC AGAAAATTTG GTTGGAAAGG GAGGGTATGC GGAAGTGTAC AAGGGGACAA TGAATGGGGG AGAAGAAATT
GCTGTGAAGA GACTCACAAG AACTTCGAGG GACGAGAGAA AGGAGAAAGA GTTTTTGACA GAGATTGGTA CAATTGGTCA
TGTGAACCAT TCCAATGTGT TGCCTCTTCT GGGGTGTTGT ATTGACAATG GCCTTTACCT TGTTTTTGAG TTATCTTCTA
GAGGTTCTGT TGCATCCCTT CTTCACGATG AAAAGTTGCC CCCTTTAGAT TGGAAAACGA GGCACAAGAT AGCCATTGGA
ACTGCTCGCG GCCTCCACTA CTTGCATAAG GGCTGCAAAA GGAGGATAAT CCACCGGGAC ATTAAGGCAT CAAACATTTT
GTTAACAAAG GATTTTGAGC CACAGATATC TGATTTTGGA CTAGCAAAAT GGCTTCCATC TCAGTGGACT CATCATTCCA
TTGCCCCAAT AGAAGGGACA TTTGGACATT TGGCCCCAGA GTACTACTTG CATGGAGTTG TGGATGAGAA GACAGATGTG
TTTGCCTTTG GTGTGTTCTT GCTGGAAGTA ATCTCTGGCA GAAAACCAGT GGATGGGTCA CACCAAAGCT TACACAGCTG
GGCCAAACCA ATTTTGAACA AGGGTGGGAT TGAAGAGTTG GTAGATCCAA GGCTTGAAGG GACTTATGAT GTTACACAGT
TAAAAAGATT TTCCTTTGCT GCATCTCTCT GCATTCGAGC TTCTTCGACT TGGCGACCCA CCATGACTGA GGTATTAGAG
ATAATGGAAG AGGGAGAAAC AGATATGGAA AAGTGGAAAA TGCCAGAAGA AGAAGAGGAG GAGGAAGAAG AAGAATTCTG
GGGATTTGAG GATCTGGAAT ATGAATACGA TAGCTCATTT TCTATGTCAT TACTTGATTC CATTGGAAGC ACTGGTTAGG
AATTAGACGG TTGTTTGAAG TGTTTGTATA TATAGAAATT TGATGGGTAT TTGATAGTAA TTGAATGTCG GCAACTGGAG
AGGAAAATGA CAGAGAAGGT TGTTCTGATG CAGTAATCAG TTTCAATGAT ATGGTAGTTT TGTGAAACAA GGTATGATGA
TTGGGTCCAA AATGTCTACT CGCTGCAATT TTTTCCACAT GATGTGACTG AACTATCAAT AATATGAGGT TTTAAGCCGT
TTAGACAGAG ACATTCGAAA AAGATTGAGC TTGAAATGAT GCTTCATGCT GTTCCAGGAA GGAGAGGCCG TGATTTCGTG
GATGATTTCA ATTTGCATCT TAATCATATT TTCATTCCTT TTATATATAT ATATATATAT ATATAGACCT TGAATTAAAA
TCACCATGTT AGTAGCTCCA ACATGCGGAA ACTAGTGATT GTATTTCATC TTCTAACATA ATAATCCAGG AG

>Vigan.01G479800.01
ATGAGGTATA TTCGGAGCAA CAGCTTCAAG AGGTTCTTCT CCTTTGGAAG ACGTAGTTCA AGGGAGCAAG TTCTGAGTCC
TAATGGTGGA GAAAGTCACG AGACTCTTCC GTCTAAAGAA GAGCCTTCTG GAAGACCCTC TTGGAAGTGC TTCTCTTATG
ATGATTTGTT TGATGCCACA AATGGCTTCA GCTCAGAAAA TTTGGTTGGA AAGGGAGGGT ATGCGGAAGT GTACAAGGGG
ACAATGAATG GGGGAGAAGA AATTGCTGTG AAGAGACTCA CAAGAACTTC GAGGGACGAG AGAAAGGAGA AAGAGTTTTT
GACAGAGATT GGTACAATTG GTCATGTGAA CCATTCCAAT GTGTTGCCTC TTCTGGGGTG TTGTATTGAC AATGGCCTTT
ACCTTGTTTT TGAGTTATCT TCTAGAGGTT CTGTTGCATC CCTTCTTCAC GATGAAAAGT TGCCCCCTTT AGATTGGAAA
ACGAGGCACA AGATAGCCAT TGGAACTGCT CGCGGCCTCC ACTACTTGCA TAAGGGCTGC AAAAGGAGGA TAATCCACCG
GGACATTAAG GCATCAAACA TTTTGTTAAC AAAGGATTTT GAGCCACAGA TATCTGATTT TGGACTAGCA AAATGGCTTC
CATCTCAGTG GACTCATCAT TCCATTGCCC CAATAGAAGG GACATTTGGA CATTTGGCCC CAGAGTACTA CTTGCATGGA
GTTGTGGATG AGAAGACAGA TGTGTTTGCC TTTGGTGTGT TCTTGCTGGA AGTAATCTCT GGCAGAAAAC CAGTGGATGG
GTCACACCAA AGCTTACACA GCTGGGCCAA ACCAATTTTG AACAAGGGTG GGATTGAAGA GTTGGTAGAT CCAAGGCTTG
AAGGGACTTA TGATGTTACA CAGTTAAAAA GATTTTCCTT TGCTGCATCT CTCTGCATTC GAGCTTCTTC GACTTGGCGA
CCCACCATGA CTGAGGTATT AGAGATAATG GAAGAGGGAG AAACAGATAT GGAAAAGTGG AAAATGCCAG AAGAAGAAGA
GGAGGAGGAA GAAGAAGAAT TCTGGGGATT TGAGGATCTG GAATATGAAT ACGATAGCTC ATTTTCTATG TCATTACTTG
ATTCCATTGG AAGCACTGGT TAG

>Vigan.01G479800.01
MRYIRSNSFK RFFSFGRRSS REQVLSPNGG ESHETLPSKE EPSGRPSWKC FSYDDLFDAT NGFSSENLVG KGGYAEVYKG
TMNGGEEIAV KRLTRTSRDE RKEKEFLTEI GTIGHVNHSN VLPLLGCCID NGLYLVFELS SRGSVASLLH DEKLPPLDWK
TRHKIAIGTA RGLHYLHKGC KRRIIHRDIK ASNILLTKDF EPQISDFGLA KWLPSQWTHH SIAPIEGTFG HLAPEYYLHG
VVDEKTDVFA FGVFLLEVIS GRKPVDGSHQ SLHSWAKPIL NKGGIEELVD PRLEGTYDVT QLKRFSFAAS LCIRASSTWR
PTMTEVLEIM EEGETDMEKW KMPEEEEEEE EEEFWGFEDL EYEYDSSFSM SLLDSIGSTG *