GBrowse Details

Vigan.01G435800.01

Basic Information:
Name: Vigan.01G435800.01
Multiple alignment
Variant Information
Position: Chr01:56930590..56933655 (+ strand)
Length: 3066
Functional Information:
Description: Similar to Lactoylglutathione lyase / glyoxalase I family protein. [XP_007023869.1, Theobroma cacao]
InterPro: Glyoxalase-like domain (IPR025870)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:167.50,101.00,3.86,0.29,0.44,1.44,6.60,0.47
Automatic updates:
Name: NM_001249520 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase (GLYI-19), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Name: NM_001353888 NCBI(nuccore)
Organism: Glycine max
Description: Glycine max putative lactoylglutathione lyase (GLYI-24), mRNA.
PubMed ID: 27083416 NCBI(pubmed)
Status: Known Variant
Structure :
Position: Chr01:56930590..56931048 (+ strand)
Length: 459
Type: five_prime_UTR
Position: Chr01:56931049..56931191 (+ strand)
Length: 143
Type: CDS
Position: Chr01:56931369..56931474 (+ strand)
Length: 106
Type: CDS
Position: Chr01:56931567..56931821 (+ strand)
Length: 255
Type: CDS
Position: Chr01:56931822..56933655 (+ strand)
Length: 1834
Type: three_prime_UTR

>Vigan.01G435800.01 class=Sequence position=Chr01:56930590..56933655 (+ strand)
CAGTTATCTG CGTTTGAATT GCAAGTTTCT CAATACTTAT CCGCAGTTTG AGCAATGACA TGTTTTTGTC CGCTACAAAA
AGTAATAGAC TAGGTCACTA CGACACACAC AAACTAACGT GTCGGTGAAA CAAGATAAGT GTTACTTGCT GTCTGGTCCT
GATTCATCAA CAAGAAATCT ACGTGTAACC AAATCGTTGT CTGAATCCAA TCCCAACTTC AAACACGAAA CTTCTAAAAC
ATGCAGGAAA AAATATTTGC ATATCCCTAA CAACCCACTA TAAATAGAAG CACGCATAAC ATAGGCCAAC CTCGTTTTTC
TCTATCTTAT CGACAACATT CTTCGATACG CTTGAAACTA ATTTCTGCAC CGCCATATAC CTCTCAGAAG AACCACTTTC
TCATCTTCTT TCTTCTTAAC TGTTTTGCTG ATTGATAGAA CCCAAAAGGG ACAGAAGGAA TGTCGAACCC TCTGCAACTC
AAGTCATTGA ATCATATCTC ACTTGTGTGT GCATCACTGG AGAAGTCCGT TGAGTTTTAC GTAAACGTTC TCGGGTTTTC
TCCTGTTAAA AGACCTACTT CGTTAGACTT CAATGGTGCA TGGTAAGCTT AATCATTTGT ATTACTGTGA GCATATATCA
TTGCAAAAAT TTGACAGAAA CTTTGGTTAA TTCAATATGC TCTTAACTAA AGCTAAAGCC AAAGCATATG AAACAGAAAT
TTGCATAGAA ATTGAATATA CTGATTAATT GCCTTTTTGT TTGATATTGA TCCTGGTAGG TTATTCAATT ATGGCATTGG
GATACACCTT CTCCAATCAG AAGAGCCACG AGGCATGCCC AAAACTACTC CCATTAATCC TAAGGACAAC CACATTTCTT
TCCAAGTATT TTTCTCTCTT CCTGTGCCAT TTCAACTTTG ATGCATAGTC TTTAATACAT ATAATATACT TAACGAAGGA
ATTATGCATT GTTGCAGTGT GAAAGTACAG CAGCTGTGGA GAAAAGACTG CAGCAAATGG AGATAGAGTA CGTGAAGAGC
AGAGTAGAGG AAAGCGGAAT CTACGTTGAT CAGCTATTCT TCCATGACCC AGATGGCATG ATGATCGAAA TCTGCAACTG
TGATAACATC CCTATGGTGC CTTTATCAGA GGACAAACTA TGGTCATGCT CTCGCTTCAA TTGCAATATT CCAAACCGAC
AGCGCCAGAT TCAGCAAATG ATCCCTATGT AGTACTAAGT TTCAAACACT TGCAATGTCA TGTCTGCCTG TACAAAATTA
TCGCTTGTAA ATTATGTTGT ATGTTAGTAA TTGTAATAAA ATTTTCTTCA TGATAGTAAA AATCTTTCTT CAACGTTTTT
GTCGTTTACC GAGCTGTTAT AGTACCTGCA ACACCATCAC CTATCTTCAG TGGTCTGGAC TGCGCGTGAA CTGATAACCC
ATTTACTCCT AGCAGTCTAA GATCACAGTT TCTGATAGGT TGTGAACTCC TTGATATAAT TATACGTAAA GATTTATACT
TTACAATAAT TTTTCTGCCT AATGCCCGAG TTCCAGTCTC ATGAATTGAA CGTGTAAATT CATTCATTTT CTTCAAGGAA
TTTTAAAAAA ATTGCTTTCA GGATGTAACA TGTTCCGACA ATAATTTAGA CAGCTTAACT AACAACTTTT TTTATGCAAC
TGAGAAAAAT TATACGTTTT TACGTTAACT GAGTCAGAAA CTCGCAAAAA TTAAATGTAT AAGTTTATAA CCTTTTTGGA
GACTACTTAC AAAAACGAGC AAGTTAGATA TAAACTATGA TTTCCAATAA TAATTTGCTA TAACAGATCA GGAAGAAAAA
ACATTAGTGT ATTTATACTA AGTGTTCTTT TTAAAATCTT TTGAAAATCG AGTTTAAGAA TGAATTTGAC CAAATTTAAA
ATTATAAAAG AAGAAAATAC GGAAGAGGAG TATGAGAAAA CAGTTTTATT TATACCAAGT GTTTATTAAA TCTATTGCAA
ACTAAGTTCA GGAATAAGTT TAGACCAAAT CTCTGCAGGA TCAGATCAAA TTAAATTTGT TTTAATAACC ACTAAAAAGT
TTTAAGAAGA TTTTTCAGTT TAATAAAATT TGAAATCTGC AACATTTACC CTTCAAATCT AGTTGTCCAA AGCGAGGTTG
ATTAAACCTT AATTAGTGTC TCAACCCGAT GATTGCAGAG AGAAATAAAC TATAATTTTG GGAAATTATA ATAGAGAAGG
TTACTGCACA CGATGTGTAT ATTTTTAAGG AATTAAGGTG TATGAAGAAA TGAGTTTAAA TAACAACTGG TGTAGTTCTT
GAACAACAAG GATTTCGTGG CAAACACCCT ACACATCCAG TAAGACCAAA ATAAAATAGA CAGAGAAATA TATCTGTCTT
TTTATATTTT TTTTTCTCAA TAATTGAATG AATTTGGATA CACAAAAAGT AGAATTTCTC AAATTAAAAG TTCTCGAAGA
TGTAAAGAAG AATGCTTAGC AACTGGGAAG CTCTCTGTAT TTGAAAATAA AACAATTGGG GTAGCATACC ATGGAGAAAC
AGTTCAATAC CGATCCTTTA ATAGCTTTGG TTATGCCACT CATGTTGAAG CATATTCAAC AAATAGTGAA GATGTTAAAA
GAAAAATAAG TTTGACAGAA GCGTAGGAAT ATAAAAGGCA AAAGAAAAGA TAAATTTGAT TCAGAAATTT TCTGAAATTA
AATATTGGAT CGGTAAAAGA TCCCTTTGTG ATGGAATCTG CAAGATGAAA AAGGATACTG AGGAAATATT TAGTTTTTAC
CTTTGCAAAG GAATTGAAAG CTGAAAAAGG GTGAAAATAG TTGAATGAAG GAAAGGTTTG AGGTTGATAG AGGAAAGTGA
AGAAGAAGGA GCTCCCTTCA GTCCAAAACA GCATGAAGTT GATGCAGAGG GTGTTTTGGG CTGCAAGAGA ACTCCTATTT
CTGCATCTTT CACAGATGAA CAAACAGGAA TGAATGAGAG TGTAGGTAAG AAGGAAAAGA AGGTCCTTTA TAAGCACTTT
TCCTTCGATT CAATTAATGG TCAAAA

>Vigan.01G435800.01
CAGTTATCTG CGTTTGAATT GCAAGTTTCT CAATACTTAT CCGCAGTTTG AGCAATGACA TGTTTTTGTC CGCTACAAAA
AGTAATAGAC TAGGTCACTA CGACACACAC AAACTAACGT GTCGGTGAAA CAAGATAAGT GTTACTTGCT GTCTGGTCCT
GATTCATCAA CAAGAAATCT ACGTGTAACC AAATCGTTGT CTGAATCCAA TCCCAACTTC AAACACGAAA CTTCTAAAAC
ATGCAGGAAA AAATATTTGC ATATCCCTAA CAACCCACTA TAAATAGAAG CACGCATAAC ATAGGCCAAC CTCGTTTTTC
TCTATCTTAT CGACAACATT CTTCGATACG CTTGAAACTA ATTTCTGCAC CGCCATATAC CTCTCAGAAG AACCACTTTC
TCATCTTCTT TCTTCTTAAC TGTTTTGCTG ATTGATAGAA CCCAAAAGGG ACAGAAGGAA TGTCGAACCC TCTGCAACTC
AAGTCATTGA ATCATATCTC ACTTGTGTGT GCATCACTGG AGAAGTCCGT TGAGTTTTAC GTAAACGTTC TCGGGTTTTC
TCCTGTTAAA AGACCTACTT CGTTAGACTT CAATGGTGCA TGGTTATTCA ATTATGGCAT TGGGATACAC CTTCTCCAAT
CAGAAGAGCC ACGAGGCATG CCCAAAACTA CTCCCATTAA TCCTAAGGAC AACCACATTT CTTTCCAATG TGAAAGTACA
GCAGCTGTGG AGAAAAGACT GCAGCAAATG GAGATAGAGT ACGTGAAGAG CAGAGTAGAG GAAAGCGGAA TCTACGTTGA
TCAGCTATTC TTCCATGACC CAGATGGCAT GATGATCGAA ATCTGCAACT GTGATAACAT CCCTATGGTG CCTTTATCAG
AGGACAAACT ATGGTCATGC TCTCGCTTCA ATTGCAATAT TCCAAACCGA CAGCGCCAGA TTCAGCAAAT GATCCCTATG
TAGTACTAAG TTTCAAACAC TTGCAATGTC ATGTCTGCCT GTACAAAATT ATCGCTTGTA AATTATGTTG TATGTTAGTA
ATTGTAATAA AATTTTCTTC ATGATAGTAA AAATCTTTCT TCAACGTTTT TGTCGTTTAC CGAGCTGTTA TAGTACCTGC
AACACCATCA CCTATCTTCA GTGGTCTGGA CTGCGCGTGA ACTGATAACC CATTTACTCC TAGCAGTCTA AGATCACAGT
TTCTGATAGG TTGTGAACTC CTTGATATAA TTATACGTAA AGATTTATAC TTTACAATAA TTTTTCTGCC TAATGCCCGA
GTTCCAGTCT CATGAATTGA ACGTGTAAAT TCATTCATTT TCTTCAAGGA ATTTTAAAAA AATTGCTTTC AGGATGTAAC
ATGTTCCGAC AATAATTTAG ACAGCTTAAC TAACAACTTT TTTTATGCAA CTGAGAAAAA TTATACGTTT TTACGTTAAC
TGAGTCAGAA ACTCGCAAAA ATTAAATGTA TAAGTTTATA ACCTTTTTGG AGACTACTTA CAAAAACGAG CAAGTTAGAT
ATAAACTATG ATTTCCAATA ATAATTTGCT ATAACAGATC AGGAAGAAAA AACATTAGTG TATTTATACT AAGTGTTCTT
TTTAAAATCT TTTGAAAATC GAGTTTAAGA ATGAATTTGA CCAAATTTAA AATTATAAAA GAAGAAAATA CGGAAGAGGA
GTATGAGAAA ACAGTTTTAT TTATACCAAG TGTTTATTAA ATCTATTGCA AACTAAGTTC AGGAATAAGT TTAGACCAAA
TCTCTGCAGG ATCAGATCAA ATTAAATTTG TTTTAATAAC CACTAAAAAG TTTTAAGAAG ATTTTTCAGT TTAATAAAAT
TTGAAATCTG CAACATTTAC CCTTCAAATC TAGTTGTCCA AAGCGAGGTT GATTAAACCT TAATTAGTGT CTCAACCCGA
TGATTGCAGA GAGAAATAAA CTATAATTTT GGGAAATTAT AATAGAGAAG GTTACTGCAC ACGATGTGTA TATTTTTAAG
GAATTAAGGT GTATGAAGAA ATGAGTTTAA ATAACAACTG GTGTAGTTCT TGAACAACAA GGATTTCGTG GCAAACACCC
TACACATCCA GTAAGACCAA AATAAAATAG ACAGAGAAAT ATATCTGTCT TTTTATATTT TTTTTTCTCA ATAATTGAAT
GAATTTGGAT ACACAAAAAG TAGAATTTCT CAAATTAAAA GTTCTCGAAG ATGTAAAGAA GAATGCTTAG CAACTGGGAA
GCTCTCTGTA TTTGAAAATA AAACAATTGG GGTAGCATAC CATGGAGAAA CAGTTCAATA CCGATCCTTT AATAGCTTTG
GTTATGCCAC TCATGTTGAA GCATATTCAA CAAATAGTGA AGATGTTAAA AGAAAAATAA GTTTGACAGA AGCGTAGGAA
TATAAAAGGC AAAAGAAAAG ATAAATTTGA TTCAGAAATT TTCTGAAATT AAATATTGGA TCGGTAAAAG ATCCCTTTGT
GATGGAATCT GCAAGATGAA AAAGGATACT GAGGAAATAT TTAGTTTTTA CCTTTGCAAA GGAATTGAAA GCTGAAAAAG
GGTGAAAATA GTTGAATGAA GGAAAGGTTT GAGGTTGATA GAGGAAAGTG AAGAAGAAGG AGCTCCCTTC AGTCCAAAAC
AGCATGAAGT TGATGCAGAG GGTGTTTTGG GCTGCAAGAG AACTCCTATT TCTGCATCTT TCACAGATGA ACAAACAGGA
ATGAATGAGA GTGTAGGTAA GAAGGAAAAG AAGGTCCTTT ATAAGCACTT TTCCTTCGAT TCAATTAATG GTCAAAA

>Vigan.01G435800.01
ATGTCGAACC CTCTGCAACT CAAGTCATTG AATCATATCT CACTTGTGTG TGCATCACTG GAGAAGTCCG TTGAGTTTTA
CGTAAACGTT CTCGGGTTTT CTCCTGTTAA AAGACCTACT TCGTTAGACT TCAATGGTGC ATGGTTATTC AATTATGGCA
TTGGGATACA CCTTCTCCAA TCAGAAGAGC CACGAGGCAT GCCCAAAACT ACTCCCATTA ATCCTAAGGA CAACCACATT
TCTTTCCAAT GTGAAAGTAC AGCAGCTGTG GAGAAAAGAC TGCAGCAAAT GGAGATAGAG TACGTGAAGA GCAGAGTAGA
GGAAAGCGGA ATCTACGTTG ATCAGCTATT CTTCCATGAC CCAGATGGCA TGATGATCGA AATCTGCAAC TGTGATAACA
TCCCTATGGT GCCTTTATCA GAGGACAAAC TATGGTCATG CTCTCGCTTC AATTGCAATA TTCCAAACCG ACAGCGCCAG
ATTCAGCAAA TGATCCCTAT GTAG

>Vigan.01G435800.01
MSNPLQLKSL NHISLVCASL EKSVEFYVNV LGFSPVKRPT SLDFNGAWLF NYGIGIHLLQ SEEPRGMPKT TPINPKDNHI
SFQCESTAAV EKRLQQMEIE YVKSRVEESG IYVDQLFFHD PDGMMIEICN CDNIPMVPLS EDKLWSCSRF NCNIPNRQRQ
IQQMIPM*