GBrowse Details

Vigan.01G408100.01

Basic Information:
Name: Vigan.01G408100.01
Multiple alignment
Variant Information
Position: Chr01:54594015..54596623 (+ strand)
Length: 2609
Functional Information:
Description: Similar to rac-like GTP-binding protein ARAC10-like. [XP_004501950.1, Cicer arietinum]
GO: Biological Process: GTP catabolic process (GO:0006184)
Biological Process: signal transduction (GO:0007165)
Biological Process: small GTPase mediated signal transduction (GO:0007264)
Biological Process: protein transport (GO:0015031)
Cellular Component: intracellular (GO:0005622)
Cellular Component: membrane (GO:0016020)
Molecular Function: GTPase activity (GO:0003924)
Molecular Function: GTP binding (GO:0005525)
InterPro: Small GTPase superfamily (IPR001806)
Small GTPase superfamily, Rho type (IPR003578)
Small GTPase superfamily, Rab type (IPR003579)
Small GTP-binding protein domain (IPR005225)
Small GTPase superfamily, Ras type (IPR020849)
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
Expression level (FPKM): Co,Em,Fl,Le,No,Po,Ro,St:0.00,0.12,1.49,0.71,0.29,0.00,1.03,5.78
Structure :
Position: Chr01:54594015..54594287 (+ strand)
Length: 273
Type: five_prime_UTR
Position: Chr01:54594288..54594392 (+ strand)
Length: 105
Type: CDS
Position: Chr01:54594673..54594760 (+ strand)
Length: 88
Type: CDS
Position: Chr01:54595066..54595175 (+ strand)
Length: 110
Type: CDS
Position: Chr01:54595434..54595497 (+ strand)
Length: 64
Type: CDS
Position: Chr01:54595697..54595761 (+ strand)
Length: 65
Type: CDS
Position: Chr01:54595841..54595906 (+ strand)
Length: 66
Type: CDS
Position: Chr01:54596361..54596534 (+ strand)
Length: 174
Type: CDS
Position: Chr01:54596535..54596623 (+ strand)
Length: 89
Type: three_prime_UTR

>Vigan.01G408100.01 class=Sequence position=Chr01:54594015..54596623 (+ strand)
TTATGATACA TTATGTCATC TTCATGGTTT AACTGTCGAA TTTAATTTCC CCAAAGCCGA AAAATAAGGC AACCGAACAT
CAAAGATTGT ACAAGCTGTT TCAGAAAAGA AAGGGACAGC AGAATCATGT GAAGTGCCGC CACATACACA CACATTCACT
CACTCTCCTT CTCTCTCTCC CAACCAATCA CTTAAATTCA ACCAAAACAC ACCTTTTCTG AGAACTTGTT GCTGTTGTTC
TGTTGTTGGG GTGTTGGCAC CAATTCGAGT TCAATGGCAG CAACAGCTTC GAGGTTCATC AAGTGTGTCA CAGTTGGGGA
TGGAGCTGTA GGCAAAACTA GCATGCTCAT TTGCTATACA AGCAACAAAT TCCCCACGGT ATCAACTCTT TGCTGGCTAT
CTTTTAGCTA CAGTTATGCT TCTTGATGAT ATCAATATTA TATTTCATGA AATCAATGTC TCTCATTTTC ATGCATTCTG
GTTGGGGGAG AAGGGAATTC TCTAGTTCTC TTTGAAAGGA CTAAACTTTT TCATGTGGGT TGTTCCTTAA TATCTTGTTT
CAGTTGAATT TCTCTGCCTT TAGTTTTTGG TGTCTAATTT TTTCCTTTTG CCCCCTATGG TTTGTATATT TGATTGGGGG
ATGTTTGGCT ATTATCAGGA CTATGTTCCA ACAGTGTTTG ATAATTTCAG TGCAAATGTG GTTGTTGAAG GCACAACTGT
CAATTTAGGC CTCTGGGATA CTGCAGGTAT GTTTACACAG ACTTGTCAAT TTTTGTATAT CATATACATT TTATATGTAG
AGTGGTTAGG AGTGTAAGAG ATGAGAGTAG TTACCCGTGA CTATTCAATG TTGCATTGAT GAACAAGACT GGTTTTTCTG
ACCTTAGAGC ATACCAGATA AAATCAATTT ACATTATACA AGTTTGAACA AGTTTCACTT TCTTAACTCT ATTTTATAAG
ATTAAGTTAA ATTTAAATTT TATTTTTCAG TTTATGCAAT TTAATTTCTT ATTAGCCTGC ATGAATTTTG TGATATCCAA
TGTGTCATTA GGTCAAGAGG ATTACAACAG GCTGAGGCCT TTGAGCTACA GGGGGGCAGA TGTCTTTGTC CTGGCTTTCT
CTTTAGTTAG TCATGCAAGC TACGAAAATG TGTTGAAGAA GGTATTATAG GTTCTCAGCT ATGTTATTCA TTGCTTCTTG
AAACTGGATT GGTTATTCAA CGGGATTAAA TTGTAGTTGA ATGGTATTAA TAAAGTATTC ATAACGCTAC AAAAACACTT
CTACTTAATA ATTAAGTTTA AGTTTTAACA AAAGTACTAT AATATAAATT TCATATCACA AAATTCATGC AGGCTAATAA
GAAATTAACA ATATTACTGG TTTCTCTTGC ATTTTCTAAT TTATATATAC ACATTTCAGT GGGTTCCTGA ACTGCAGCAT
TTTGCTCCTG GCATCCCAGT GGTGCTAGTT GGCACCAAAT TGGGTAAGTC TCAAAAAACT GGTCTTGCAA TCTGTCTCCA
TCATATACAT TCTATCATCT ATTTTCAGTT TTTTTTTTTT TTGTGATGCC CATTTTGTTC ATAAGGCCTC CTTTGCTTAA
TGCTGTTAAG ATTTTATCTG TTCAACCACA ACCCATCTAT ATAGATTCTG CATATAATGC TGTATTTATG GTAATCTTGA
AGATCTCCGA GAAGATAAGC ACTATTTGGC TGAGCATCCT GGCCTGGTGG CTGTGACTTC TGAGCAAGTA CAATTTCTTA
CTCTATCAGC CACCTAAAAA ATTCAATAGA CAGTGTTGAT TGAAACTGTT GGTTTTTTTT TATCAGGGTG AGGAATTGCG
TAAACTAGTA GGAGCTACAT ATTATATTGA GTGCAGCTCA AAAACTCAGC AGGTATGTTT ATTCTATCAG TTAGGTACAA
TACTTGATCA TTGTAGTGGG AAATGCAAGC CTGTGGCAGC ATTTCTTTTA GATAACTTTA ATCATAGTAT TAATGAATTA
AAAAATTTGA TTCTTGGGAA AGATCGATAA TGGCAATGAT CCATTTGGCT GAGGTGGCTG GTGAGAAAGC TTAGTTGTTG
TGTGTGGAAA AAGTTAAGTC AATTATGTTA TGGGACCGTA GTATCAGTTG TCCTTTGATT TCTAAACTCT AAGGAAATTT
AGTTCTCTGA AGAGAATATG CGAAAGAAGG AACCGACCCT AATGATAGGT TTGGAATTGA AATATCTGCA ATAATAAAGC
CATGCTTCAG AAAACAATGT TTGCCACTTT TGCAGATAAA TAATAGTGAC TGTTATTTCT GAAATTCTTC TGCAAATGAC
CCCATTGTCA ATGCAATTAA TTGCAGAACG TGAAGTCAGT TTTTGATGCA GCTATCAAGG TGGTCATCAA GCCTCCACAA
AAACAAGAGA AGAAGAAAAA ACCACGTCGA GGGTGTCTTC TGTTAGTAGA CTTTTTTCAT ATCATAATAA CTCCTGCACG
TCAAACTTTC TTTCTTGTGA AAAGGGATAT AGATCATTAA TGTTTAGCAC TGTTCACTGT CAAAATTTTC AATACATGTG
ATGTAACTTC ACAAGGTATT CAACTGAACG TTCTAATAAA AAAACATTA

>Vigan.01G408100.01
TTATGATACA TTATGTCATC TTCATGGTTT AACTGTCGAA TTTAATTTCC CCAAAGCCGA AAAATAAGGC AACCGAACAT
CAAAGATTGT ACAAGCTGTT TCAGAAAAGA AAGGGACAGC AGAATCATGT GAAGTGCCGC CACATACACA CACATTCACT
CACTCTCCTT CTCTCTCTCC CAACCAATCA CTTAAATTCA ACCAAAACAC ACCTTTTCTG AGAACTTGTT GCTGTTGTTC
TGTTGTTGGG GTGTTGGCAC CAATTCGAGT TCAATGGCAG CAACAGCTTC GAGGTTCATC AAGTGTGTCA CAGTTGGGGA
TGGAGCTGTA GGCAAAACTA GCATGCTCAT TTGCTATACA AGCAACAAAT TCCCCACGGA CTATGTTCCA ACAGTGTTTG
ATAATTTCAG TGCAAATGTG GTTGTTGAAG GCACAACTGT CAATTTAGGC CTCTGGGATA CTGCAGGTCA AGAGGATTAC
AACAGGCTGA GGCCTTTGAG CTACAGGGGG GCAGATGTCT TTGTCCTGGC TTTCTCTTTA GTTAGTCATG CAAGCTACGA
AAATGTGTTG AAGAAGTGGG TTCCTGAACT GCAGCATTTT GCTCCTGGCA TCCCAGTGGT GCTAGTTGGC ACCAAATTGG
ATCTCCGAGA AGATAAGCAC TATTTGGCTG AGCATCCTGG CCTGGTGGCT GTGACTTCTG AGCAAGGTGA GGAATTGCGT
AAACTAGTAG GAGCTACATA TTATATTGAG TGCAGCTCAA AAACTCAGCA GAACGTGAAG TCAGTTTTTG ATGCAGCTAT
CAAGGTGGTC ATCAAGCCTC CACAAAAACA AGAGAAGAAG AAAAAACCAC GTCGAGGGTG TCTTCTGTTA GTAGACTTTT
TTCATATCAT AATAACTCCT GCACGTCAAA CTTTCTTTCT TGTGAAAAGG GATATAGATC ATTAATGTTT AGCACTGTTC
ACTGTCAAAA TTTTCAATAC ATGTGATGTA ACTTCACAAG GTATTCAACT GAACGTTCTA ATAAAAAAAC ATTA

>Vigan.01G408100.01
ATGGCAGCAA CAGCTTCGAG GTTCATCAAG TGTGTCACAG TTGGGGATGG AGCTGTAGGC AAAACTAGCA TGCTCATTTG
CTATACAAGC AACAAATTCC CCACGGACTA TGTTCCAACA GTGTTTGATA ATTTCAGTGC AAATGTGGTT GTTGAAGGCA
CAACTGTCAA TTTAGGCCTC TGGGATACTG CAGGTCAAGA GGATTACAAC AGGCTGAGGC CTTTGAGCTA CAGGGGGGCA
GATGTCTTTG TCCTGGCTTT CTCTTTAGTT AGTCATGCAA GCTACGAAAA TGTGTTGAAG AAGTGGGTTC CTGAACTGCA
GCATTTTGCT CCTGGCATCC CAGTGGTGCT AGTTGGCACC AAATTGGATC TCCGAGAAGA TAAGCACTAT TTGGCTGAGC
ATCCTGGCCT GGTGGCTGTG ACTTCTGAGC AAGGTGAGGA ATTGCGTAAA CTAGTAGGAG CTACATATTA TATTGAGTGC
AGCTCAAAAA CTCAGCAGAA CGTGAAGTCA GTTTTTGATG CAGCTATCAA GGTGGTCATC AAGCCTCCAC AAAAACAAGA
GAAGAAGAAA AAACCACGTC GAGGGTGTCT TCTGTTAGTA GACTTTTTTC ATATCATAAT AACTCCTGCA CGTCAAACTT
TCTTTCTTGT GAAAAGGGAT ATAGATCATT AA

>Vigan.01G408100.01
MAATASRFIK CVTVGDGAVG KTSMLICYTS NKFPTDYVPT VFDNFSANVV VEGTTVNLGL WDTAGQEDYN RLRPLSYRGA
DVFVLAFSLV SHASYENVLK KWVPELQHFA PGIPVVLVGT KLDLREDKHY LAEHPGLVAV TSEQGEELRK LVGATYYIEC
SSKTQQNVKS VFDAAIKVVI KPPQKQEKKK KPRRGCLLLV DFFHIIITPA RQTFFLVKRD IDH*